Viewing data for Pelusios castaneus


Scientific name Pelusios castaneus
Common name West African mud turtle
Maximum lifespan 41.00 years (Pelusios castaneus@AnAge)

Total mtDNA (size: 16761 bases) GC AT G C A T
Base content (bases) 6778 9983 4730 2048 4557 5426
Base content per 1 kb (bases) 404 596 282 122 272 324
Base content (%) 40.4% 59.6%
Total protein-coding genes (size: 11277 bases) GC AT G C A T
Base content (bases) 4661 6616 3433 1228 3076 3540
Base content per 1 kb (bases) 413 587 304 109 273 314
Base content (%) 41.3% 58.7%
D-loop (size: 1180 bases) GC AT G C A T
Base content (bases) 393 787 270 123 419 368
Base content per 1 kb (bases) 333 667 229 104 355 312
Base content (%) 33.3% 66.7%
Total tRNA-coding genes (size: 1524 bases) GC AT G C A T
Base content (bases) 590 934 354 236 415 519
Base content per 1 kb (bases) 387 613 232 155 272 341
Base content (%) 38.7% 61.3%
Total rRNA-coding genes (size: 2568 bases) GC AT G C A T
Base content (bases) 1049 1519 600 449 594 925
Base content per 1 kb (bases) 408 592 234 175 231 360
Base content (%) 40.8% 59.2%
12S rRNA gene (size: 971 bases) GC AT G C A T
Base content (bases) 422 549 240 182 211 338
Base content per 1 kb (bases) 435 565 247 187 217 348
Base content (%) 43.5% 56.5%
16S rRNA gene (size: 1597 bases) GC AT G C A T
Base content (bases) 627 970 360 267 383 587
Base content per 1 kb (bases) 393 607 225 167 240 368
Base content (%) 39.3% 60.7%

ATP6 (size: 690 bases) GC AT G C A T
Base content (bases) 280 410 225 55 189 221
Base content per 1 kb (bases) 406 594 326 80 274 320
Base content (%) 40.6% 59.4%
ATP8 (size: 165 bases) GC AT G C A T
Base content (bases) 60 105 54 6 43 62
Base content per 1 kb (bases) 364 636 327 36 261 376
Base content (%) 36.4% 63.6%
COX1 (size: 1545 bases) GC AT G C A T
Base content (bases) 645 900 427 218 456 444
Base content per 1 kb (bases) 417 583 276 141 295 287
Base content (%) 41.7% 58.3%
COX2 (size: 688 bases) GC AT G C A T
Base content (bases) 279 409 202 77 177 232
Base content per 1 kb (bases) 406 594 294 112 257 337
Base content (%) 40.6% 59.4%
COX3 (size: 785 bases) GC AT G C A T
Base content (bases) 332 453 233 99 221 232
Base content per 1 kb (bases) 423 577 297 126 282 296
Base content (%) 42.3% 57.7%
CYTB (size: 1101 bases) GC AT G C A T
Base content (bases) 502 599 375 127 298 301
Base content per 1 kb (bases) 456 544 341 115 271 273
Base content (%) 45.6% 54.4%
ND1 (size: 972 bases) GC AT G C A T
Base content (bases) 399 573 285 114 298 275
Base content per 1 kb (bases) 410 590 293 117 307 283
Base content (%) 41.0% 59.0%
ND2 (size: 1044 bases) GC AT G C A T
Base content (bases) 419 625 321 98 270 355
Base content per 1 kb (bases) 401 599 307 94 259 340
Base content (%) 40.1% 59.9%
ND3 (size: 305 bases) GC AT G C A T
Base content (bases) 132 173 101 31 80 93
Base content per 1 kb (bases) 433 567 331 102 262 305
Base content (%) 43.3% 56.7%
ND4 (size: 1386 bases) GC AT G C A T
Base content (bases) 549 837 414 135 389 448
Base content per 1 kb (bases) 396 604 299 97 281 323
Base content (%) 39.6% 60.4%
ND4L (size: 299 bases) GC AT G C A T
Base content (bases) 121 178 85 36 88 90
Base content per 1 kb (bases) 405 595 284 120 294 301
Base content (%) 40.5% 59.5%
ND5 (size: 1818 bases) GC AT G C A T
Base content (bases) 722 1096 534 188 500 596
Base content per 1 kb (bases) 397 603 294 103 275 328
Base content (%) 39.7% 60.3%
ND6 (size: 504 bases) GC AT G C A T
Base content (bases) 225 279 179 46 75 204
