Stats for order Perissodactyla
Browsing families:
| Stats for total mtDNA (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.2 - 42.1% | 57.9 - 59.8% | 4586 - 4819 | 2088 - 2236 | 4173 - 4405 | 5286 - 5663 | 30.1 - 57.0 |
| Median | 41.7% | 58.3% | 4687 | 2183 | 4259 | 5394 | 43.5 |
| Average ± stdev | 41.4 ± 0.6% | 58.6 ± 0.7% | 4698 ± 68 | 2166 ± 39 | 4272 ± 60 | 5430 ± 120 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.02 | 0.01 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.28 | 0.29 | 0.07 | 0.13 | 0.56 | 0.41 | - |
| Pearson p-value (two tailed) |
4.35E-01 | 4.19E-01 | 8.52E-01 | 7.18E-01 | 9.56E-02 | 2.41E-01 | - |
| Stats for total protein-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.9 - 42.7% | 57.3 - 59.1% | 3342 - 3495 | 1299 - 1383 | 2895 - 3005 | 3521 - 3693 | 30.1 - 57.0 |
| Median | 42.6% | 57.5% | 3459 | 1348 | 2967 | 3566 | 43.5 |
| Average ± stdev | 42.2 ± 0.7% | 57.8 ± 0.7% | 3437 ± 49 | 1347 ± 28 | 2957 ± 28 | 3592 ± 60 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.02 | 0.01 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.49 | 0.49 | -0.60 | -0.17 | 0.54 | 0.35 | - |
| Pearson p-value (two tailed) |
1.48E-01 | 1.48E-01 | 6.72E-02 | 6.41E-01 | 1.05E-01 | 3.16E-01 | - |
| Stats for D-loop (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Stats for total tRNA-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.9 - 38.3% | 61.7 - 63.1% | 323 - 342 | 224 - 239 | 402 - 421 | 522 - 537 | 30.1 - 57.0 |
| Median | 37.6% | 62.4% | 333 | 236 | 415 | 527 | 43.5 |
| Average ± stdev | 37.6 ± 0.5% | 62.4 ± 0.5% | 334 ± 5 | 232 ± 5 | 415 ± 5 | 527 ± 5 | 40.0 ± 9.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.01 | 0.22 |
| Pearson correlation coefficient with log10MLS |
0.21 | -0.21 | 0.56 | -0.32 | -0.70 | 0.48 | - |
| Pearson p-value (two tailed) |
5.59E-01 | 5.59E-01 | 9.54E-02 | 3.75E-01 | 2.35E-02 | 1.65E-01 | - |
| Stats for total rRNA-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.1 - 40.1% | 59.9 - 61.9% | 566 - 593 | 406 - 434 | 572 - 609 | 934 - 971 | 30.1 - 57.0 |
| Median | 39.7% | 60.4% | 585 | 432 | 604 | 939 | 43.5 |
| Average ± stdev | 39.5 ± 0.5% | 60.5 ± 0.5% | 581 ± 7 | 427 ± 8 | 596 ± 11 | 945 ± 11 | 40.0 ± 9.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.40 | 0.40 | -0.25 | -0.38 | 0.21 | 0.28 | - |
| Pearson p-value (two tailed) |
2.48E-01 | 2.48E-01 | 4.78E-01 | 2.74E-01 | 5.65E-01 | 4.26E-01 | - |
| Stats for ATP6 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.2 - 43.3% | 56.7 - 59.8% | 202 - 214 | 66 - 81 | 176 - 198 | 201 - 222 | 30.1 - 57.0 |
| Median | 41.1% | 59.0% | 206 | 75 | 188 | 214 | 43.5 |
| Average ± stdev | 41.4 ± 0.9% | 58.6 ± 0.9% | 206 ± 3 | 74 ± 4 | 187 ± 5 | 211 ± 6 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.06 | 0.03 | 0.03 | 0.22 |
