Viewing data for Anser fabalis


Scientific name Anser fabalis
Common name Bean goose
Maximum lifespan 25.60 years (Anser fabalis@AnAge)

Total mtDNA (size: 16688 bases) GC AT G C A T
Base content (bases) 7877 8811 5314 2563 3793 5018
Base content per 1 kb (bases) 472 528 318 154 227 301
Base content (%) 47.2% 52.8%
Total protein-coding genes (size: 11345 bases) GC AT G C A T
Base content (bases) 5444 5901 3864 1580 2562 3339
Base content per 1 kb (bases) 480 520 341 139 226 294
Base content (%) 48.0% 52.0%
D-loop (size: 1182 bases) GC AT G C A T
Base content (bases) 547 635 368 179 314 321
Base content per 1 kb (bases) 463 537 311 151 266 272
Base content (%) 46.3% 53.7%
Total tRNA-coding genes (size: 1534 bases) GC AT G C A T
Base content (bases) 654 880 389 265 373 507
Base content per 1 kb (bases) 426 574 254 173 243 331
Base content (%) 42.6% 57.4%
Total rRNA-coding genes (size: 2255 bases) GC AT G C A T
Base content (bases) 1038 1217 574 464 468 749
Base content per 1 kb (bases) 460 540 255 206 208 332
Base content (%) 46.0% 54.0%
12S rRNA gene (size: 984 bases) GC AT G C A T
Base content (bases) 481 503 260 221 200 303
Base content per 1 kb (bases) 489 511 264 225 203 308
Base content (%) 48.9% 51.1%
16S rRNA gene (size: 1271 bases) GC AT G C A T
Base content (bases) 557 714 314 243 268 446
Base content per 1 kb (bases) 438 562 247 191 211 351
Base content (%) 43.8% 56.2%

ATP6 (size: 684 bases) GC AT G C A T
Base content (bases) 313 371 238 75 159 212
Base content per 1 kb (bases) 458 542 348 110 232 310
Base content (%) 45.8% 54.2%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 76 92 65 11 34 58
Base content per 1 kb (bases) 452 548 387 65 202 345
Base content (%) 45.2% 54.8%
COX1 (size: 1551 bases) GC AT G C A T
Base content (bases) 749 802 493 256 379 423
Base content per 1 kb (bases) 483 517 318 165 244 273
Base content (%) 48.3% 51.7%
COX2 (size: 687 bases) GC AT G C A T
Base content (bases) 338 349 229 109 157 192
Base content per 1 kb (bases) 492 508 333 159 229 279
Base content (%) 49.2% 50.8%
COX3 (size: 785 bases) GC AT G C A T
Base content (bases) 390 395 266 124 176 219
Base content per 1 kb (bases) 497 503 339 158 224 279
Base content (%) 49.7% 50.3%
CYTB (size: 1131 bases) GC AT G C A T
Base content (bases) 554 577 395 159 259 318
Base content per 1 kb (bases) 490 510 349 141 229 281
Base content (%) 49.0% 51.0%
ND1 (size: 963 bases) GC AT G C A T
Base content (bases) 458 505 308 150 245 260
Base content per 1 kb (bases) 476 524 320 156 254 270
Base content (%) 47.6% 52.4%
ND2 (size: 1039 bases) GC AT G C A T
Base content (bases) 490 549 364 126 232 317
Base content per 1 kb (bases) 472 528 350 121 223 305
Base content (%) 47.2% 52.8%
ND3 (size: 351 bases) GC AT G C A T
Base content (bases) 178 173 121 57 86 87
Base content per 1 kb (bases) 507 493 345 162 245 248
Base content (%) 50.7% 49.3%
ND4 (size: 1379 bases) GC AT G C A T
Base content (bases) 642 737 476 166 321 416
Base content per 1 kb (bases) 466 534 345 120 233 302
Base content (%) 46.6% 53.4%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 146 151 99 47 74 77
Base content per 1 kb (bases) 492 508 333 158 249 259
Base content (%) 49.2% 50.8%
ND5 (size: 1818 bases) GC AT G C A T
Base content (bases) 853 965 615 238 390 575
Base content per 1 kb (bases) 469 531 338 131 215 316
Base content (%) 46.9% 53.1%
ND6 (size: 510 bases) GC AT G C A T
Base content (bases) 262 248 198 64 54 194
Base content per 1 kb (bases) 514 486 388 125 106 380
Base content (%) 51.4% 48.6%

ATP6 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (2.2%)
Alanine (Ala, A)
n = 15 (6.61%)
Serine (Ser, S)
n = 19 (8.37%)
Threonine (Thr, T)
n = 23 (10.13%)
Cysteine (Cys, C)
n = 1 (0.44%)
Valine (Val, V)
n = 9 (3.96%)
Leucine (Leu, L)
n = 44 (19.38%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 12 (5.29%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 10 (4.41%)
