Scientific name | Accipiter nisus |
Common name | Sparrowhawk |
Maximum lifespan | 20.20 years (Accipiter nisus@AnAge) |
Total mtDNA (size: 18647 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 8025 | 10622 | 5643 | 2382 | 4778 | 5844 |
Base content per 1 kb (bases) | 430 | 570 | 303 | 128 | 256 | 313 |
Base content (%) | 43.0% | 57.0% |
Total protein-coding genes (size: 11377 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 5124 | 6253 | 3801 | 1323 | 2791 | 3462 |
Base content per 1 kb (bases) | 450 | 550 | 334 | 116 | 245 | 304 |
Base content (%) | 45.0% | 55.0% |
Total tRNA-coding genes (size: 1546 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 656 | 890 | 395 | 261 | 382 | 508 |
Base content per 1 kb (bases) | 424 | 576 | 255 | 169 | 247 | 329 |
Base content (%) | 42.4% | 57.6% |
Total rRNA-coding genes (size: 2573 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 1180 | 1393 | 698 | 482 | 549 | 844 |
Base content per 1 kb (bases) | 459 | 541 | 271 | 187 | 213 | 328 |
Base content (%) | 45.9% | 54.1% |
12S rRNA gene (size: 971 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 465 | 506 | 275 | 190 | 199 | 307 |
Base content per 1 kb (bases) | 479 | 521 | 283 | 196 | 205 | 316 |
Base content (%) | 47.9% | 52.1% |
16S rRNA gene (size: 1602 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 715 | 887 | 423 | 292 | 350 | 537 |
Base content per 1 kb (bases) | 446 | 554 | 264 | 182 | 218 | 335 |
Base content (%) | 44.6% | 55.4% |
ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 306 | 378 | 247 | 59 | 169 | 209 |
Base content per 1 kb (bases) | 447 | 553 | 361 | 86 | 247 | 306 |
Base content (%) | 44.7% | 55.3% |
ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 72 | 96 | 63 | 9 | 44 | 52 |
Base content per 1 kb (bases) | 429 | 571 | 375 | 54 | 262 | 310 |
Base content (%) | 42.9% | 57.1% |
COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 692 | 859 | 453 | 239 | 415 | 444 |
Base content per 1 kb (bases) | 446 | 554 | 292 | 154 | 268 | 286 |
Base content (%) | 44.6% | 55.4% |
COX2 (size: 684 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 305 | 379 | 205 | 100 | 167 | 212 |
Base content per 1 kb (bases) | 446 | 554 | 300 | 146 | 244 | 310 |
Base content (%) | 44.6% | 55.4% |
COX3 (size: 784 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 365 | 419 | 248 | 117 | 203 | 216 |
Base content per 1 kb (bases) | 466 | 534 | 316 | 149 | 259 | 276 |
Base content (%) | 46.6% | 53.4% |
CYTB (size: 1144 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 525 | 619 | 388 | 137 | 286 | 333 |
Base content per 1 kb (bases) | 459 | 541 | 339 | 120 | 250 | 291 |
Base content (%) | 45.9% | 54.1% |
ND1 (size: 975 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 429 | 546 | 319 | 110 | 252 | 294 |
Base content per 1 kb (bases) | 440 | 560 | 327 | 113 | 258 | 302 |
Base content (%) | 44.0% | 56.0% |
ND2 (size: 1041 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 458 | 583 | 364 | 94 | 253 | 330 |
Base content per 1 kb (bases) | 440 | 560 | 350 | 90 | 243 | 317 |
Base content (%) | 44.0% | 56.0% |
ND3 (size: 352 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 159 | 193 | 120 | 39 | 90 | 103 |
Base content per 1 kb (bases) | 452 | 548 | 341 | 111 | 256 | 293 |
Base content (%) | 45.2% | 54.8% |
ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 603 | 775 | 470 | 133 | 350 | 425 |
Base content per 1 kb (bases) | 438 | 562 | 341 | 97 | 254 | 308 |
Base content (%) | 43.8% | 56.2% |
ND4L (size: 297 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 142 | 155 | 102 | 40 | 74 | 81 |
Base content per 1 kb (bases) | 478 | 522 | 343 | 135 | 249 | 273 |
Base content (%) | 47.8% | 52.2% |
ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 825 | 993 | 626 | 199 | 428 | 565 |
Base content per 1 kb (bases) | 454 | 546 | 344 | 109 | 235 | 311 |
Base content (%) | 45.4% | 54.6% |
ND6 (size: 519 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 247 | 272 | 199 | 48 | 64 | 208 |
Base content per 1 kb (bases) | 476 | 524 | 383 | 92 | 123 | 401 |
Base content (%) | 47.6% | 52.4% |
ATP6 (size: 684 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
7 | 13 | 11 | 5 | 17 | 35 | 3 | 2 | 9 | 0 | 2 | 0 | 3 | 0 | 4 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 0 | 4 | 6 | 3 | 0 | 4 | 2 | 3 | 0 | 1 | 8 | 8 | 0 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
12 | 11 | 0 | 1 | 4 | 2 | 0 | 0 | 4 | 0 | 3 | 0 | 0 | 0 | 8 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