| Pearson correlation coefficient with log10MLS |
0.46 | -0.46 | 0.75 | -0.05 | -0.36 | -0.12 | - |
| Pearson p-value (two tailed) |
1.83E-01 | 1.83E-01 | 1.25E-02 | 8.91E-01 | 3.13E-01 | 7.51E-01 | - |
| Stats for ATP8 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 33.3 - 35.8% | 64.2 - 66.7% | 51 - 60 | 12 - 20 | 51 - 57 | 78 - 85 | 30.1 - 57.0 |
| Median | 34.8% | 65.2% | 54 | 16 | 54 | 80 | 43.5 |
| Average ± stdev | 34.6 ± 0.9% | 65.4 ± 0.9% | 55 ± 2 | 15 ± 2 | 53 ± 1 | 80 ± 2 | 40.0 ± 9.0 |
| Coefficient of variation | 0.03 | 0.01 | 0.05 | 0.16 | 0.03 | 0.03 | 0.22 |
| Pearson correlation coefficient with log10MLS |
0.27 | -0.27 | 0.17 | 0.06 | -0.13 | 0.05 | - |
| Pearson p-value (two tailed) |
4.50E-01 | 4.50E-01 | 6.48E-01 | 8.80E-01 | 7.12E-01 | 8.92E-01 | - |
| Stats for COX1 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.3 - 44.6% | 55.4 - 57.7% | 391 - 423 | 247 - 269 | 422 - 450 | 425 - 441 | 30.1 - 57.0 |
| Median | 43.5% | 56.6% | 422 | 254 | 444 | 434 | 43.5 |
| Average ± stdev | 43.4 ± 0.6% | 56.6 ± 0.6% | 415 ± 10 | 255 ± 8 | 441 ± 7 | 432 ± 5 | 40.0 ± 9.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.03 | 0.03 | 0.02 | 0.01 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.28 | 0.28 | -0.45 | 0.28 | 0.28 | 0.08 | - |
| Pearson p-value (two tailed) |
4.33E-01 | 4.33E-01 | 1.95E-01 | 4.38E-01 | 4.26E-01 | 8.28E-01 | - |
| Stats for COX2 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.6 - 43.6% | 56.4 - 60.4% | 179 - 205 | 89 - 97 | 167 - 183 | 219 - 234 | 30.1 - 57.0 |
| Median | 41.8% | 58.3% | 193 | 93 | 173 | 226 | 43.5 |
| Average ± stdev | 41.5 ± 1.2% | 58.5 ± 1.2% | 191 ± 7 | 93 ± 2 | 174 ± 4 | 225 ± 5 | 40.0 ± 9.0 |
| Coefficient of variation | 0.03 | 0.02 | 0.04 | 0.03 | 0.02 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.43 | 0.43 | -0.54 | 0.29 | 0.44 | 0.31 | - |
| Pearson p-value (two tailed) |
2.14E-01 | 2.14E-01 | 1.07E-01 | 4.10E-01 | 2.08E-01 | 3.82E-01 | - |
| Stats for COX3 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.6 - 47.1% | 52.9 - 56.4% | 228 - 249 | 112 - 122 | 202 - 224 | 211 - 222 | 30.1 - 57.0 |
| Median | 46.4% | 54.3% | 242 | 120 | 211 | 215 | 43.5 |
| Average ± stdev | 45.6 ± 1.3% | 54.4 ± 1.3% | 239 ± 7 | 118 ± 3 | 211 ± 6 | 215 ± 3 | 40.0 ± 9.0 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.03 | 0.03 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.68 | 0.68 | -0.70 | -0.48 | 0.68 | 0.55 | - |
| Pearson p-value (two tailed) |
2.90E-02 | 2.90E-02 | 2.39E-02 | 1.59E-01 | 3.16E-02 | 9.67E-02 | - |
| Stats for CYTB (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 46.7% | 53.3 - 56.1% | 364 - 388 | 134 - 151 | 280 - 303 | 318 - 338 | 30.1 - 57.0 |
| Median | 45.4% | 54.6% | 370 | 144 | 301 | 328 | 43.5 |
