Stats for family Agamidae
Species in family:
| Stats for total mtDNA (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 43.0 | 57.0 | 5004 | 2206 | 4018 | 5523 | 12.0 |
| Calotes versicolor | 40.3 | 59.7 | 4497 | 2214 | 4331 | 5628 | 5.0 |
| Hydrosaurus amboinensis | 41.8 | 58.2 | 4678 | 2067 | 3745 | 5639 | 24.4 |
| Chlamydosaurus kingii | 41.4 | 58.6 | 4863 | 2083 | 4046 | 5769 | 9.9 |
| Stats for total protein-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 43.1 | 56.9 | 3527 | 1330 | 2709 | 3715 | 12.0 |
| Calotes versicolor | 41.1 | 58.9 | 3230 | 1393 | 2969 | 3649 | 5.0 |
| Hydrosaurus amboinensis | 41.9 | 58.1 | 3433 | 1296 | 2612 | 3944 | 24.4 |
| Chlamydosaurus kingii | 41.2 | 58.8 | 3410 | 1238 | 2725 | 3916 | 9.9 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 42.5 | 57.5 | 374 | 254 | 369 | 480 | 12.0 |
| Calotes versicolor | 41.9 | 58.1 | 364 | 252 | 360 | 493 | 5.0 |
| Hydrosaurus amboinensis | 41.2 | 58.8 | 387 | 237 | 376 | 516 | 24.4 |
| Chlamydosaurus kingii | 41.8 | 58.2 | 375 | 245 | 365 | 499 | 9.9 |
| Stats for total rRNA-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 45.5 | 54.5 | 667 | 433 | 457 | 859 | 12.0 |
| Calotes versicolor | 43.5 | 56.5 | 613 | 423 | 468 | 876 | 5.0 |
| Hydrosaurus amboinensis | 44.2 | 55.8 | 631 | 447 | 492 | 870 | 24.4 |
| Chlamydosaurus kingii | 43.7 | 56.3 | 637 | 416 | 459 | 895 | 9.9 |
| Stats for ATP6 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 43.8 | 56.2 | 239 | 60 | 165 | 219 | 12.0 |
| Calotes versicolor | 41.1 | 58.9 | 208 | 72 | 179 | 223 | 5.0 |
| Hydrosaurus amboinensis | 40.2 | 59.8 | 218 | 56 | 160 | 248 | 24.4 |
| Chlamydosaurus kingii | 37.3 | 62.7 | 211 | 44 | 181 | 248 | 9.9 |
| Stats for ATP8 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 44.2 | 55.8 | 58 | 11 | 26 | 61 | 12.0 |
| Calotes versicolor | 39.5 | 60.5 | 48 | 16 | 40 | 58 | 5.0 |
| Hydrosaurus amboinensis | 36.5 | 63.5 | 45 | 13 | 33 | 68 | 24.4 |
| Chlamydosaurus kingii | 35.9 | 64.1 | 48 | 8 | 37 | 63 | 9.9 |
| Stats for COX1 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 45.5 | 54.5 | 484 | 220 | 382 | 462 | 12.0 |
| Calotes versicolor | 42.2 | 57.8 | 398 | 253 | 454 | 437 | 5.0 |
| Hydrosaurus amboinensis | 44.9 | 55.1 | 461 | 235 | 383 | 472 | 24.4 |
| Chlamydosaurus kingii | 43.2 | 56.8 | 453 | 216 | 384 | 495 | 9.9 |
| Stats for COX2 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 42.7 | 57.3 | 208 | 86 | 153 | 241 | 12.0 |
| Calotes versicolor | 42.1 | 57.9 | 194 | 93 | 173 | 221 | 5.0 |
| Hydrosaurus amboinensis | 42.5 | 57.5 | 204 | 89 | 153 | 244 | 24.4 |
| Chlamydosaurus kingii | 40.0 | 60.0 | 197 | 79 | 162 | 252 | 9.9 |
| Stats for COX3 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 42.5 | 57.5 | 220 | 113 | 209 | 242 | 12.0 |
| Calotes versicolor | 43.6 | 56.4 | 227 | 115 | 221 | 221 | 5.0 |
| Hydrosaurus amboinensis | 44.6 | 55.4 | 242 | 108 | 194 | 240 | 24.4 |
| Chlamydosaurus kingii | 43.5 | 56.5 | 236 | 105 | 191 | 252 | 9.9 |
| Stats for CYTB (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 43.6 | 56.4 | 350 | 143 | 295 | 343 | 12.0 |
| Calotes versicolor | 41.7 | 58.3 | 334 | 135 | 310 | 346 | 5.0 |
