Export data of 12S rRNA gene for order Rodentia

Species (N=27) GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Acomys cahirinus 38.5 61.5 203 161 218 364 5.9
Apodemus peninsulae 35.2 64.8 181 155 258 360 4.4
Callosciurus erythraeus 41.1 58.9 223 175 236 335 17.0
Castor canadensis 40.9 59.1 201 156 204 311 23.4
Cavia porcellus 41.1 58.9 206 182 224 331 12.0
Chinchilla lanigera 41.1 58.9 228 164 208 354 17.2
Cynomys ludovicianus 38.3 61.7 207 163 245 351 11.0
Heterocephalus glaber 39.7 60.3 211 173 228 355 31.0
Ictidomys tridecemlineatus 38.0 62.0 198 168 257 341 7.9
Jaculus jaculus 41.8 58.2 222 183 241 322 7.3
Meriones unguiculatus 40.9 59.1 220 171 233 333 6.3
Mesocricetus auratus 38.3 61.7 199 167 249 340 3.9
Mus musculus 35.8 64.2 188 154 252 361 4.0
Nannospalax ehrenbergi 39.1 60.9 204 170 223 360 20.2
Octodon degus 38.5 61.5 206 161 233 353 14.0
Petaurista alborufus 42.4 57.6 242 170 236 323 21.4
Pseudomys chapmani 37.0 63.0 197 156 230 370 6.8
Pteromys volans 38.7 61.3 211 163 247 345 11.4
Rattus fuscipes 38.3 61.7 212 156 233 360 5.3
Rattus lutreolus 38.5 61.5 213 157 231 361 4.4
Rattus norvegicus 38.2 61.8 204 162 242 350 3.8
Rattus rattus 38.3 61.7 203 163 238 352 4.2
Ratufa bicolor 43.7 56.3 236 187 227 318 19.0
Sciurus vulgaris 39.1 60.9 213 165 252 337 14.8
Spalacopus cyanus 37.8 62.2 207 154 223 370 10.8
Tamias sibiricus 39.4 60.6 211 169 240 345 9.6
Thryonomys swinderianus 39.2 60.8 211 170 238 352 5.4
Export data
Other sections:
Total mtDNA
Total protein-coding genes
D-loop
Total tRNA-coding genes
Total rRNA-coding genes
ATP6
ATP8
COX1
COX2
COX3
CYTB
ND1
ND2
ND3
ND4
ND4L
ND5
ND6
16S rRNA gene
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.