Stats for family Caviidae
| Stats for total mtDNA (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
39.3 |
60.7 |
4155 |
2450 |
4805 |
5391 |
12.0 |
| Stats for total protein-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
39.0 |
61.0 |
2940 |
1491 |
3404 |
3514 |
12.0 |
| Stats for D-loop (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
45.1 |
54.9 |
358 |
254 |
334 |
411 |
12.0 |
| Stats for total tRNA-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
37.7 |
62.3 |
320 |
246 |
419 |
518 |
12.0 |
| Stats for total rRNA-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
38.3 |
61.7 |
510 |
450 |
632 |
916 |
12.0 |
| Stats for ATP6 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
40.2 |
59.8 |
199 |
75 |
199 |
208 |
12.0 |
| Stats for ATP8 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
32.4 |
67.6 |
52 |
14 |
62 |
76 |
12.0 |
| Stats for COX1 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
40.9 |
59.1 |
344 |
287 |
509 |
402 |
12.0 |
| Stats for COX2 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
37.7 |
62.3 |
163 |
95 |
201 |
225 |
12.0 |
| Stats for COX3 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
40.2 |
59.8 |
189 |
126 |
246 |
223 |
12.0 |
| Stats for CYTB (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
44.8 |
55.2 |
348 |
163 |
312 |
317 |
12.0 |
| Stats for ND1 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
40.8 |
59.2 |
272 |
120 |
278 |
290 |
12.0 |
| Stats for ND2 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
36.7 |
63.3 |
286 |
97 |
302 |
359 |
12.0 |
| Stats for ND3 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
37.2 |
62.8 |
84 |
45 |
112 |
106 |
12.0 |
| Stats for ND4 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
37.2 |
62.8 |
363 |
149 |
409 |
457 |
12.0 |
| Stats for ND4L (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
35.4 |
64.6 |
69 |
36 |
102 |
90 |
12.0 |
| Stats for ND5 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
37.3 |
62.7 |
456 |
220 |
559 |
577 |
12.0 |
| Stats for ND6 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
36.7 |
63.3 |
127 |
68 |
131 |
205 |
12.0 |
| Stats for 12S rRNA gene (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
41.1 |
58.9 |
206 |
182 |
224 |
331 |
12.0 |
| Stats for 16S rRNA gene (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Cavia porcellus |
36.5 |
63.5 |
304 |
268 |
408 |
585 |
12.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email: 
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.
