Stats for order Lepidosireniformes

Browsing families:
Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 37.2 62.8 3748 2359 5133 5163 8.3
Protopterus annectens 42.0 58.0 4413 2583 4852 4809 18.0
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.4 63.6 2702 1455 3746 3507 8.3
Protopterus annectens 41.9 58.1 3180 1586 3447 3150 18.0
Stats for D-loop (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.9 63.1 211 148 325 290 8.3
Protopterus annectens 37.3 62.7 262 182 394 351 18.0
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 40.8 59.2 346 278 411 494 8.3
Protopterus annectens 44.4 55.6 381 302 388 466 18.0
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 38.6 61.4 491 477 655 885 8.3
Protopterus annectens 42.6 57.4 573 504 613 836 18.0
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.8 63.2 182 80 243 206 8.3
Protopterus annectens 40.9 59.1 195 84 215 188 18.0
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 29.1 70.9 38 10 57 60 8.3
Protopterus annectens 36.9 63.1 49 13 51 55 18.0
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 38.9 61.1 349 255 507 443 8.3
Protopterus annectens 44.6 55.4 409 281 475 383 18.0
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 37.5 62.5 161 101 208 229 8.3
Protopterus annectens 41.4 58.6 176 110 190 215 18.0
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 39.4 60.6 207 123 264 243 8.3
Protopterus annectens 44.5 55.5 217 132 236 199 18.0
Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 38.0 62.0 292 141 368 339 8.3
Protopterus annectens 42.7 57.3 337 151 355 301 18.0
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 34.7 65.3 215 121 339 294 8.3
Protopterus annectens 40.8 59.2 264 131 311 261 18.0
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 34.3 65.7 239 115 355 323 8.3
Protopterus annectens 41.0 59.0 293 130 310 299 18.0
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.8 63.2 73 56 133 89 8.3
Protopterus annectens 37.9 62.1 85 46 125 90 18.0
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 33.6 66.4 306 157 467 448 8.3
Protopterus annectens 40.8 59.2 391 174 442 377 18.0
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 42.1 57.9 88 37 97 75 8.3
Protopterus annectens 46.5 53.5 88 50 87 72 18.0
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 35.5 64.5 431 218 619 562 8.3
Protopterus annectens 40.5 59.5 517 227 564 528 18.0
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 36.5 63.5 136 50 105 219 8.3
Protopterus annectens 43.9 56.1 165 60 94 194 18.0
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 40.8 59.2 199 180 237 314 8.3
Protopterus annectens 45.8 54.2 232 196 208 298 18.0
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lepidosiren paradoxa 37.3 62.7 292 297 418 571 8.3
Protopterus annectens 40.8 59.2 341 308 405 538 18.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.