Scientific name | Hemignathus munroi |
Common name | Akiapolaau |
Maximum lifespan | 13.00 years (Hemignathus munroi@AnAge) |
Total mtDNA (size: 15311 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 6946 | 8361 | 4894 | 2052 | 3704 | 4657 |
Base content per 1 kb (bases) | 454 | 546 | 320 | 134 | 242 | 304 |
Base content (%) | 45.4% | 54.6% |
Total protein-coding genes (size: 11379 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 5264 | 6113 | 3852 | 1412 | 2707 | 3406 |
Base content per 1 kb (bases) | 463 | 537 | 339 | 124 | 238 | 299 |
Base content (%) | 46.3% | 53.7% |
Total tRNA-coding genes (size: 1470 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 610 | 860 | 357 | 253 | 377 | 483 |
Base content per 1 kb (bases) | 415 | 585 | 243 | 172 | 256 | 329 |
Base content (%) | 41.5% | 58.5% |
Total rRNA-coding genes (size: 1132 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 499 | 631 | 278 | 221 | 255 | 376 |
Base content per 1 kb (bases) | 441 | 557 | 246 | 195 | 225 | 332 |
Base content (%) | 44.1% | 55.7% |
12S rRNA gene (size: 71 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 28 | 41 | 15 | 13 | 23 | 18 |
Base content per 1 kb (bases) | 394 | 577 | 211 | 183 | 324 | 254 |
Base content (%) | 39.4% | 57.7% |
16S rRNA gene (size: 1061 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 471 | 590 | 263 | 208 | 232 | 358 |
Base content per 1 kb (bases) | 444 | 556 | 248 | 196 | 219 | 337 |
Base content (%) | 44.4% | 55.6% |
ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 309 | 375 | 244 | 65 | 161 | 214 |
Base content per 1 kb (bases) | 452 | 548 | 357 | 95 | 235 | 313 |
Base content (%) | 45.2% | 54.8% |
ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 75 | 93 | 63 | 12 | 44 | 49 |
Base content per 1 kb (bases) | 446 | 554 | 375 | 71 | 262 | 292 |
Base content (%) | 44.6% | 55.4% |
COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 740 | 811 | 486 | 254 | 381 | 430 |
Base content per 1 kb (bases) | 477 | 523 | 313 | 164 | 246 | 277 |
Base content (%) | 47.7% | 52.3% |
COX2 (size: 685 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 313 | 371 | 209 | 104 | 162 | 209 |
Base content per 1 kb (bases) | 457 | 542 | 305 | 152 | 236 | 305 |
Base content (%) | 45.7% | 54.2% |
COX3 (size: 784 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 376 | 408 | 252 | 124 | 194 | 214 |
Base content per 1 kb (bases) | 480 | 520 | 321 | 158 | 247 | 273 |
Base content (%) | 48.0% | 52.0% |
CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 541 | 602 | 393 | 148 | 271 | 331 |
Base content per 1 kb (bases) | 473 | 527 | 344 | 129 | 237 | 290 |
Base content (%) | 47.3% | 52.7% |
ND1 (size: 978 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 441 | 537 | 299 | 142 | 280 | 257 |
Base content per 1 kb (bases) | 451 | 549 | 306 | 145 | 286 | 263 |
Base content (%) | 45.1% | 54.9% |
ND2 (size: 1040 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 454 | 586 | 354 | 100 | 262 | 324 |
Base content per 1 kb (bases) | 437 | 563 | 340 | 96 | 252 | 312 |
Base content (%) | 43.7% | 56.3% |
ND3 (size: 351 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 160 | 191 | 115 | 45 | 92 | 99 |
Base content per 1 kb (bases) | 456 | 544 | 328 | 128 | 262 | 282 |
Base content (%) | 45.6% | 54.4% |
ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 643 | 735 | 494 | 149 | 312 | 423 |
Base content per 1 kb (bases) | 467 | 533 | 358 | 108 | 226 | 307 |
Base content (%) | 46.7% | 53.3% |
ND4L (size: 297 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 143 | 154 | 109 | 34 | 73 | 81 |
Base content per 1 kb (bases) | 481 | 519 | 367 | 114 | 246 | 273 |
Base content (%) | 48.1% | 51.9% |
ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 823 | 994 | 627 | 196 | 422 | 572 |
Base content per 1 kb (bases) | 453 | 547 | 345 | 108 | 232 | 315 |
Base content (%) | 45.3% | 54.7% |
ND6 (size: 519 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 251 | 268 | 210 | 41 | 57 | 211 |
Base content per 1 kb (bases) | 484 | 516 | 405 | 79 | 110 | 407 |
Base content (%) | 48.4% | 51.6% |
ATP6 (size: 684 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
3 | 15 | 5 | 3 | 13 | 40 | 1 | 3 | 8 | 0 | 1 | 3 | 5 | 0 | 0 | 12 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 0 | 1 | 10 | 4 | 0 | 0 | 4 | 4 | 0 | 3 | 4 | 9 | 0 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
6 | 12 | 1 | 1 | 4 | 6 | 0 | 0 | 4 | 1 | 2 | 0 | 0 | 0 | 9 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 4 | 0 | 1 | 2 | 4 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 4 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
