Scientific name | Aldrichetta forsteri |
Common name | Yellow-eye mullet |
Maximum lifespan | 7.00 years (Aldrichetta forsteri@AnAge) |
Total mtDNA (size: 16797 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 7605 | 9192 | 4861 | 2744 | 4501 | 4691 |
Base content per 1 kb (bases) | 453 | 547 | 289 | 163 | 268 | 279 |
Base content (%) | 45.3% | 54.7% |
Total protein-coding genes (size: 11456 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 5300 | 6156 | 3557 | 1743 | 3200 | 2956 |
Base content per 1 kb (bases) | 463 | 537 | 310 | 152 | 279 | 258 |
Base content (%) | 46.3% | 53.7% |
D-loop (size: 1055 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 367 | 688 | 216 | 151 | 323 | 365 |
Base content per 1 kb (bases) | 348 | 652 | 205 | 143 | 306 | 346 |
Base content (%) | 34.8% | 65.2% |
Total tRNA-coding genes (size: 1553 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 674 | 879 | 376 | 298 | 390 | 489 |
Base content per 1 kb (bases) | 434 | 566 | 242 | 192 | 251 | 315 |
Base content (%) | 43.4% | 56.6% |
Total rRNA-coding genes (size: 2637 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 1213 | 1424 | 675 | 538 | 572 | 852 |
Base content per 1 kb (bases) | 460 | 540 | 256 | 204 | 217 | 323 |
Base content (%) | 46.0% | 54.0% |
12S rRNA gene (size: 952 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 447 | 505 | 245 | 202 | 206 | 299 |
Base content per 1 kb (bases) | 470 | 530 | 257 | 212 | 216 | 314 |
Base content (%) | 47.0% | 53.0% |
16S rRNA gene (size: 1685 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 766 | 919 | 430 | 336 | 366 | 553 |
Base content per 1 kb (bases) | 455 | 545 | 255 | 199 | 217 | 328 |
Base content (%) | 45.5% | 54.5% |
ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 322 | 362 | 232 | 90 | 188 | 174 |
Base content per 1 kb (bases) | 471 | 529 | 339 | 132 | 275 | 254 |
Base content (%) | 47.1% | 52.9% |
ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 73 | 95 | 57 | 16 | 43 | 52 |
Base content per 1 kb (bases) | 435 | 565 | 339 | 95 | 256 | 310 |
Base content (%) | 43.5% | 56.5% |
COX1 (size: 1596 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 731 | 865 | 434 | 297 | 473 | 392 |
Base content per 1 kb (bases) | 458 | 542 | 272 | 186 | 296 | 246 |
Base content (%) | 45.8% | 54.2% |
COX2 (size: 691 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 300 | 391 | 188 | 112 | 197 | 194 |
Base content per 1 kb (bases) | 434 | 566 | 272 | 162 | 285 | 281 |
Base content (%) | 43.4% | 56.6% |
COX3 (size: 784 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 366 | 418 | 233 | 133 | 221 | 197 |
Base content per 1 kb (bases) | 467 | 533 | 297 | 170 | 282 | 251 |
Base content (%) | 46.7% | 53.3% |
CYTB (size: 1138 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 524 | 614 | 348 | 176 | 334 | 280 |
Base content per 1 kb (bases) | 460 | 540 | 306 | 155 | 293 | 246 |
Base content (%) | 46.0% | 54.0% |
ND1 (size: 975 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 446 | 529 | 293 | 153 | 293 | 236 |
Base content per 1 kb (bases) | 457 | 543 | 301 | 157 | 301 | 242 |
Base content (%) | 45.7% | 54.3% |
ND2 (size: 1045 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 509 | 536 | 371 | 138 | 269 | 267 |
Base content per 1 kb (bases) | 487 | 513 | 355 | 132 | 257 | 256 |
Base content (%) | 48.7% | 51.3% |
ND3 (size: 349 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 164 | 185 | 107 | 57 | 112 | 73 |
Base content per 1 kb (bases) | 470 | 530 | 307 | 163 | 321 | 209 |
Base content (%) | 47.0% | 53.0% |
ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 649 | 732 | 451 | 198 | 376 | 356 |
Base content per 1 kb (bases) | 470 | 530 | 327 | 143 | 272 | 258 |
Base content (%) | 47.0% | 53.0% |
ND4L (size: 297 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 142 | 155 | 94 | 48 | 87 | 68 |
Base content per 1 kb (bases) | 478 | 522 | 316 | 162 | 293 | 229 |
Base content (%) | 47.8% | 52.2% |
ND5 (size: 1848 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 835 | 1013 | 578 | 257 | 522 | 491 |
Base content per 1 kb (bases) | 452 | 548 | 313 | 139 | 282 | 266 |
Base content (%) | 45.2% | 54.8% |
ND6 (size: 522 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 244 | 278 | 174 | 70 | 91 | 187 |
Base content per 1 kb (bases) | 467 | 533 | 333 | 134 | 174 | 358 |
Base content (%) | 46.7% | 53.3% |
ATP6 (size: 684 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
9 | 8 | 5 | 10 | 15 | 18 | 4 | 8 | 9 | 1 | 3 | 7 | 2 | 2 | 6 | 8 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 0 | 4 | 9 | 7 | 0 | 0 | 8 | 1 | 0 | 3 | 7 | 4 | 2 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
6 | 8 | 4 | 2 | 1 | 0 | 1 | 0 | 5 | 0 | 3 | 0 | 0 | 2 | 7 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