Base content per 1 kb (bases) 446 554 355 91 149 405
Base content (%) 44.6% 55.4%

ATP6 (size: 690 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.49%)
Alanine (Ala, A)
n = 13 (5.68%)
Serine (Ser, S)
n = 15 (6.55%)
Threonine (Thr, T)
n = 33 (14.41%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 6 (2.62%)
Leucine (Leu, L)
n = 59 (25.76%)
Isoleucine (Ile, I)
n = 18 (7.86%)
Methionine (Met, M)
n = 10 (4.37%)
Proline (Pro, P)
n = 16 (6.99%)
Phenylalanine (Phe, F)
n = 9 (3.93%)
Tyrosine (Tyr, Y)
n = 3 (1.31%)
Tryptophan (Trp, W)
n = 3 (1.31%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.75%)
Asparagine (Asn, N)
n = 9 (3.93%)
Glutamine (Gln, Q)
n = 9 (3.93%)
Histidine (His, H)
n = 4 (1.75%)
Lysine (Lys, K)
n = 3 (1.31%)
Arginine (Arg, R)
n = 6 (2.62%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 11 8 7 12 22 0 17 9 0 0 0 6 0 4 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 2 8 3 0 1 3 4 0 7 2 7 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 15 0 1 6 5 0 0 3 1 2 0 1 3 6 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 4 0 0 1 3 0 1 1 4 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
32 76 76 46
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
20 74 34 102
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 75 111 41
ATP8 (size: 165 bases)
Amino acid sequence: MPQLNPYPWFSTFLTSWLILIILLLKIKSHVSNNPPTNKKNTLTTPSPWIWPWT*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 5 (9.26%)
Threonine (Thr, T)
n = 7 (12.96%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.85%)
Leucine (Leu, L)
n = 8 (14.81%)
Isoleucine (Ile, I)
n = 5 (9.26%)
Methionine (Met, M)
n = 1 (1.85%)
Proline (Pro, P)
n = 8 (14.81%)
Phenylalanine (Phe, F)
n = 2 (3.7%)
Tyrosine (Tyr, Y)
n = 1 (1.85%)
Tryptophan (Trp, W)
n = 5 (9.26%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 5 (9.26%)
Glutamine (Gln, Q)
n = 1 (1.85%)
Histidine (His, H)
n = 1 (1.85%)
Lysine (Lys, K)
n = 4 (7.41%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 4 1 2 2 2 0 2 1 0 0 0 1 0 1 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 2 0 1 3 1 0 0 0 0 1 0 0 2 3 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
1 16 22 16
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
5 20 13 17
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
0 18 27 10
COX1 (size: 1545 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 43 (8.37%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 34 (6.61%)
Threonine (Thr, T)
n = 38 (7.39%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 30 (5.84%)
Leucine (Leu, L)
n = 64 (12.45%)
Isoleucine (Ile, I)
n = 45 (8.75%)
Methionine (Met, M)
n = 32 (6.23%)
Proline (Pro, P)
n = 26 (5.06%)
Phenylalanine (Phe, F)
n = 38 (7.39%)
Tyrosine (Tyr, Y)
n = 17 (3.31%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 6 (1.17%)
Asparagine (Asn, N)
n = 22 (4.28%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 20 (3.89%)
Lysine (Lys, K)
n = 8 (1.56%)
Arginine (Arg, R)
n = 9 (1.75%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 24 30 17 12 24 0 11 7 0 7 8 15 0 10 28
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 8 18 16 0 13 7 20 3 6 8 12 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 16 0 3 13 14 0 2 2 9 8 2 0 5 17 10
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 6 0 9 6 8 0 3 2 4 0 1 0 0 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
136 115 150 114
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
75 136 95 209
