Stats for family Chelydridae

Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 37.9 62.1 4183 2098 4541 5747 70.3
Chelydra serpentina 37.7 62.3 4174 2097 4634 5726 47.0
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 38.3 61.7 3037 1307 3127 3861 70.3
Chelydra serpentina 38.0 62.0 3020 1297 3196 3845 47.0
Stats for D-loop (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 31.0 69.0 205 125 375 358 70.3
Chelydra serpentina 30.6 69.4 209 135 417 364 47.0
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 38.0 62.0 348 239 418 539 70.3
Chelydra serpentina 38.2 61.8 351 239 416 540 47.0
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 38.6 61.4 570 421 606 973 70.3
Chelydra serpentina 39.2 60.8 585 423 593 970 47.0
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 36.8 63.2 189 67 195 245 70.3
Chelydra serpentina 37.1 62.9 193 61 190 240 47.0
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 34.5 65.5 47 10 43 65 70.3
Chelydra serpentina 33.9 66.1 49 7 43 66 47.0
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 39.7 60.3 358 256 473 461 70.3
Chelydra serpentina 39.0 61.0 352 252 479 465 47.0
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 36.1 63.9 158 90 194 245 70.3
Chelydra serpentina 34.5 65.5 149 87 202 246 47.0
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 41.2 58.8 199 113 216 229 70.3
Chelydra serpentina 42.0 58.0 213 117 220 235 47.0
Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 41.7 58.3 346 131 301 366 70.3
Chelydra serpentina 41.1 58.9 338 132 319 355 47.0
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 37.6 62.4 260 105 287 319 70.3
Chelydra serpentina 37.9 62.1 257 111 297 305 47.0
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 37.6 62.4 297 94 269 379 70.3
Chelydra serpentina 36.0 64.0 286 88 277 388 47.0
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 36.6 63.4 89 39 107 115 70.3
Chelydra serpentina 38.6 61.4 94 41 106 109 47.0
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 37.2 62.8 368 146 382 485 70.3
Chelydra serpentina 35.8 64.2 357 138 395 494 47.0
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 38.4 61.6 80 34 101 82 70.3
Chelydra serpentina 39.1 60.9 87 29 96 85 47.0
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 37.6 62.4 492 185 495 628 70.3
Chelydra serpentina 38.2 61.8 498 191 493 624 47.0
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 38.8 61.2 163 43 71 254 70.3
Chelydra serpentina 37.5 62.5 152 45 84 244 47.0
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 41.0 59.0 229 167 223 347 70.3
Chelydra serpentina 42.3 57.7 244 164 210 347 47.0
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Macrochelys temminckii 37.1 62.9 341 254 383 626 70.3
Chelydra serpentina 37.4 62.6 341 259 383 623 47.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.