Tyrosine (Tyr, Y)
n = 4 (1.76%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 2 (0.88%)
Glutamic acid (Glu, E)
n = 6 (2.64%)
Asparagine (Asn, N)
n = 14 (6.17%)
Glutamine (Gln, Q)
n = 9 (3.96%)
Histidine (His, H)
n = 4 (1.76%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 8 (3.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 18 10 7 9 22 1 5 6 3 0 3 3 3 4 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 1 8 6 0 0 2 3 0 1 6 6 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 11 2 3 9 2 0 0 5 2 2 1 0 2 12 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 5 1 1 1 4 0 0 5 3 0 0 0 1 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
37 74 77 40
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 66 44 94
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 98 91 25
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPAPWFSIMIMTWLTLALLIQPKLLAFTTTNPPSNKTSLTTKPTPWSWPWT*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (5.45%)
Serine (Ser, S)
n = 4 (7.27%)
Threonine (Thr, T)
n = 10 (18.18%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 8 (14.55%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 3 (5.45%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 2 (3.64%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 3 (5.45%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 2 2 1 3 3 0 1 1 1 0 0 0 0 1 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 2 0 0 0 0 0 0 3 6 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 2 0 0 2 2 0 0 0 0 0 0 0 1 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
3 18 22 13
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
5 26 9 16
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 21 27 5
COX1 (size: 1551 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 44 (8.53%)
Serine (Ser, S)
n = 27 (5.23%)
Threonine (Thr, T)
n = 40 (7.75%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 34 (6.59%)
Leucine (Leu, L)
n = 61 (11.82%)
Isoleucine (Ile, I)
n = 44 (8.53%)
Methionine (Met, M)
n = 24 (4.65%)
Proline (Pro, P)
n = 31 (6.01%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 17 (3.29%)
Tryptophan (Trp, W)
n = 18 (3.49%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 10 (1.94%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 34 21 2 13 35 6 5 8 2 5 13 15 1 16 26
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 1 8 25 11 0 4 14 25 4 3 16 10 2 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 12 3 1 11 10 2 0 3 2 15 0 0 1 14 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
17 8 2 3 12 7 2 0 1 7 0 0 1 0 0 18
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
150 124 136 107
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
78 139 95 205
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
28 230 192 67
COX2 (size: 687 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.82%)
Alanine (Ala, A)
n = 13 (5.7%)
Serine (Ser, S)
n = 24 (10.53%)
Threonine (Thr, T)
n = 13 (5.7%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 16 (7.02%)
Leucine (Leu, L)
n = 29 (12.72%)
Isoleucine (Ile, I)
n = 18 (7.89%)
Methionine (Met, M)
n = 7 (3.07%)
Proline (Pro, P)
n = 16 (7.02%)
Phenylalanine (Phe, F)
n = 9 (3.95%)
Tyrosine (Tyr, Y)
n = 8 (3.51%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 13 (5.7%)
Glutamic acid (Glu, E)
n = 11 (4.82%)
Asparagine (Asn, N)
n = 5 (2.19%)
Glutamine (Gln, Q)
n = 7 (3.07%)
Histidine (His, H)
n = 11 (4.82%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 5 (2.19%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 12 6 2 10 11 3 2 7 0 4 2 7 3 2 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 3 3 7 3 0 1 3 4 3 2 5 9 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 4 1 1 9 9 2 0 3 1 7 1 1 2 3 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 9 2 1 12 4 0 0 2 2 1 0 0 1 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 65 50 50