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 176 199 133
COX2 (size: 688 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.07%)
Alanine (Ala, A)
n = 12 (5.26%)
Serine (Ser, S)
n = 16 (7.02%)
Threonine (Thr, T)
n = 21 (9.21%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 10 (4.39%)
Leucine (Leu, L)
n = 31 (13.6%)
Isoleucine (Ile, I)
n = 20 (8.77%)
Methionine (Met, M)
n = 14 (6.14%)
Proline (Pro, P)
n = 13 (5.7%)
Phenylalanine (Phe, F)
n = 7 (3.07%)
Tyrosine (Tyr, Y)
n = 9 (3.95%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 10 (4.39%)
Glutamic acid (Glu, E)
n = 13 (5.7%)
Asparagine (Asn, N)
n = 10 (4.39%)
Glutamine (Gln, Q)
n = 11 (4.82%)
Histidine (His, H)
n = 10 (4.39%)
Lysine (Lys, K)
n = 3 (1.32%)
Arginine (Arg, R)
n = 5 (2.19%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 13 11 9 4 11 0 6 11 0 1 4 5 0 3 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 1 5 3 4 0 3 2 2 0 2 9 2 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 12 0 1 5 8 0 1 1 3 6 0 1 3 7 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 13 0 2 8 3 0 1 1 3 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
52 63 70 44
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
21 60 66 82
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 79 96 50
COX3 (size: 785 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (6.92%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 17 (6.54%)
Threonine (Thr, T)
n = 27 (10.38%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 11 (4.23%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 18 (6.92%)
Methionine (Met, M)
n = 12 (4.62%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 9 (3.46%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 10 12 7 8 12 1 6 8 0 1 5 5 0 6 17
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 1 7 1 6 0 5 6 7 0 1 6 5 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 12 1 2 5 5 0 0 5 3 7 0 1 3 6 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 8 0 2 1 1 1 0 2 3 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 69 73 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
41 65 56 99
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 99 102 56
CYTB (size: 1101 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (6.28%)
Alanine (Ala, A)
n = 23 (6.28%)
Serine (Ser, S)
n = 25 (6.83%)
Threonine (Thr, T)
n = 32 (8.74%)
Cysteine (Cys, C)
n = 2 (0.55%)
Valine (Val, V)
n = 12 (3.28%)
Leucine (Leu, L)
n = 64 (17.49%)
Isoleucine (Ile, I)
n = 35 (9.56%)
Methionine (Met, M)
n = 9 (2.46%)
Proline (Pro, P)
n = 23 (6.28%)
Phenylalanine (Phe, F)
n = 24 (6.56%)
Tyrosine (Tyr, Y)
n = 15 (4.1%)
Tryptophan (Trp, W)
n = 11 (3.01%)
Aspartic acid (Asp, D)
n = 7 (1.91%)
Glutamic acid (Glu, E)
n = 5 (1.37%)
Asparagine (Asn, N)
n = 21 (5.74%)
Glutamine (Gln, Q)
n = 8 (2.19%)
Histidine (His, H)
n = 11 (3.01%)
Lysine (Lys, K)
n = 9 (2.46%)
Arginine (Arg, R)
n = 7 (1.91%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 24 9 8 21 20 3 12 8 0 2 3 6 1 11 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 2 5 15 3 0 3 7 10 3 6 11 6 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 9 1 6 10 5 2 0 2 1 14 1 0 6 15 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 4 1 0 7 9 0 0 3 4 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
70 101 108 88
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
45 101 77 144
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 173 116 66
ND1 (size: 972 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.95%)