| Average ± stdev | 45.1 ± 0.8% | 54.9 ± 0.8% | 370 ± 6 | 143 ± 4 | 298 ± 6 | 327 ± 6 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.03 | 0.02 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.37 | 0.37 | -0.42 | -0.12 | 0.27 | 0.24 | - |
| Pearson p-value (two tailed) |
2.87E-01 | 2.87E-01 | 2.32E-01 | 7.44E-01 | 4.56E-01 | 4.98E-01 | - |
| Stats for ND1 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.1 - 43.4% | 56.6 - 58.9% | 283 - 302 | 102 - 113 | 236 - 261 | 293 - 321 | 30.1 - 57.0 |
| Median | 42.3% | 57.7% | 298 | 109 | 253 | 298 | 43.5 |
| Average ± stdev | 42.2 ± 0.7% | 57.8 ± 0.7% | 294 ± 5 | 108 ± 2 | 249 ± 8 | 303 ± 9 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.03 | 0.03 | 0.03 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.00 | 0.00 | -0.02 | 0.08 | -0.27 | 0.25 | - |
| Pearson p-value (two tailed) |
1.00E+00 | 1.00E+00 | 9.67E-01 | 8.18E-01 | 4.55E-01 | 4.84E-01 | - |
| Stats for ND2 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.8 - 40.5% | 59.5 - 62.2% | 307 - 331 | 81 - 95 | 252 - 270 | 362 - 392 | 30.1 - 57.0 |
| Median | 40.1% | 61.1% | 322 | 89 | 258 | 371 | 43.5 |
| Average ± stdev | 39.3 ± 1.1% | 60.7 ± 1.1% | 319 ± 8 | 89 ± 3 | 258 ± 5 | 374 ± 10 | 40.0 ± 9.0 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.04 | 0.02 | 0.03 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.71 | 0.71 | -0.75 | -0.22 | 0.85 | 0.37 | - |
| Pearson p-value (two tailed) |
2.10E-02 | 2.10E-02 | 1.29E-02 | 5.42E-01 | 1.80E-03 | 2.86E-01 | - |
| Stats for ND3 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.6 - 43.4% | 56.6 - 60.4% | 97 - 106 | 36 - 46 | 90 - 95 | 106 - 115 | 30.1 - 57.0 |
| Median | 42.5% | 57.6% | 104 | 42 | 92 | 109 | 43.5 |
| Average ± stdev | 41.8 ± 1.4% | 58.2 ± 1.4% | 102 ± 2 | 42 ± 2 | 91 ± 1 | 109 ± 2 | 40.0 ± 9.0 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.07 | 0.02 | 0.03 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.51 | 0.51 | -0.48 | -0.37 | 0.67 | 0.33 | - |
| Pearson p-value (two tailed) |
1.31E-01 | 1.31E-01 | 1.58E-01 | 2.88E-01 | 3.58E-02 | 3.49E-01 | - |
| Stats for ND4 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.8 - 42.3% | 57.7 - 60.2% | 402 - 431 | 142 - 152 | 352 - 376 | 438 - 462 | 30.1 - 57.0 |
| Median | 41.4% | 58.6% | 426 | 146 | 359 | 447 | 43.5 |
| Average ± stdev | 41.2 ± 0.8% | 58.8 ± 0.8% | 421 ± 9 | 146 ± 3 | 360 ± 6 | 449 ± 6 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.09 | 0.09 | -0.31 | 0.56 | 0.11 | 0.04 | - |
| Pearson p-value (two tailed) |
7.95E-01 | 7.95E-01 | 3.86E-01 | 8.90E-02 | 7.72E-01 | 9.11E-01 | - |
| Stats for ND4L (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.4 - 41.8% | 58.2 - 64.6% | 74 - 87 | 31 - 39 | 85 - 101 | 85 - 91 | 30.1 - 57.0 |
| Median | 40.4% | 59.6% | 84 | 37 | 88 | 89 | 43.5 |