39 | 89 | 66 | 34 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
21 | 65 | 35 | 107 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
5 | 90 | 113 | 20 |
ATP8 (size: 168 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: MPQLNPAPWFFIMIISWLTFSFIIQPKLLSFVSMNPPSNKPPATPSTTPWTWPWT* | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
2 | 3 | 1 | 0 | 2 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 2 | 3 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 4 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
4 | 0 | 0 | 0 | 2 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
3 | 17 | 20 | 16 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
6 | 24 | 8 | 18 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
3 | 22 | 21 | 10 |
COX1 (size: 1551 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
11 | 26 | 18 | 7 | 14 | 39 | 2 | 2 | 9 | 0 | 3 | 17 | 18 | 3 | 6 | 37 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 0 | 1 | 7 | 23 | 16 | 0 | 6 | 11 | 27 | 3 | 3 | 11 | 14 | 2 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
18 | 16 | 0 | 5 | 8 | 11 | 0 | 0 | 4 | 7 | 10 | 0 | 0 | 3 | 12 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
15 | 9 | 1 | 2 | 13 | 9 | 0 | 2 | 1 | 5 | 0 | 0 | 1 | 0 | 0 | 17 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
159 | 128 | 126 | 104 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
78 | 137 | 94 | 208 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
17 | 221 | 210 | 69 |
COX2 (size: 685 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
5 | 10 | 11 | 5 | 8 | 10 | 4 | 2 | 6 | 0 | 3 | 5 | 7 | 1 | 1 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 3 | 3 | 8 | 7 | 0 | 0 | 1 | 8 | 0 | 1 | 4 | 7 | 0 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 7 | 0 | 6 | 5 | 6 | 0 | 0 | 5 | 1 | 6 | 0 | 0 | 2 | 5 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
9 | 10 | 1 | 4 | 9 | 3 | 1 | 1 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
67 | 60 | 58 | 42 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
28 | 61 | 57 | 81 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
9 | 88 | 93 | 37 |
COX3 (size: 784 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
4 | 11 | 4 | 4 | 6 | 19 | 4 | 1 | 9 | 0 | 2 | 5 | 7 | 1 | 3 | 19 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 1 | 3 | 11 | 10 | 0 | 2 | 6 | 12 | 0 | 2 | 5 | 6 | 0 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
6 | 9 | 0 | 4 | 6 | 4 | 0 | 1 | 3 | 0 | 10 | 1 | 0 | 2 | 2 | 6 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
9 | 6 | 1 | 0 | 5 | 4 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
71 | 75 | 54 | 61 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 71 | 54 | 93 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
10 | 106 | 106 | 39 |
CYTB (size: 1143 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
9 | 26 | 6 | 5 | 16 | 35 | 4 | 3 | 8 | 0 | 3 | 5 | 13 | 2 | 3 | 24 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 4 | 3 | 17 | 7 | 1 | 2 | 8 | 13 | 1 | 2 | 11 | 11 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 14 | 1 | 1 | 11 | 9 | 0 | 0 | 1 | 1 | 11 | 0 | 0 | 3 | 18 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
11 | 7 | 0 | 1 | 7 | 10 | 0 | 1 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
90 | 112 | 100 | 79 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
48 | 99 | 79 | 155 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
10 | 182 | 152 | 37 |
ND1 (size: 978 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
12 | 10 | 7 | 10 | 13 | 30 | 8 | 7 | 5 | 1 | 1 | 4 | 7 | 4 | 7 | 10 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 1 | 2 | 7 | 11 | 11 | 2 | 2 | 5 | 6 | 0 | 8 | 10 | 6 | 0 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
5 | 8 | 0 | 5 | 7 | 8 | 0 | 3 | 3 | 6 | 10 | 3 | 0 | 5 | 9 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
2 | 7 | 4 | 1 | 3 | 5 | 2 | 2 | 1 | 5 | 0 | 1 | 0 | 0 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
75 | 101 | 79 | 71 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
39 | 93 | 60 | 134 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
28 | 105 | 118 | 75 |
ND2 (size: 1040 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
14 | 19 | 15 | 6 | 23 | 26 | 3 | 7 | 8 | 2 | 0 | 5 | 2 | 0 | 3 | 9 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 0 | 1 | 5 | 6 | 12 | 0 | 1 | 4 | 5 | 2 | 4 | 9 | 8 | 0 | 13 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
18 | 12 | 1 | 3 | 13 | 10 | 1 | 0 | 6 | 4 | 3 | 0 | 1 | 1 | 11 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
8 | 3 | 2 | 0 | 1 | 14 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