Alanine (Ala, A)
n = 23 (7.12%)
Serine (Ser, S)
n = 30 (9.29%)
Threonine (Thr, T)
n = 28 (8.67%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 14 (4.33%)
Leucine (Leu, L)
n = 57 (17.65%)
Isoleucine (Ile, I)
n = 22 (6.81%)
Methionine (Met, M)
n = 16 (4.95%)
Proline (Pro, P)
n = 23 (7.12%)
Phenylalanine (Phe, F)
n = 23 (7.12%)
Tyrosine (Tyr, Y)
n = 13 (4.02%)
Tryptophan (Trp, W)
n = 8 (2.48%)
Aspartic acid (Asp, D)
n = 3 (0.93%)
Glutamic acid (Glu, E)
n = 10 (3.1%)
Asparagine (Asn, N)
n = 12 (3.72%)
Glutamine (Gln, Q)
n = 6 (1.86%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 6 (1.86%)
Arginine (Arg, R)
n = 8 (2.48%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 10 15 11 8 27 1 10 6 0 4 6 4 0 11 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 1 6 8 7 2 2 5 7 2 6 10 7 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 12 0 7 8 10 0 0 5 5 8 2 0 10 2 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 10 0 1 2 6 0 1 2 5 0 0 0 0 1 6
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
66 87 89 82
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
39 99 54 132
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 99 132 84
ND2 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.75%)
Alanine (Ala, A)
n = 22 (6.34%)
Serine (Ser, S)
n = 22 (6.34%)
Threonine (Thr, T)
n = 56 (16.14%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 61 (17.58%)
Isoleucine (Ile, I)
n = 30 (8.65%)
Methionine (Met, M)
n = 20 (5.76%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 12 (3.46%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 5 (1.44%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 16 18 9 10 23 2 17 12 1 0 4 6 0 3 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 3 0 2 11 8 1 1 2 9 1 4 6 8 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 25 1 5 7 6 0 1 3 6 4 2 0 3 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 4 0 1 0 7 2 1 1 3 0 0 0 1 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
50 92 134 72
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 114 65 133
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 115 156 65
ND3 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.75%)
Alanine (Ala, A)
n = 22 (6.34%)
Serine (Ser, S)
n = 22 (6.34%)
Threonine (Thr, T)
n = 56 (16.14%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 61 (17.58%)
Isoleucine (Ile, I)
n = 30 (8.65%)
Methionine (Met, M)
n = 20 (5.76%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 12 (3.46%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 5 (1.44%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 16 18 9 10 23 2 17 12 1 0 4 6 0 3 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 3 0 2 11 8 1 1 2 9 1 4 6 8 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 25 1 5 7 6 0 1 3 6 4 2 0 3 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 4 0 1 0 7 2 1 1 3 0 0 0 1 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
50 92 134 72
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 114 65 133
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 115 156 65
ND4 (size: 1386 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (4.56%)
Alanine (Ala, A)
n = 26 (5.64%)
Serine (Ser, S)
n = 34 (7.38%)
Threonine (Thr, T)
n = 54 (11.71%)
Cysteine (Cys, C)
n = 3 (0.65%)
Valine (Val, V)
n = 8 (1.74%)
Leucine (Leu, L)
n = 95 (20.61%)
Isoleucine (Ile, I)
n = 40 (8.68%)
Methionine (Met, M)
n = 31 (6.72%)
Proline (Pro, P)
n = 27 (5.86%)