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
27 63 60 79
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 101 82 28
COX3 (size: 785 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 21 (8.08%)
Serine (Ser, S)
n = 18 (6.92%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 13 (5.0%)
Leucine (Leu, L)
n = 31 (11.92%)
Isoleucine (Ile, I)
n = 18 (6.92%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 9 (3.46%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 6 (2.31%)
Histidine (His, H)
n = 18 (6.92%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 16 8 1 9 15 4 2 6 0 3 5 5 0 1 24
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 0 13 7 1 0 7 11 2 1 3 7 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 8 2 2 4 7 1 0 4 0 9 0 0 0 4 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
16 7 1 1 4 3 1 0 0 5 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
67 70 61 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
42 68 54 97
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 128 103 15
CYTB (size: 1131 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (6.12%)
Alanine (Ala, A)
n = 34 (9.04%)
Serine (Ser, S)
n = 25 (6.65%)
Threonine (Thr, T)
n = 22 (5.85%)
Cysteine (Cys, C)
n = 5 (1.33%)
Valine (Val, V)
n = 18 (4.79%)
Leucine (Leu, L)
n = 63 (16.76%)
Isoleucine (Ile, I)
n = 32 (8.51%)
Methionine (Met, M)
n = 9 (2.39%)
Proline (Pro, P)
n = 24 (6.38%)
Phenylalanine (Phe, F)
n = 26 (6.91%)
Tyrosine (Tyr, Y)
n = 13 (3.46%)
Tryptophan (Trp, W)
n = 11 (2.93%)
Aspartic acid (Asp, D)
n = 9 (2.39%)
Glutamic acid (Glu, E)
n = 7 (1.86%)
Asparagine (Asn, N)
n = 18 (4.79%)
Glutamine (Gln, Q)
n = 8 (2.13%)
Histidine (His, H)
n = 11 (2.93%)
Lysine (Lys, K)
n = 10 (2.66%)
Arginine (Arg, R)
n = 8 (2.13%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 30 7 3 15 32 6 7 6 2 0 6 9 3 1 25
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 5 5 21 8 0 1 7 13 2 2 6 14 2 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 6 0 1 8 13 1 0 2 1 12 1 0 4 14 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 7 0 0 9 10 0 1 2 5 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
91 107 93 86
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 103 77 148
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 185 148 25
ND1 (size: 963 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (3.13%)
Alanine (Ala, A)
n = 32 (10.0%)
Serine (Ser, S)
n = 31 (9.69%)
Threonine (Thr, T)
n = 22 (6.88%)
Cysteine (Cys, C)
n = 4 (1.25%)
Valine (Val, V)
n = 16 (5.0%)
Leucine (Leu, L)
n = 60 (18.75%)
Isoleucine (Ile, I)
n = 15 (4.69%)
Methionine (Met, M)
n = 17 (5.31%)
Proline (Pro, P)
n = 23 (7.19%)
Phenylalanine (Phe, F)
n = 15 (4.69%)
Tyrosine (Tyr, Y)
n = 15 (4.69%)
Tryptophan (Trp, W)
n = 10 (3.13%)
Aspartic acid (Asp, D)
n = 6 (1.88%)
Glutamic acid (Glu, E)
n = 9 (2.81%)
Asparagine (Asn, N)
n = 8 (2.5%)
Glutamine (Gln, Q)
n = 5 (1.56%)
Histidine (His, H)
n = 7 (2.19%)
Lysine (Lys, K)
n = 7 (2.19%)
Arginine (Arg, R)
n = 8 (2.5%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 9 13 2 14 36 4 2 3 2 3 8 3 2 4 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 4 7 12 10 3 2 2 4 2 8 7 8 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 12 1 4 5 9 3 0 10 4 11 1 2 1 7 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 5 4 1 5 4 3 1 0 5 2 0 1 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
73 99 80 69
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 98 57 123
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
34 111 123 53
ND2 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (3.19%)
Alanine (Ala, A)
n = 38 (11.01%)
Serine (Ser, S)
n = 31 (8.99%)
Threonine (Thr, T)
n = 36 (10.43%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 12 (3.48%)
Leucine (Leu, L)
n = 65 (18.84%)
Isoleucine (Ile, I)
n = 24 (6.96%)
Methionine (Met, M)
n = 20 (5.8%)
Proline (Pro, P)