48 | 102 | 131 | 65 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
33 | 115 | 58 | 140 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
19 | 137 | 134 | 56 |
ND3 (size: 1040 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
14 | 19 | 15 | 6 | 23 | 26 | 3 | 7 | 8 | 2 | 0 | 5 | 2 | 0 | 3 | 9 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 0 | 1 | 5 | 6 | 12 | 0 | 1 | 4 | 5 | 2 | 4 | 9 | 8 | 0 | 13 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
18 | 12 | 1 | 3 | 13 | 10 | 1 | 0 | 6 | 4 | 3 | 0 | 1 | 1 | 11 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
8 | 3 | 2 | 0 | 1 | 14 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
48 | 102 | 131 | 65 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
33 | 115 | 58 | 140 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
19 | 137 | 134 | 56 |
ND4 (size: 1378 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
9 | 33 | 17 | 5 | 30 | 55 | 2 | 7 | 12 | 2 | 1 | 5 | 4 | 1 | 2 | 10 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 0 | 3 | 10 | 13 | 14 | 1 | 2 | 9 | 4 | 3 | 4 | 13 | 9 | 1 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
18 | 21 | 0 | 4 | 12 | 12 | 1 | 0 | 8 | 0 | 13 | 0 | 0 | 1 | 16 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
11 | 10 | 0 | 0 | 2 | 10 | 0 | 0 | 1 | 10 | 0 | 0 | 0 | 0 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
79 | 158 | 146 | 76 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
52 | 139 | 80 | 188 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
18 | 197 | 197 | 47 |
ND4L (size: 297 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
0 | 5 | 6 | 2 | 3 | 14 | 0 | 0 | 4 | 0 | 0 | 0 | 2 | 0 | 0 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 1 | 2 | 2 | 6 | 2 | 0 | 1 | 3 | 0 | 0 | 1 | 0 | 2 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
4 | 1 | 0 | 1 | 6 | 2 | 0 | 0 | 4 | 0 | 3 | 0 | 0 | 0 | 2 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
3 | 2 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
19 | 33 | 25 | 22 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
14 | 29 | 18 | 38 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
1 | 47 | 38 | 13 |
ND5 (size: 1818 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
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Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
16 | 40 | 26 | 6 | 24 | 63 | 2 | 5 | 16 | 1 | 4 | 3 | 8 | 1 | 4 | 34 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 6 | 4 | 28 | 16 | 0 | 0 | 10 | 23 | 0 | 5 | 17 | 8 | 0 | 11 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
29 | 23 | 0 | 6 | 24 | 15 | 0 | 0 | 10 | 2 | 11 | 0 | 0 | 3 | 25 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
11 | 13 | 0 | 1 | 7 | 19 | 0 | 1 | 1 | 6 | 0 | 1 | 0 | 0 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
118 | 161 | 207 | 119 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
70 | 186 | 109 | 240 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
8 | 280 | 254 | 63 |
ND6 (size: 519 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
3 | 0 | 2 | 5 | 0 | 0 | 1 | 7 | 0 | 0 | 15 | 0 | 0 | 18 | 10 | 0 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 2 | 0 | 5 | 0 | 2 | 5 | 5 | 0 | 6 | 20 | 1 | 0 | 1 | 1 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
0 | 0 | 1 | 6 | 0 | 1 | 4 | 3 | 0 | 7 | 0 | 4 | 18 | 3 | 0 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 2 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 0 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
84 | 13 | 16 | 60 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
44 | 28 | 19 | 82 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
82 | 0 | 22 | 69 |
Total protein-coding genes (size: 11396 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
88 | 207 | 121 | 61 | 159 | 352 | 34 | 44 | 90 | 6 | 33 | 52 | 75 | 31 | 44 | 175 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
43 | 5 | 23 | 51 | 137 | 105 | 9 | 21 | 61 | 112 | 30 | 39 | 89 | 89 | 4 | 61 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
125 | 124 | 4 | 43 | 101 | 89 | 7 | 7 | 50 | 30 | 80 | 10 | 19 | 24 | 113 | 19 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
80 | 79 | 13 | 13 | 53 | 81 | 3 | 10 | 11 | 47 | 3 | 2 | 1 | 5 | 1 | 97 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
875 | 1093 | 1054 | 773 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
490 | 1077 | 690 | 1538 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
218 | 1516 | 1512 | 549 |
Failed to understand id: ?term=("Hemignathus munroi"[Organism]) AND (refseq[filter] AND mitochondrion[filter])