Phenylalanine (Phe, F)
n = 20 (4.34%)
Tyrosine (Tyr, Y)
n = 10 (2.17%)
Tryptophan (Trp, W)
n = 13 (2.82%)
Aspartic acid (Asp, D)
n = 2 (0.43%)
Glutamic acid (Glu, E)
n = 9 (1.95%)
Asparagine (Asn, N)
n = 18 (3.9%)
Glutamine (Gln, Q)
n = 9 (1.95%)
Histidine (His, H)
n = 18 (3.9%)
Lysine (Lys, K)
n = 13 (2.82%)
Arginine (Arg, R)
n = 10 (2.17%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
18 22 28 11 19 35 2 28 7 2 0 1 7 0 7 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 2 1 6 11 9 0 6 5 8 2 7 9 11 0 11
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 23 1 6 9 12 2 1 4 4 6 1 0 5 13 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 7 2 0 2 13 0 1 1 7 1 0 0 0 1 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
66 131 161 104
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
52 136 80 194
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
17 147 207 91
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 8 (8.16%)
Threonine (Thr, T)
n = 8 (8.16%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 3 (3.06%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 7 (7.14%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 2 (2.04%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 4 (4.08%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 2 (2.04%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 5 6 6 6 8 1 3 4 0 0 1 2 0 3 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 2 3 1 3 1 2 1 1 1 0 1 1 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 3 1 1 1 4 0 1 1 1 0 0 0 1 1 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 2 0 1 1 2 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
20 33 28 18
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
11 24 19 45
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 28 41 25
ND5 (size: 1818 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 27 (4.46%)
Alanine (Ala, A)
n = 51 (8.43%)
Serine (Ser, S)
n = 46 (7.6%)
Threonine (Thr, T)
n = 59 (9.75%)
Cysteine (Cys, C)
n = 8 (1.32%)
Valine (Val, V)
n = 12 (1.98%)
Leucine (Leu, L)
n = 103 (17.02%)
Isoleucine (Ile, I)
n = 54 (8.93%)
Methionine (Met, M)
n = 43 (7.11%)
Proline (Pro, P)
n = 28 (4.63%)
Phenylalanine (Phe, F)
n = 34 (5.62%)
Tyrosine (Tyr, Y)
n = 21 (3.47%)
Tryptophan (Trp, W)
n = 9 (1.49%)
Aspartic acid (Asp, D)
n = 15 (2.48%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 17 (2.81%)
Glutamine (Gln, Q)
n = 14 (2.31%)
Histidine (His, H)
n = 10 (1.65%)
Lysine (Lys, K)
n = 33 (5.45%)
Arginine (Arg, R)
n = 10 (1.65%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 33 39 21 26 36 0 17 14 0 3 2 7 0 11 23
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 3 5 9 25 17 0 5 6 16 0 7 8 13 0 13
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 26 0 4 19 15 0 4 4 8 13 1 3 9 8 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 10 1 2 13 32 1 0 1 9 0 0 0 1 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
116 145 214 131
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
62 176 122 246
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 213 260 123
ND6 (size: 504 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (13.77%)
Alanine (Ala, A)
n = 13 (7.78%)
Serine (Ser, S)
n = 12 (7.19%)
Threonine (Thr, T)
n = 5 (2.99%)
Cysteine (Cys, C)
n = 3 (1.8%)
Valine (Val, V)
n = 29 (17.37%)
Leucine (Leu, L)
n = 27 (16.17%)
Isoleucine (Ile, I)
n = 6 (3.59%)
Methionine (Met, M)
n = 8 (4.79%)
Proline (Pro, P)
n = 2 (1.2%)
Phenylalanine (Phe, F)
n = 11 (6.59%)