2 | 4 | 0 | 0 | 1 | 2 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
48 | 82 | 63 | 35 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
24 | 61 | 34 | 109 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
18 | 89 | 77 | 44 |
ATP8 (size: 168 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: MPQLNPAPWFLILVFSWFVFLTIIPPKILAHTYPNEPASQSTEKPKTETWNWPWY* | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
2 | 2 | 0 | 2 | 1 | 2 | 0 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 0 | 4 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 3 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 2 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 2 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
8 | 17 | 17 | 14 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
6 | 19 | 15 | 16 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
2 | 21 | 20 | 13 |
COX1 (size: 1596 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
18 | 21 | 13 | 16 | 10 | 19 | 9 | 10 | 4 | 4 | 9 | 11 | 19 | 4 | 20 | 20 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
13 | 0 | 2 | 13 | 13 | 13 | 4 | 5 | 14 | 15 | 13 | 13 | 10 | 6 | 2 | 8 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
15 | 15 | 0 | 12 | 8 | 7 | 1 | 0 | 5 | 9 | 10 | 0 | 0 | 6 | 8 | 7 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
13 | 10 | 2 | 4 | 13 | 6 | 3 | 3 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 18 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
162 | 121 | 131 | 118 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
80 | 140 | 100 | 212 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
55 | 173 | 161 | 143 |
COX2 (size: 691 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
13 | 7 | 10 | 10 | 4 | 7 | 3 | 5 | 7 | 1 | 4 | 5 | 4 | 4 | 6 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 1 | 1 | 3 | 6 | 7 | 0 | 1 | 4 | 2 | 2 | 3 | 5 | 5 | 1 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 7 | 0 | 6 | 4 | 2 | 1 | 1 | 3 | 4 | 5 | 0 | 0 | 3 | 2 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
7 | 12 | 2 | 3 | 10 | 3 | 0 | 0 | 3 | 2 | 1 | 0 | 0 | 0 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
69 | 61 | 55 | 45 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
26 | 54 | 61 | 89 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
17 | 73 | 78 | 62 |
COX3 (size: 784 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
5 | 9 | 5 | 5 | 5 | 10 | 3 | 7 | 8 | 1 | 4 | 6 | 6 | 2 | 10 | 14 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 2 | 4 | 9 | 10 | 0 | 2 | 11 | 6 | 2 | 6 | 2 | 4 | 0 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 9 | 1 | 5 | 4 | 2 | 0 | 0 | 3 | 4 | 8 | 0 | 1 | 1 | 1 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
12 | 8 | 0 | 1 | 4 | 2 | 0 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
75 | 66 | 51 | 69 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 68 | 55 | 95 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
15 | 99 | 91 | 56 |
CYTB (size: 1138 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
15 | 12 | 4 | 16 | 19 | 19 | 1 | 6 | 4 | 1 | 8 | 10 | 7 | 3 | 8 | 20 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
6 | 0 | 4 | 2 | 11 | 17 | 2 | 2 | 11 | 8 | 3 | 8 | 7 | 6 | 1 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
8 | 8 | 1 | 8 | 6 | 6 | 1 | 1 | 1 | 6 | 9 | 0 | 2 | 6 | 12 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
10 | 4 | 1 | 3 | 10 | 9 | 0 | 0 | 1 | 6 | 1 | 0 | 0 | 0 | 0 | 13 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
102 | 102 | 86 | 89 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
51 | 95 | 77 | 156 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
23 | 151 | 117 | 88 |
ND1 (size: 975 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
13 | 10 | 8 | 14 | 15 | 20 | 2 | 12 | 8 | 0 | 7 | 5 | 5 | 2 | 9 | 11 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 0 | 7 | 11 | 12 | 3 | 2 | 7 | 4 | 5 | 6 | 10 | 4 | 3 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
12 | 5 | 1 | 3 | 8 | 7 | 1 | 3 | 1 | 5 | 6 | 1 | 2 | 4 | 5 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 5 | 5 | 1 | 3 | 5 | 2 | 1 | 1 | 4 | 1 | 0 | 0 | 1 | 0 | 7 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
84 | 91 | 77 | 73 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
37 | 97 | 52 | 139 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
32 | 105 | 107 | 81 |
ND2 (size: 1045 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
8 | 12 | 6 | 27 | 26 | 20 | 2 | 4 | 10 | 4 | 4 | 4 | 3 | 0 | 7 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 0 | 0 | 4 | 22 | 8 | 3 | 1 | 8 | 6 | 3 | 6 | 12 | 5 | 1 | 10 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
