Stats for family Paridae

Stats for total mtDNA (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 48.4 51.6 5684 2437 3762 4900 9.5
Poecile palustris 48.3 51.7 5654 2478 3786 4905 11.9
Parus major 47.7 52.3 5631 2370 3796 4979 15.4
Stats for total protein-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 49.9 50.1 4197 1480 2494 3207 9.5
Poecile palustris 49.8 50.2 4160 1510 2518 3187 11.9
Parus major 49.0 51.0 4161 1416 2504 3296 15.4
Stats for D-loop (group size: 1 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 43.8 56.2 355 169 361 310 9.5
Stats for total tRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 42.9 57.1 398 265 374 510 9.5
Poecile palustris 42.9 57.1 399 265 374 509 11.9
Parus major 42.2 57.8 390 262 379 513 15.4
Stats for total rRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 47.0 53.0 690 523 521 845 9.5
Poecile palustris 46.9 53.1 689 526 529 844 11.9
Parus major 46.8 53.2 683 526 528 844 15.4
Stats for ATP6 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 51.3 48.7 271 80 144 189 9.5
Poecile palustris 48.1 51.9 259 70 161 194 11.9
Parus major 49.4 50.6 272 66 153 193 15.4
Stats for ATP8 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 45.2 54.8 67 9 41 51 9.5
Poecile palustris 44.0 56.0 63 11 46 48 11.9
Parus major 45.8 54.2 66 11 36 55 15.4
Stats for COX1 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 50.5 49.5 524 260 349 418 9.5
Poecile palustris 50.5 49.5 517 271 365 407 11.9
Parus major 50.2 49.8 518 261 356 416 15.4
Stats for COX2 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 49.7 50.3 238 102 148 196 9.5
Poecile palustris 49.9 50.1 236 104 143 198 11.9
Parus major 50.6 49.4 244 102 138 200 15.4
Stats for COX3 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 50.8 49.2 274 124 188 198 9.5
Poecile palustris 50.6 49.4 274 123 184 203 11.9
Parus major 51.0 49.0 280 120 182 202 15.4
Stats for CYTB (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 48.6 51.4 410 145 274 314 9.5
Poecile palustris 49.9 50.1 428 142 264 309 11.9
Parus major 49.7 50.3 427 141 263 311 15.4
Stats for ND1 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 50.1 49.9 355 135 228 260 9.5
Poecile palustris 49.7 50.3 345 141 235 257 11.9
Parus major 49.8 50.2 353 134 234 257 15.4
Stats for ND2 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 49.6 50.4 403 113 220 304 9.5
Poecile palustris 50.9 49.1 410 119 209 302 11.9
Parus major 47.9 52.1 394 104 218 324 15.4
Stats for ND3 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 49.9 50.1 123 52 85 91 9.5
Poecile palustris 50.7 49.3 127 48 81 89 11.9
Parus major 46.7 53.3 119 45 88 99 15.4
Stats for ND4 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 50.4 49.6 543 151 296 388 9.5
Poecile palustris 50.1 49.9 534 157 309 378 11.9
Parus major 48.4 51.6 528 139 306 405 15.4
Stats for ND4L (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 51.9 48.1 110 44 69 74 9.5
Poecile palustris 50.5 49.5 106 44 72 75 11.9
Parus major 47.1 52.9 104 36 73 84 15.4
Stats for ND5 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 48.8 51.2 673 215 402 528 9.5
Poecile palustris 49.2 50.8 668 227 394 529 11.9
Parus major 48.0 52.0 661 211 397 549 15.4
Stats for ND6 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 50.3 49.7 209 52 54 204 9.5
Poecile palustris 48.4 51.6 195 55 60 206 11.9
Parus major 47.4 52.6 198 48 64 209 15.4
Stats for 12S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 49.7 50.3 280 207 197 295 9.5
Poecile palustris 49.9 50.1 282 211 200 294 11.9
Parus major 49.8 50.2 280 208 197 295 15.4
Stats for 16S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Periparus ater 45.4 54.6 410 316 324 550 9.5
Poecile palustris 45.1 54.9 407 315 329 550 11.9
Parus major 45.0 55.0 403 318 331 549 15.4

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.