n = 23 (6.67%)
Phenylalanine (Phe, F)
n = 13 (3.77%)
Tyrosine (Tyr, Y)
n = 8 (2.32%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 12 (3.48%)
Glutamine (Gln, Q)
n = 9 (2.61%)
Histidine (His, H)
n = 9 (2.61%)
Lysine (Lys, K)
n = 14 (4.06%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 17 14 7 12 29 10 7 8 1 2 4 5 1 3 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 0 3 23 10 2 0 7 4 0 2 7 14 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 19 1 2 12 8 2 0 7 0 8 1 0 3 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 4 1 0 2 13 1 0 2 1 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 102 113 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 121 59 134
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
26 141 145 34
ND3 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (3.19%)
Alanine (Ala, A)
n = 38 (11.01%)
Serine (Ser, S)
n = 31 (8.99%)
Threonine (Thr, T)
n = 36 (10.43%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 12 (3.48%)
Leucine (Leu, L)
n = 65 (18.84%)
Isoleucine (Ile, I)
n = 24 (6.96%)
Methionine (Met, M)
n = 20 (5.8%)
Proline (Pro, P)
n = 23 (6.67%)
Phenylalanine (Phe, F)
n = 13 (3.77%)
Tyrosine (Tyr, Y)
n = 8 (2.32%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 12 (3.48%)
Glutamine (Gln, Q)
n = 9 (2.61%)
Histidine (His, H)
n = 9 (2.61%)
Lysine (Lys, K)
n = 14 (4.06%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 17 14 7 12 29 10 7 8 1 2 4 5 1 3 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 0 3 23 10 2 0 7 4 0 2 7 14 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 19 1 2 12 8 2 0 7 0 8 1 0 3 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 4 1 0 2 13 1 0 2 1 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 102 113 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 121 59 134
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
26 141 145 34
ND4 (size: 1379 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (4.59%)
Alanine (Ala, A)
n = 29 (6.33%)
Serine (Ser, S)
n = 39 (8.52%)
Threonine (Thr, T)
n = 46 (10.04%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 11 (2.4%)
Leucine (Leu, L)
n = 99 (21.62%)
Isoleucine (Ile, I)
n = 39 (8.52%)
Methionine (Met, M)
n = 27 (5.9%)
Proline (Pro, P)
n = 27 (5.9%)
Phenylalanine (Phe, F)
n = 18 (3.93%)
Tyrosine (Tyr, Y)
n = 14 (3.06%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 12 (2.62%)
Glutamine (Gln, Q)
n = 15 (3.28%)
Histidine (His, H)
n = 14 (3.06%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 31 21 2 18 56 14 8 11 4 2 4 4 1 7 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 3 4 15 10 0 1 8 9 3 1 11 15 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
23 15 4 4 13 14 0 0 8 2 12 3 1 1 11 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 7 1 1 3 9 1 1 2 8 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
73 157 142 87
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
55 133 77 194
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
38 186 196 39
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 6 (6.12%)
Alanine (Ala, A)
n = 7 (7.14%)
Serine (Ser, S)
n = 14 (14.29%)
Threonine (Thr, T)
n = 6 (6.12%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 18 (18.37%)
Isoleucine (Ile, I)
n = 4 (4.08%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 3 (3.06%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 6 (6.12%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 2 4 1 2 11 2 2 2 0 0 1 4 0 0 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 2 0 5 0 2 0 4 2 0 0 1 1 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 2 0 0 5 4 2 0 3 0 1 0 0 0 3 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 2 1 0 1 0 0 0 1 1 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
22 28 23 26
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
15 26 17 41
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 45 37 7
