Stats for order Cypriniformes

Browsing families:
Balitoridae (1)
Catostomidae (8)
Cyprinidae (19)
Species in group (28):
Abramis brama
Barbatula barbatula
Carassius auratus
Carpiodes carpio
Catostomus commersonii
Ctenopharyngodon idella
Cycleptus elongatus
Cyprinella lutrensis
Cyprinella spiloptera
Cyprinus carpio
...
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Stats for total mtDNA (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.9 - 46.5% 53.5 - 60.1% 3969 - 4644 2555 - 3213 4042 - 5093 4427 - 5406 2.0 - 47.0
Median 43.8% 56.4% 4439 2915 4446 4881 10.0
Average ± stdev 43.9 ± 1.5% 56.1 ± 1.5% 4423 ± 142 2899 ± 172 4432 ± 201 4910 ± 243 12.8 ± 11.7
Coefficient of variation 0.03 0.03 0.03 0.06 0.05 0.05 0.91
Pearson correlation
coefficient with log10MLS		 -0.17 0.17 0.14 -0.37 -0.37 0.46 -
Pearson p-value
(two tailed)		 3.96E-01 3.95E-01 4.69E-01 4.93E-02 5.52E-02 1.32E-02 -
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Stats for total protein-coding genes (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.3 - 46.9% 53.1 - 60.7% 2800 - 3374 1578 - 2090 2821 - 3387 2835 - 3633 2.0 - 47.0
Median 44.1% 56.0% 3185 1849 3188 3208 10.0
Average ± stdev 44.0 ± 1.8% 56.0 ± 1.8% 3179 ± 125 1841 ± 132 3164 ± 143 3217 ± 203 12.8 ± 11.7
Coefficient of variation 0.04 0.03 0.04 0.07 0.05 0.06 0.91
Pearson correlation
coefficient with log10MLS		 -0.13 0.13 0.19 -0.38 -0.48 0.46 -
Pearson p-value
(two tailed)		 5.18E-01 5.18E-01 3.32E-01 4.72E-02 9.01E-03 1.28E-02 -
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Stats for D-loop (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 32.1 - 38.0% 62.0 - 67.9% 176 - 207 115 - 152 277 - 325 297 - 323 3.0 - 41.0
Median 36.4% 66.0% 194 138 300 305 20.0
Average ± stdev 35.2 ± 2.1% 64.8 ± 2.1% 194 ± 8 134 ± 12 298 ± 14 307 ± 10 18.3 ± 14.2
Coefficient of variation 0.06 0.03 0.05 0.09 0.05 0.03 0.78
Pearson correlation
coefficient with log10MLS		 0.10 -0.10 0.11 -0.12 -0.31 -0.19 -
Pearson p-value
(two tailed)		 8.22E-01 8.22E-01 7.99E-01 7.69E-01 4.58E-01 6.44E-01 -
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Stats for total tRNA-coding genes (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.8 - 46.5% 53.5 - 57.2% 357 - 457 304 - 372 385 - 496 450 - 536 2.0 - 47.0
Median 44.7% 55.3% 380 320 395 467 10.0
Average ± stdev 44.8 ± 0.8% 55.2 ± 0.8% 382 ± 16 321 ± 13 397 ± 19 469 ± 16 12.8 ± 11.7
Coefficient of variation 0.02 0.01 0.04 0.04 0.05 0.03 0.91
Pearson correlation
coefficient with log10MLS		 -0.20 0.21 -0.01 -0.23 0.01 0.10 -
Pearson p-value
(two tailed)		 2.99E-01 2.87E-01 9.51E-01 2.47E-01 9.51E-01 6.24E-01 -
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Stats for total rRNA-coding genes (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.7 - 48.0% 52.0 - 57.3% 596 - 661 530 - 607 515 - 564 840 - 958 2.0 - 47.0
Median 46.3% 53.8% 643 585 542 876 10.0