10 | 20 | 3 | 3 | 5 | 9 | 0 | 1 | 2 | 2 | 5 | 2 | 1 | 3 | 8 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 4 | 2 | 0 | 0 | 7 | 2 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
72 | 125 | 99 | 52 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
36 | 121 | 55 | 136 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
30 | 125 | 113 | 80 |
ND3 (size: 1045 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
8 | 12 | 6 | 27 | 26 | 20 | 2 | 4 | 10 | 4 | 4 | 4 | 3 | 0 | 7 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 0 | 0 | 4 | 22 | 8 | 3 | 1 | 8 | 6 | 3 | 6 | 12 | 5 | 1 | 10 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
10 | 20 | 3 | 3 | 5 | 9 | 0 | 1 | 2 | 2 | 5 | 2 | 1 | 3 | 8 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 4 | 2 | 0 | 0 | 7 | 2 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
72 | 125 | 99 | 52 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
36 | 121 | 55 | 136 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
30 | 125 | 113 | 80 |
ND4 (size: 1381 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
18 | 18 | 17 | 22 | 28 | 33 | 4 | 8 | 12 | 0 | 5 | 8 | 2 | 0 | 9 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 1 | 4 | 7 | 18 | 18 | 1 | 4 | 13 | 4 | 4 | 7 | 15 | 3 | 0 | 7 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
18 | 13 | 1 | 4 | 11 | 5 | 2 | 3 | 8 | 6 | 7 | 2 | 1 | 6 | 6 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
8 | 7 | 6 | 1 | 3 | 9 | 0 | 3 | 3 | 5 | 0 | 0 | 0 | 0 | 0 | 15 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
101 | 146 | 131 | 82 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
69 | 130 | 74 | 187 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
28 | 175 | 151 | 106 |
ND4L (size: 297 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
2 | 2 | 2 | 6 | 4 | 9 | 0 | 4 | 2 | 0 | 1 | 0 | 0 | 1 | 3 | 3 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 1 | 2 | 1 | 8 | 6 | 0 | 1 | 3 | 0 | 1 | 1 | 0 | 1 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
1 | 2 | 0 | 1 | 3 | 4 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 2 | 1 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
3 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
25 | 29 | 21 | 24 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
15 | 30 | 13 | 41 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
8 | 35 | 34 | 22 |
ND5 (size: 1848 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
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Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
26 | 26 | 19 | 18 | 27 | 31 | 5 | 15 | 14 | 4 | 7 | 13 | 7 | 4 | 18 | 23 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 5 | 2 | 12 | 17 | 21 | 2 | 3 | 20 | 7 | 0 | 6 | 18 | 1 | 4 | 12 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
24 | 16 | 2 | 8 | 18 | 9 | 1 | 2 | 13 | 3 | 12 | 1 | 4 | 9 | 16 | 9 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
7 | 7 | 4 | 3 | 11 | 16 | 4 | 1 | 4 | 5 | 2 | 0 | 0 | 1 | 0 | 13 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
138 | 156 | 189 | 133 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
78 | 171 | 120 | 247 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
41 | 251 | 182 | 142 |
ND6 (size: 522 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
4 | 1 | 4 | 5 | 0 | 2 | 4 | 11 | 0 | 0 | 10 | 1 | 9 | 6 | 7 | 2 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 2 | 0 | 9 | 2 | 5 | 1 | 4 | 2 | 5 | 17 | 2 | 1 | 2 | 1 | 0 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
1 | 3 | 0 | 3 | 2 | 1 | 0 | 3 | 1 | 4 | 3 | 2 | 9 | 2 | 0 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 2 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 4 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
78 | 21 | 24 | 51 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
44 | 33 | 17 | 80 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
52 | 16 | 50 | 56 |
Total protein-coding genes (size: 11478 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
140 | 131 | 95 | 156 | 162 | 196 | 41 | 92 | 81 | 18 | 62 | 73 | 66 | 28 | 107 | 127 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
62 | 10 | 18 | 70 | 131 | 125 | 16 | 26 | 103 | 60 | 51 | 66 | 93 | 45 | 18 | 57 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
109 | 111 | 13 | 60 | 75 | 53 | 8 | 14 | 46 | 45 | 71 | 10 | 21 | 46 | 69 | 35 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
68 | 70 | 30 | 17 | 60 | 64 | 11 | 12 | 16 | 37 | 10 | 0 | 0 | 6 | 1 | 110 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
988 | 1054 | 968 | 814 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
523 | 1050 | 692 | 1559 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
338 | 1352 | 1211 | 923 |