Stats for family Rallidae

Species in family:
Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 44.8 55.2 5361 2270 3948 5450 20.6
Gallinula chloropus 44.6 55.4 5329 2273 3960 5465 18.6
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 45.4 54.6 3455 1179 2325 3245 20.6
Gallinula chloropus 45.3 54.7 3819 1314 2616 3594 18.6
Stats for D-loop (group size: 1 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 41.6 58.4 409 219 420 462 20.6
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 41.9 58.1 389 259 385 512 20.6
Gallinula chloropus 41.6 58.4 387 256 389 513 18.6
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 45.6 54.4 687 475 525 863 20.6
Gallinula chloropus 45.0 55.0 682 465 530 872 18.6
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 46.6 53.4 258 61 158 207 20.6
Gallinula chloropus 44.9 55.1 246 61 170 207 18.6
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 42.9 57.1 64 8 32 64 20.6
Gallinula chloropus 37.5 62.5 54 9 44 61 18.6
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 47.2 52.8 490 242 381 438 20.6
Gallinula chloropus 47.8 52.2 494 246 369 439 18.6
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 44.2 55.8 210 92 169 213 20.6
Gallinula chloropus 44.0 56.0 211 90 164 219 18.6
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 46.9 53.1 255 113 196 220 20.6
Gallinula chloropus 45.4 54.6 244 112 207 221 18.6
Stats for CYTB (group size: 1 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Gallinula chloropus 46.5 53.5 394 137 271 341 18.6
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 43.6 56.4 307 112 243 298 20.6
Gallinula chloropus 43.8 56.3 304 116 249 291 18.6
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 43.5 56.5 361 91 241 347 20.6
Gallinula chloropus 44.3 55.7 363 98 237 342 18.6
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 44.6 55.4 116 41 96 99 20.6
Gallinula chloropus 46.3 53.7 123 40 88 101 18.6
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 44.4 55.6 472 136 297 463 20.6
Gallinula chloropus 44.9 55.1 477 137 297 457 18.6
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 46.5 53.5 99 39 68 91 20.6
Gallinula chloropus 46.5 53.5 101 37 66 93 18.6
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 45.3 54.7 622 199 398 593 20.6
Gallinula chloropus 44.3 55.7 613 190 401 607 18.6
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 47.9 52.1 203 47 51 221 20.6
Gallinula chloropus 46.2 53.8 198 43 57 224 18.6
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 48.6 51.4 281 191 189 311 20.6
Gallinula chloropus 47.4 52.6 279 180 189 321 18.6
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Fulica atra 43.7 56.3 406 284 336 552 20.6
Gallinula chloropus 43.5 56.5 403 285 341 551 18.6

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.