Average ± stdev 46.2 ± 1.0% 53.8 ± 1.0% 640 ± 14 578 ± 20 539 ± 14 881 ± 27 12.8 ± 11.7
Coefficient of variation 0.02 0.02 0.02 0.04 0.03 0.03 0.91
Pearson correlation
coefficient with log10MLS		 -0.19 0.19 0.12 -0.33 -0.39 0.40 -
Pearson p-value
(two tailed)		 3.23E-01 3.23E-01 5.45E-01 9.02E-02 4.29E-02 3.60E-02 -
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Stats for ATP6 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 36.8 - 44.2% 55.8 - 63.2% 162 - 203 83 - 111 184 - 227 172 - 215 2.0 - 47.0
Median 41.5% 59.2% 187 99 208 194 10.0
Average ± stdev 41.3 ± 1.9% 58.7 ± 1.9% 184 ± 9 97 ± 7 207 ± 9 194 ± 10 12.8 ± 11.7
Coefficient of variation 0.05 0.03 0.05 0.07 0.05 0.06 0.91
Pearson correlation
coefficient with log10MLS		 -0.09 0.09 -0.14 0.03 -0.31 0.38 -
Pearson p-value
(two tailed)		 6.66E-01 6.66E-01 4.80E-01 8.60E-01 1.12E-01 4.38E-02 -
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Stats for ATP8 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 33.3 - 43.5% 56.5 - 66.7% 39 - 52 15 - 26 36 - 51 51 - 63 2.0 - 47.0
Median 40.6% 59.9% 46 20 43 58 10.0
Average ± stdev 39.8 ± 2.5% 60.2 ± 2.5% 45 ± 3 20 ± 2 42 ± 3 57 ± 2 12.8 ± 11.7
Coefficient of variation 0.06 0.04 0.07 0.13 0.09 0.05 0.91
Pearson correlation
coefficient with log10MLS		 -0.05 0.05 -0.25 0.29 0.02 0.11 -
Pearson p-value
(two tailed)		 8.15E-01 8.15E-01 1.96E-01 1.28E-01 9.15E-01 5.87E-01 -
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Stats for COX1 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.8 - 46.6% 53.4 - 60.2% 347 - 427 264 - 306 440 - 497 376 - 436 2.0 - 47.0
Median 43.7% 56.3% 395 285 472 402 10.0
Average ± stdev 43.8 ± 1.5% 56.2 ± 1.5% 395 ± 17 283 ± 11 468 ± 16 403 ± 17 12.8 ± 11.7
Coefficient of variation 0.04 0.03 0.04 0.04 0.03 0.04 0.91
Pearson correlation
coefficient with log10MLS		 0.05 -0.05 0.24 -0.27 -0.42 0.33 -
Pearson p-value
(two tailed)		 8.19E-01 8.19E-01 2.21E-01 1.65E-01 2.72E-02 8.21E-02 -
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Stats for COX2 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.9 - 44.9% 55.1 - 60.1% 164 - 195 107 - 127 169 - 205 192 - 221 2.0 - 47.0
Median 42.3% 58.2% 174 116 194 205 10.0
Average ± stdev 42.4 ± 1.4% 57.6 ± 1.4% 175 ± 7 116 ± 5 193 ± 7 205 ± 6 12.8 ± 11.7
Coefficient of variation 0.03 0.02 0.04 0.05 0.04 0.03 0.91
Pearson correlation
coefficient with log10MLS		 0.16 -0.16 0.24 -0.04 -0.34 0.17 -
Pearson p-value
(two tailed)		 4.25E-01 4.25E-01 2.18E-01 8.23E-01 7.67E-02 3.80E-01 -
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Stats for COX3 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.4 - 47.7% 52.3 - 57.6% 194 - 232 124 - 160 200 - 240 185 - 229 2.0 - 47.0
Median 45.5% 54.5% 218 139 225 204 10.0
Average ± stdev 45.4 ± 1.4% 54.6 ± 1.4% 216 ± 8 139 ± 8 222 ± 8 206 ± 11 12.8 ± 11.7
Coefficient of variation 0.03 0.03 0.04 0.06 0.04 0.06 0.91