| Hydrosaurus amboinensis | 41.5 | 58.5 | 324 | 139 | 285 | 368 | 24.4 |
| Chlamydosaurus kingii | 40.9 | 59.1 | 320 | 133 | 295 | 359 | 9.9 |
| Stats for ND1 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 43.4 | 56.6 | 295 | 127 | 230 | 320 | 12.0 |
| Calotes versicolor | 39.9 | 60.1 | 260 | 125 | 262 | 319 | 5.0 |
| Hydrosaurus amboinensis | 42.3 | 57.7 | 293 | 119 | 229 | 334 | 24.4 |
| Chlamydosaurus kingii | 41.4 | 58.6 | 294 | 120 | 246 | 339 | 9.9 |
| Stats for ND2 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 43.1 | 56.9 | 339 | 106 | 236 | 352 | 12.0 |
| Calotes versicolor | 40.8 | 59.2 | 305 | 112 | 248 | 358 | 5.0 |
| Hydrosaurus amboinensis | 41.6 | 58.4 | 331 | 99 | 233 | 370 | 24.4 |
| Chlamydosaurus kingii | 41.7 | 58.3 | 337 | 94 | 227 | 375 | 9.9 |
| Stats for ND3 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 42.9 | 57.1 | 113 | 34 | 86 | 110 | 12.0 |
| Calotes versicolor | 44.1 | 55.9 | 103 | 51 | 99 | 96 | 5.0 |
| Hydrosaurus amboinensis | 44.0 | 56.0 | 112 | 39 | 83 | 109 | 24.4 |
| Chlamydosaurus kingii | 42.9 | 57.1 | 111 | 36 | 85 | 111 | 9.9 |
| Stats for ND4 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 41.2 | 58.8 | 413 | 151 | 339 | 466 | 12.0 |
| Calotes versicolor | 40.0 | 60.0 | 391 | 155 | 380 | 439 | 5.0 |
| Hydrosaurus amboinensis | 41.3 | 58.7 | 421 | 143 | 322 | 480 | 24.4 |
| Chlamydosaurus kingii | 40.2 | 59.8 | 408 | 143 | 337 | 483 | 9.9 |
| Stats for ND4L (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 37.5 | 62.5 | 81 | 28 | 74 | 108 | 12.0 |
| Calotes versicolor | 35.7 | 64.3 | 78 | 26 | 85 | 102 | 5.0 |
| Hydrosaurus amboinensis | 45.7 | 54.3 | 98 | 35 | 65 | 93 | 24.4 |
| Chlamydosaurus kingii | 36.4 | 63.6 | 80 | 26 | 71 | 114 | 9.9 |
| Stats for ND5 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 42.9 | 57.1 | 564 | 205 | 454 | 571 | 12.0 |
| Calotes versicolor | 40.0 | 60.0 | 531 | 183 | 455 | 616 | 5.0 |
| Hydrosaurus amboinensis | 40.0 | 60.0 | 544 | 173 | 400 | 674 | 24.4 |
| Chlamydosaurus kingii | 40.7 | 59.3 | 554 | 177 | 453 | 613 | 9.9 |
| Stats for ND6 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 41.9 | 58.1 | 163 | 48 | 65 | 228 | 12.0 |
| Calotes versicolor | 42.4 | 57.6 | 156 | 59 | 69 | 223 | 5.0 |
| Hydrosaurus amboinensis | 37.0 | 63.0 | 141 | 52 | 78 | 251 | 24.4 |
| Chlamydosaurus kingii | 43.9 | 56.1 | 161 | 59 | 61 | 220 | 9.9 |
| Stats for 12S rRNA gene (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 51.3 | 48.7 | 283 | 184 | 152 | 291 | 12.0 |
| Calotes versicolor | 43.1 | 56.9 | 203 | 156 | 172 | 301 | 5.0 |
| Hydrosaurus amboinensis | 45.3 | 54.7 | 227 | 178 | 180 | 309 | 24.4 |
| Chlamydosaurus kingii | 48.8 | 51.2 | 266 | 178 | 156 | 310 | 9.9 |
| Stats for 16S rRNA gene (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Pogona vitticeps | 42.0 | 58.0 | 384 | 249 | 305 | 568 | 12.0 |
| Calotes versicolor | 43.7 | 56.3 | 410 | 267 | 296 | 575 | 5.0 |
| Hydrosaurus amboinensis | 43.5 | 56.5 | 404 | 269 | 312 | 561 | 24.4 |
| Chlamydosaurus kingii | 40.7 | 59.3 | 371 | 238 | 303 | 585 | 9.9 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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