Stats for family Rajidae

Stats for total mtDNA (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 40.3 59.7 4368 2364 4901 5091 8.0
Amblyraja radiata 40.3 59.7 4351 2409 4933 5090 16.0
Raja rhina 41.4 58.6 4604 2404 4812 5090 26.0
Stats for total protein-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 41.2 58.8 3216 1485 3402 3308 8.0
Amblyraja radiata 41.1 58.9 3188 1498 3430 3298 16.0
Raja rhina 42.7 57.3 3383 1491 3275 3262 26.0
Stats for D-loop (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 34.9 65.1 229 141 343 347 8.0
Raja rhina 34.6 65.4 272 161 410 408 26.0
Stats for total tRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 38.4 61.6 340 254 437 516 8.0
Amblyraja radiata 38.5 61.5 338 257 439 511 16.0
Raja rhina 39.2 60.8 348 259 432 510 26.0
Stats for total rRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 39.4 60.6 573 470 701 902 8.0
Amblyraja radiata 39.5 60.5 566 479 698 902 16.0
Raja rhina 40.3 59.7 587 478 683 894 26.0
Stats for ATP6 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 39.8 60.2 194 78 215 197 8.0
Amblyraja radiata 39.0 61.0 189 78 218 199 16.0
Raja rhina 42.1 57.9 212 76 203 193 26.0
Stats for ATP8 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 35.1 64.9 46 13 54 55 8.0
Amblyraja radiata 37.5 62.5 50 13 50 55 16.0
Raja rhina 38.7 61.3 50 15 52 51 26.0
Stats for COX1 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 41.8 58.2 394 257 495 411 8.0
Amblyraja radiata 41.6 58.4 391 256 502 408 16.0
Raja rhina 43.2 56.8 408 265 486 398 26.0
Stats for COX2 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 37.6 62.4 160 100 199 232 8.0
Amblyraja radiata 38.4 61.6 159 106 200 226 16.0
Raja rhina 39.5 60.5 164 109 196 222 26.0
Stats for COX3 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 44.0 56.0 216 130 238 202 8.0
Amblyraja radiata 44.3 55.7 218 130 237 201 16.0
Raja rhina 45.9 54.1 232 129 221 204 26.0
Stats for CYTB (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 40.5 59.5 320 143 369 311 8.0
Amblyraja radiata 42.9 57.1 336 154 353 300 16.0
Raja rhina 44.3 55.7 354 152 341 296 26.0
Stats for ND1 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 41.3 58.7 281 122 302 270 8.0
Amblyraja radiata 41.7 58.3 283 124 293 275 16.0
Raja rhina 44.8 55.2 313 124 268 270 26.0
Stats for ND2 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 43.7 56.3 344 113 281 308 8.0
Amblyraja radiata 42.2 57.8 332 110 289 316 16.0
Raja rhina 42.4 57.6 340 104 291 311 26.0
Stats for ND3 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 44.4 55.6 104 51 115 79 8.0
Amblyraja radiata 45.6 54.4 105 55 111 80 16.0
Raja rhina 45.0 55.0 107 50 110 82 26.0
Stats for ND4 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 42.1 57.9 407 175 399 400 8.0
Amblyraja radiata 40.8 59.2 391 172 424 394 16.0
Raja rhina 42.1 57.9 417 164 402 398 26.0
Stats for ND4L (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 43.4 56.6 88 41 93 75 8.0
Amblyraja radiata 42.8 57.2 91 36 94 76 16.0
Raja rhina 44.8 55.2 98 35 91 73 26.0
Stats for ND5 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 39.8 60.2 517 214 551 554 8.0
Amblyraja radiata 39.1 60.9 502 215 566 553 16.0
Raja rhina 41.4 58.6 541 220 527 548 26.0
Stats for ND6 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 38.0 62.0 147 50 99 223 8.0
Amblyraja radiata 37.4 62.6 142 52 102 223 16.0
Raja rhina 38.3 61.7 149 50 95 225 26.0
Stats for 12S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 41.5 58.5 220 181 253 313 8.0
Amblyraja radiata 41.5 58.5 217 184 252 314 16.0
Raja rhina 42.7 57.3 227 186 247 307 26.0
Stats for 16S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Leucoraja erinacea 38.2 61.8 353 289 448 589 8.0
Amblyraja radiata 38.4 61.6 349 295 446 588 16.0
Raja rhina 38.9 61.1 360 292 436 587 26.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.