Pearson correlation
coefficient with log10MLS		 -0.12 0.12 0.30 -0.40 -0.39 0.43 -
Pearson p-value
(two tailed)		 5.52E-01 5.52E-01 1.23E-01 3.75E-02 3.85E-02 2.34E-02 -
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Stats for CYTB (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.1 - 48.2% 51.8 - 60.9% 277 - 342 151 - 215 299 - 365 266 - 350 2.0 - 47.0
Median 44.6% 55.9% 324 187 332 306 10.0
Average ± stdev 44.2 ± 2.1% 55.8 ± 2.1% 320 ± 14 183 ± 14 329 ± 16 306 ± 20 12.8 ± 11.7
Coefficient of variation 0.05 0.04 0.05 0.08 0.05 0.07 0.91
Pearson correlation
coefficient with log10MLS		 -0.17 0.17 0.16 -0.43 -0.39 0.49 -
Pearson p-value
(two tailed)		 3.89E-01 3.89E-01 4.18E-01 2.39E-02 4.26E-02 8.62E-03 -
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Stats for ND1 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.0 - 50.3% 49.7 - 60.0% 242 - 304 137 - 201 236 - 302 204 - 304 2.0 - 47.0
Median 45.2% 54.9% 281 167 279 263 10.0
Average ± stdev 45.6 ± 2.7% 54.4 ± 2.7% 276 ± 16 168 ± 16 273 ± 17 257 ± 28 12.8 ± 11.7
Coefficient of variation 0.06 0.05 0.06 0.10 0.06 0.11 0.91
Pearson correlation
coefficient with log10MLS		 -0.19 0.19 0.12 -0.41 -0.51 0.49 -
Pearson p-value
(two tailed)		 3.29E-01 3.29E-01 5.40E-01 2.88E-02 5.70E-03 8.17E-03 -
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Stats for ND2 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.4 - 50.8% 49.2 - 59.6% 277 - 352 120 - 198 210 - 297 239 - 366 2.0 - 47.0
Median 46.8% 53.4% 330 161 270 296 10.0
Average ± stdev 46.7 ± 2.5% 53.3 ± 2.5% 326 ± 15 161 ± 18 262 ± 21 295 ± 32 12.8 ± 11.7
Coefficient of variation 0.05 0.05 0.05 0.12 0.08 0.11 0.91
Pearson correlation
coefficient with log10MLS		 -0.21 0.21 0.17 -0.42 -0.48 0.48 -
Pearson p-value
(two tailed)		 2.88E-01 2.88E-01 3.98E-01 2.46E-02 9.51E-03 8.92E-03 -
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Stats for ND3 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.2 - 48.7% 51.3 - 61.8% 78 - 106 49 - 67 93 - 116 80 - 104 2.0 - 47.0
Median 44.1% 55.9% 96 57 107 89 10.0
Average ± stdev 43.7 ± 2.5% 56.3 ± 2.5% 95 ± 6 56 ± 5 106 ± 6 91 ± 6 12.8 ± 11.7
Coefficient of variation 0.06 0.04 0.07 0.09 0.06 0.08 0.91
Pearson correlation
coefficient with log10MLS		 0.03 -0.03 0.28 -0.30 -0.29 0.22 -
Pearson p-value
(two tailed)		 8.66E-01 8.66E-01 1.43E-01 1.25E-01 1.28E-01 2.67E-01 -
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Stats for ND4 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 46.8% 53.2 - 61.6% 333 - 416 186 - 248 345 - 420 330 - 445 2.0 - 47.0
Median 43.4% 56.6% 387 217 390 398 10.0
Average ± stdev 43.5 ± 2.1% 56.5 ± 2.1% 383 ± 18 217 ± 17 387 ± 21 393 ± 29 12.8 ± 11.7
Coefficient of variation 0.05 0.04 0.05 0.08 0.06 0.08 0.91
Pearson correlation
coefficient with log10MLS		 -0.16 0.16 0.10 -0.36 -0.45 0.47 -
Pearson p-value