| Average ± stdev | 40.1 ± 2.1% | 59.9 ± 2.1% | 82 ± 3 | 36 ± 2 | 89 ± 4 | 88 ± 1 | 40.0 ± 9.0 |
| Coefficient of variation | 0.05 | 0.03 | 0.05 | 0.06 | 0.05 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.33 | 0.33 | -0.27 | -0.41 | 0.22 | 0.49 | - |
| Pearson p-value (two tailed) |
3.45E-01 | 3.45E-01 | 4.59E-01 | 2.41E-01 | 5.49E-01 | 1.47E-01 | - |
| Stats for ND5 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.6 - 43.5% | 56.5 - 58.4% | 573 - 594 | 181 - 206 | 455 - 475 | 555 - 601 | 30.1 - 57.0 |
| Median | 43.2% | 57.2% | 585 | 196 | 464 | 576 | 43.5 |
| Average ± stdev | 42.8 ± 0.8% | 57.2 ± 0.8% | 584 ± 6 | 193 ± 7 | 463 ± 6 | 576 ± 15 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.04 | 0.01 | 0.03 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.71 | 0.71 | -0.67 | -0.56 | 0.51 | 0.45 | - |
| Pearson p-value (two tailed) |
2.23E-02 | 2.23E-02 | 3.27E-02 | 8.99E-02 | 1.35E-01 | 1.96E-01 | - |
| Stats for ND6 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.6 - 40.5% | 59.5 - 61.4% | 167 - 175 | 35 - 41 | 91 - 103 | 217 - 230 | 30.1 - 57.0 |
| Median | 39.8% | 60.2% | 173 | 39 | 97 | 219 | 43.5 |
| Average ± stdev | 39.8 ± 0.6% | 60.2 ± 0.6% | 171 ± 2 | 38 ± 2 | 97 ± 3 | 221 ± 4 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.06 | 0.04 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.23 | 0.23 | -0.22 | -0.04 | -0.19 | 0.29 | - |
| Pearson p-value (two tailed) |
5.14E-01 | 5.14E-01 | 5.42E-01 | 9.07E-01 | 5.99E-01 | 4.09E-01 | - |
| Stats for 12S rRNA gene (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.2 - 42.4% | 57.6 - 59.8% | 228 - 239 | 160 - 176 | 202 - 213 | 353 - 370 | 30.1 - 57.0 |
| Median | 41.8% | 58.2% | 235 | 172 | 210 | 358 | 43.5 |
| Average ± stdev | 41.5 ± 0.8% | 58.5 ± 0.8% | 234 ± 3 | 169 ± 5 | 208 ± 3 | 359 ± 5 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.03 | 0.02 | 0.02 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.51 | 0.51 | -0.18 | -0.56 | 0.21 | 0.51 | - |
| Pearson p-value (two tailed) |
1.33E-01 | 1.33E-01 | 6.22E-01 | 9.42E-02 | 5.56E-01 | 1.32E-01 | - |
| Stats for 16S rRNA gene (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.9 - 38.9% | 61.1 - 63.1% | 338 - 355 | 244 - 261 | 370 - 399 | 579 - 603 | 30.1 - 57.0 |
| Median | 38.6% | 61.6% | 350 | 259 | 392 | 583 | 43.5 |
| Average ± stdev | 38.3 ± 0.6% | 61.7 ± 0.6% | 347 ± 5 | 257 ± 4 | 388 ± 8 | 585 ± 7 | 40.0 ± 9.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | 0.01 | 0.22 |
| Pearson correlation coefficient with log10MLS |
-0.20 | 0.20 | -0.23 | -0.04 | 0.19 | 0.06 | - |
| Pearson p-value (two tailed) |
5.88E-01 | 5.88E-01 | 5.14E-01 | 9.02E-01 | 5.90E-01 | 8.80E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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