3 | 4 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 4 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
32 | 95 | 75 | 26 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
22 | 65 | 33 | 108 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
5 | 87 | 101 | 35 |
ATP8 (size: 168 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: MPQLNPTPWFLTMLLSWLIFALLIQPKLLPFIPTNTPSNKLTQTTPTLSWNWPWT* | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
2 | 1 | 0 | 2 | 2 | 5 | 0 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 3 | 4 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
7 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
1 | 21 | 20 | 14 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
5 | 22 | 10 | 19 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
3 | 20 | 22 | 11 |
COX1 (size: 1551 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
17 | 25 | 24 | 4 | 14 | 33 | 1 | 8 | 10 | 0 | 8 | 9 | 17 | 1 | 12 | 31 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 1 | 16 | 17 | 12 | 0 | 6 | 16 | 23 | 2 | 5 | 8 | 17 | 1 | 9 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
14 | 17 | 0 | 3 | 6 | 15 | 0 | 0 | 3 | 6 | 11 | 2 | 0 | 3 | 12 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
15 | 8 | 1 | 6 | 9 | 9 | 0 | 0 | 2 | 6 | 0 | 0 | 1 | 0 | 0 | 15 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
151 | 120 | 136 | 110 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
77 | 140 | 94 | 206 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
11 | 193 | 214 | 99 |
COX2 (size: 684 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
4 | 15 | 12 | 1 | 7 | 14 | 3 | 3 | 6 | 1 | 2 | 6 | 6 | 1 | 3 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 3 | 4 | 6 | 6 | 1 | 1 | 3 | 3 | 1 | 4 | 2 | 6 | 2 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
5 | 8 | 0 | 3 | 8 | 3 | 0 | 0 | 2 | 2 | 6 | 0 | 0 | 3 | 3 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 13 | 1 | 4 | 8 | 4 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
66 | 60 | 58 | 44 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
23 | 59 | 61 | 85 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
11 | 86 | 93 | 38 |
COX3 (size: 784 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
4 | 12 | 7 | 4 | 8 | 18 | 1 | 3 | 8 | 0 | 2 | 4 | 6 | 1 | 6 | 19 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 1 | 0 | 3 | 6 | 12 | 1 | 3 | 8 | 9 | 0 | 1 | 8 | 3 | 0 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
6 | 11 | 0 | 3 | 6 | 4 | 0 | 1 | 4 | 4 | 6 | 1 | 0 | 1 | 5 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
13 | 7 | 1 | 2 | 2 | 2 | 0 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
67 | 72 | 58 | 64 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 68 | 54 | 96 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
7 | 108 | 104 | 42 |
CYTB (size: 1144 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
11 | 23 | 5 | 8 | 11 | 43 | 3 | 3 | 8 | 0 | 2 | 1 | 8 | 1 | 8 | 21 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 4 | 4 | 14 | 7 | 0 | 2 | 9 | 13 | 1 | 1 | 7 | 19 | 0 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
12 | 10 | 0 | 3 | 13 | 6 | 0 | 0 | 1 | 3 | 10 | 4 | 0 | 1 | 21 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
9 | 7 | 0 | 0 | 6 | 10 | 1 | 0 | 3 | 4 | 1 | 0 | 0 | 0 | 0 | 7 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
75 | 121 | 103 | 82 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
49 | 102 | 80 | 150 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
13 | 165 | 150 | 53 |
ND1 (size: 975 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
6 | 17 | 14 | 7 | 14 | 34 | 1 | 9 | 6 | 1 | 0 | 2 | 8 | 1 | 6 | 11 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 1 | 0 | 5 | 13 | 12 | 0 | 2 | 3 | 7 | 1 | 3 | 6 | 13 | 0 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
11 | 12 | 0 | 5 | 11 | 8 | 0 | 0 | 5 | 5 | 8 | 1 | 0 | 4 | 6 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 9 | 1 | 0 | 4 | 7 | 0 | 1 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 7 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
68 | 98 | 86 | 73 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
35 | 102 | 57 | 131 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
7 | 119 | 151 | 48 |
ND2 (size: 1041 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
9 | 16 | 15 | 7 | 19 | 38 | 1 | 5 | 6 | 2 | 1 | 1 | 6 | 0 | 3 | 10 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 0 | 10 | 11 | 10 | 0 | 2 | 5 | 4 | 1 | 8 | 4 | 9 | 0 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