(two tailed)		 4.27E-01 4.27E-01 6.03E-01 5.94E-02 1.71E-02 1.12E-02 -
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Stats for ND4L (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.4 - 49.2% 50.8 - 59.6% 79 - 94 41 - 55 79 - 92 68 - 89 2.0 - 47.0
Median 46.5% 53.5% 89 50 84 75 10.0
Average ± stdev 46.4 ± 2.0% 53.6 ± 2.0% 87 ± 3 49 ± 3 84 ± 3 74 ± 4 12.8 ± 11.7
Coefficient of variation 0.04 0.04 0.04 0.07 0.04 0.06 0.91
Pearson correlation
coefficient with log10MLS		 0.08 -0.08 0.07 0.06 -0.38 0.19 -
Pearson p-value
(two tailed)		 6.94E-01 6.94E-01 7.08E-01 7.76E-01 4.91E-02 3.31E-01 -
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Stats for ND5 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.2 - 46.2% 53.8 - 62.8% 438 - 548 218 - 325 436 - 561 481 - 627 2.0 - 47.0
Median 42.4% 57.6% 514 275 513 540 10.0
Average ± stdev 42.6 ± 2.1% 57.4 ± 2.1% 509 ± 25 271 ± 26 511 ± 27 542 ± 36 12.8 ± 11.7
Coefficient of variation 0.05 0.04 0.05 0.10 0.05 0.07 0.91
Pearson correlation
coefficient with log10MLS		 -0.19 0.19 0.23 -0.51 -0.39 0.47 -
Pearson p-value
(two tailed)		 3.45E-01 3.45E-01 2.30E-01 5.65E-03 4.18E-02 1.23E-02 -
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Stats for ND6 (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.3 - 51.7% 48.3 - 59.7% 145 - 173 59 - 98 63 - 100 161 - 226 2.0 - 47.0
Median 46.6% 53.6% 165 80 80 202 10.0
Average ± stdev 46.1 ± 2.5% 53.9 ± 2.5% 163 ± 6 76 ± 10 80 ± 9 200 ± 15 12.8 ± 11.7
Coefficient of variation 0.06 0.05 0.04 0.13 0.12 0.08 0.91
Pearson correlation
coefficient with log10MLS		 -0.07 0.07 0.15 -0.20 -0.51 0.38 -
Pearson p-value
(two tailed)		 7.09E-01 7.09E-01 4.61E-01 3.17E-01 5.14E-03 4.38E-02 -
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Stats for 12S rRNA gene (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.6 - 51.2% 48.8 - 54.4% 232 - 266 202 - 234 180 - 201 282 - 324 2.0 - 47.0
Median 49.4% 50.6% 251 221 189 293 10.0
Average ± stdev 49.3 ± 1.1% 50.7 ± 1.1% 250 ± 6 219 ± 7 189 ± 5 294 ± 8 12.8 ± 11.7
Coefficient of variation 0.02 0.02 0.03 0.04 0.03 0.03 0.91
Pearson correlation
coefficient with log10MLS		 -0.07 0.07 0.06 -0.21 -0.22 0.17 -
Pearson p-value
(two tailed)		 7.08E-01 7.08E-01 7.70E-01 2.87E-01 2.56E-01 3.80E-01 -
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Stats for 16S rRNA gene (group size: 28 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.1 - 46.7% 53.3 - 58.9% 364 - 412 328 - 382 327 - 369 545 - 634 2.0 - 47.0
Median 44.6% 55.5% 387 363 353 585 10.0
Average ± stdev 44.4 ± 1.2% 55.6 ± 1.2% 389 ± 10 358 ± 14 350 ± 12 586 ± 21 12.8 ± 11.7
Coefficient of variation 0.03 0.02 0.03 0.04 0.03 0.04 0.91
Pearson correlation
coefficient with log10MLS		 -0.22 0.22 0.12 -0.36 -0.37 0.46 -
Pearson p-value
(two tailed)		 2.69E-01 2.69E-01 5.33E-01 5.96E-02 5.29E-02 1.39E-02 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.