ND5 (size: 1818 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 33 (5.45%)
Alanine (Ala, A)
n = 58 (9.59%)
Serine (Ser, S)
n = 39 (6.45%)
Threonine (Thr, T)
n = 63 (10.41%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 23 (3.8%)
Leucine (Leu, L)
n = 98 (16.2%)
Isoleucine (Ile, I)
n = 50 (8.26%)
Methionine (Met, M)
n = 33 (5.45%)
Proline (Pro, P)
n = 32 (5.29%)
Phenylalanine (Phe, F)
n = 34 (5.62%)
Tyrosine (Tyr, Y)
n = 11 (1.82%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 7 (1.16%)
Glutamic acid (Glu, E)
n = 13 (2.15%)
Asparagine (Asn, N)
n = 27 (4.46%)
Glutamine (Gln, Q)
n = 19 (3.14%)
Histidine (His, H)
n = 15 (2.48%)
Lysine (Lys, K)
n = 23 (3.8%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 43 30 5 23 53 12 4 18 1 1 6 14 2 10 24
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 6 9 33 15 1 1 6 23 3 1 15 16 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
34 21 1 4 11 13 2 1 8 0 11 1 1 5 22 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 9 4 2 5 20 3 0 3 6 0 1 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
134 168 206 98
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
70 183 115 238
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
34 264 254 54
ND6 (size: 510 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (16.57%)
Alanine (Ala, A)
n = 15 (8.88%)
Serine (Ser, S)
n = 15 (8.88%)
Threonine (Thr, T)
n = 4 (2.37%)
Cysteine (Cys, C)
n = 6 (3.55%)
Valine (Val, V)
n = 25 (14.79%)
Leucine (Leu, L)
n = 23 (13.61%)
Isoleucine (Ile, I)
n = 3 (1.78%)
Methionine (Met, M)
n = 7 (4.14%)
Proline (Pro, P)
n = 2 (1.18%)
Phenylalanine (Phe, F)
n = 14 (8.28%)
Tyrosine (Tyr, Y)
n = 5 (2.96%)
Tryptophan (Trp, W)
n = 7 (4.14%)
Aspartic acid (Asp, D)
n = 3 (1.78%)
Glutamic acid (Glu, E)
n = 1 (0.59%)
Asparagine (Asn, N)
n = 3 (1.78%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 3 (1.78%)
Lysine (Lys, K)
n = 1 (0.59%)
Arginine (Arg, R)
n = 4 (2.37%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 0 0 2 0 0 7 6 0 0 11 2 2 10 10 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 4 2 4 1 4 6 9 0 1 18 1 0 0 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 0 1 3 2 1 4 1 4 5 0 7 8 3 0 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 1 3 0 0 1 0 0 0 4 0 0 0 1 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
72 18 23 57
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 31 17 72
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
76 15 14 65
Total protein-coding genes (size: 11363 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 220 (5.81%)
Alanine (Ala, A)
n = 321 (8.48%)
Serine (Ser, S)
n = 294 (7.77%)
Threonine (Thr, T)
n = 311 (8.22%)
Cysteine (Cys, C)
n = 35 (0.92%)
Valine (Val, V)
n = 188 (4.97%)
Leucine (Leu, L)
n = 626 (16.54%)
Isoleucine (Ile, I)
n = 274 (7.24%)
Methionine (Met, M)
n = 181 (4.78%)
Proline (Pro, P)
n = 222 (5.87%)
Phenylalanine (Phe, F)
n = 224 (5.92%)
Tyrosine (Tyr, Y)
n = 107 (2.83%)
Tryptophan (Trp, W)
n = 113 (2.99%)
Aspartic acid (Asp, D)
n = 70 (1.85%)
Glutamic acid (Glu, E)
n = 87 (2.3%)
Asparagine (Asn, N)
n = 127 (3.36%)
Glutamine (Gln, Q)
n = 96 (2.54%)
Histidine (His, H)
n = 117 (3.09%)
Lysine (Lys, K)
n = 90 (2.38%)
Arginine (Arg, R)
n = 73 (1.93%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
56 218 138 37 139 312 72 53 80 16 31 57 73 27 59 165
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
43 7 28 45 172 89 15 19 61 102 38 22 83 109 8 44
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
138 113 16 26 92 97 19 2 58 17 90 16 13 23 104 20
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
97 67 20 13 57 77 13 3 18 45 7 1 2 6 1 97
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
886 1068 1046 786
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
504 1088 701 1493
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
326 1577 1459 424

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.