24 | 20 | 0 | 5 | 11 | 9 | 0 | 0 | 5 | 2 | 6 | 1 | 0 | 2 | 8 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
7 | 5 | 0 | 0 | 1 | 14 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
57 | 108 | 120 | 62 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
30 | 127 | 58 | 132 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
7 | 129 | 152 | 59 |
ND3 (size: 1041 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
9 | 16 | 15 | 7 | 19 | 38 | 1 | 5 | 6 | 2 | 1 | 1 | 6 | 0 | 3 | 10 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 0 | 10 | 11 | 10 | 0 | 2 | 5 | 4 | 1 | 8 | 4 | 9 | 0 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
24 | 20 | 0 | 5 | 11 | 9 | 0 | 0 | 5 | 2 | 6 | 1 | 0 | 2 | 8 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
7 | 5 | 0 | 0 | 1 | 14 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
57 | 108 | 120 | 62 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
30 | 127 | 58 | 132 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
7 | 129 | 152 | 59 |
ND4 (size: 1378 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
11 | 22 | 21 | 11 | 26 | 51 | 4 | 18 | 11 | 0 | 1 | 4 | 4 | 0 | 5 | 8 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 1 | 4 | 7 | 7 | 14 | 0 | 5 | 5 | 6 | 1 | 5 | 9 | 13 | 0 | 10 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
31 | 17 | 1 | 2 | 8 | 12 | 3 | 1 | 9 | 4 | 8 | 1 | 0 | 4 | 8 | 6 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
14 | 9 | 0 | 1 | 2 | 10 | 0 | 2 | 5 | 4 | 0 | 0 | 0 | 0 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
66 | 161 | 147 | 85 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
55 | 139 | 77 | 188 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
12 | 170 | 201 | 76 |
ND4L (size: 297 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
0 | 5 | 3 | 0 | 3 | 12 | 2 | 4 | 2 | 0 | 1 | 0 | 1 | 0 | 1 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 2 | 1 | 1 | 7 | 2 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 3 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
5 | 3 | 0 | 1 | 4 | 3 | 0 | 1 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
20 | 30 | 25 | 24 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
12 | 30 | 17 | 40 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
8 | 42 | 39 | 10 |
ND5 (size: 1818 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
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Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
15 | 38 | 27 | 11 | 36 | 47 | 3 | 8 | 18 | 1 | 0 | 5 | 3 | 0 | 11 | 21 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 1 | 5 | 5 | 28 | 12 | 1 | 4 | 10 | 17 | 3 | 4 | 8 | 16 | 1 | 13 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
35 | 30 | 1 | 5 | 20 | 15 | 1 | 0 | 13 | 4 | 8 | 0 | 0 | 7 | 14 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
12 | 11 | 2 | 1 | 5 | 20 | 0 | 3 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
107 | 170 | 218 | 111 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
74 | 195 | 107 | 230 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
18 | 261 | 240 | 87 |
ND6 (size: 519 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
2 | 1 | 5 | 4 | 0 | 1 | 1 | 7 | 0 | 0 | 14 | 1 | 4 | 17 | 11 | 1 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 4 | 0 | 2 | 0 | 5 | 5 | 6 | 0 | 1 | 19 | 4 | 0 | 0 | 1 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
0 | 0 | 1 | 3 | 0 | 1 | 2 | 4 | 0 | 4 | 3 | 5 | 14 | 1 | 0 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 1 | 2 | 4 | 0 | 0 | 1 | 0 | 0 | 0 | 4 | 0 | 0 | 1 | 0 | 0 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
81 | 15 | 21 | 56 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 27 | 17 | 86 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
75 | 6 | 26 | 66 |
Total protein-coding genes (size: 11394 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
90 | 196 | 146 | 65 | 164 | 345 | 25 | 77 | 91 | 5 | 33 | 33 | 67 | 22 | 71 | 150 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
24 | 11 | 18 | 62 | 121 | 96 | 9 | 36 | 63 | 88 | 32 | 38 | 66 | 115 | 5 | 64 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
169 | 143 | 3 | 36 | 94 | 82 | 6 | 7 | 49 | 35 | 72 | 15 | 14 | 29 | 91 | 31 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
87 | 81 | 10 | 18 | 42 | 81 | 3 | 8 | 20 | 37 | 6 | 0 | 1 | 8 | 1 | 90 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
813 | 1108 | 1096 | 780 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
481 | 1109 | 685 | 1522 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
181 | 1435 | 1547 | 634 |