Tyrosine (Tyr, Y)
n = 9 (5.39%)
Tryptophan (Trp, W)
n = 6 (3.59%)
Aspartic acid (Asp, D)
n = 2 (1.2%)
Glutamic acid (Glu, E)
n = 5 (2.99%)
Asparagine (Asn, N)
n = 1 (0.6%)
Glutamine (Gln, Q)
n = 1 (0.6%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.6%)
Arginine (Arg, R)
n = 3 (1.8%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 0 3 1 0 3 2 5 1 0 12 0 3 14 10 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 3 0 7 0 2 4 3 1 6 13 2 0 0 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 0 3 6 0 2 0 4 0 5 4 3 16 1 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 4 2 0 0 1 0 0 0 3 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
72 12 25 59
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
39 28 20 81
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
68 6 30 64
Total protein-coding genes (size: 11299 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 208 (5.53%)
Alanine (Ala, A)
n = 253 (6.72%)
Serine (Ser, S)
n = 268 (7.12%)
Threonine (Thr, T)
n = 378 (10.04%)
Cysteine (Cys, C)
n = 29 (0.77%)
Valine (Val, V)
n = 148 (3.93%)
Leucine (Leu, L)
n = 650 (17.27%)
Isoleucine (Ile, I)
n = 309 (8.21%)
Methionine (Met, M)
n = 204 (5.42%)
Proline (Pro, P)
n = 208 (5.53%)
Phenylalanine (Phe, F)
n = 214 (5.69%)
Tyrosine (Tyr, Y)
n = 121 (3.21%)
Tryptophan (Trp, W)
n = 105 (2.79%)
Aspartic acid (Asp, D)
n = 63 (1.67%)
Glutamic acid (Glu, E)
n = 83 (2.21%)
Asparagine (Asn, N)
n = 144 (3.83%)
Glutamine (Gln, Q)
n = 95 (2.52%)
Histidine (His, H)
n = 110 (2.92%)
Lysine (Lys, K)
n = 95 (2.52%)
Arginine (Arg, R)
n = 70 (1.86%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
131 178 181 114 136 229 12 137 92 3 32 34 67 15 81 133
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
23 15 14 62 102 81 8 44 45 94 25 48 73 87 0 74
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
138 158 8 43 88 89 4 14 30 46 75 12 22 52 92 40
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
70 75 8 20 43 90 5 8 14 44 4 1 0 7 2 93
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
755 974 1175 861
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
457 1063 720 1525
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
151 1265 1525 824

>NC_026049.1 Pelusios castaneus voucher AHNU26080283 mitochondrion, complete genome
GTTATTGTAGCTTACACTCCTCAAGCATGGCACTGAAGATGCCAAGATAGATCAAAGAATCTCATTAACA
TAAAGATTTGGTCCTGGTCTTACTGTTGTTTTTTACTGAACTTACACATGCAAGTATCCGCACCCCAGTG
AGGAGTTAACCCAGAATTACTACAAAACATAGTAAAAGGAGTTGGTATCAGGCTCATCATAATAGCCCAA
AACACCTGGCCACGCCACACCCACAAGGGATTGCAGCAGTGACAAAAATTAAGCTATGAGCGAAAGCTCG
ACTTACTTACAGTAATAAAGGGCTGGTAAACCTCGTGCCAGCAACCGCGGCTACACCAGGAGCCCAAAAC
AACAGCCCTACGGCGTAAATTGTGGCTAGAATTAACAAAAAAAATTAAGGTGGACCCTCTACCTCTTTGT
AATAAGACTGTGTTCAAAGTTACTCCAATGTAAAAACAACCTTAATCCTACCGCTCATCCGAACCCACGA
TAGCTAAGGCACAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAATCATGATATTTCACACAACA
TAAATATCCGCCAGAGAACTACGAGCTTGTAGCTTAAAACTCAAAGGACTTGGCGGTGTCCCACACCCTA
CTAGAGGAGCCTGTTCTATAAGCGATAATCCACGATAAACCTTACCACCCTTTGCCATATCAGCCTATAT
ACCGCCGTCTCCAGCTTACCTTATGAAAGCTAAAAAGTAAGCAAAATAGCCCTCTACAGCTAGTAAGTCA
GGTCCAGGTGTAGCCAATAGAGTGGATGTAATGGGCTACATTTTCTAAAATAGAAATATTCACGAACAGA
CCCTTGAAACAGGGACTAAGAAGCAGGATTTAGCAGTAATCTAGGAATAGAGAGCCTATATTAAGCCGGC
CCTGGGACAAGCACACACCGCCCGTCACCCTCCTCAACAAAACTAATAAACCCCTACATAAACAAGTAAA
CAAACAAAGAGGAGACAAGTCGTAACAAGGTAAGTGTACCGGAAGGTGTACTTGGAATACCCAAAATATA
GCTTACCCCTTAAAGCAATCAGCTTACACCTGAACGATGTCCAAAAATGGGCTATTTTGAGCAACACAGC
AGCCCTACCCCCCACCTCCTCTCTCCACCCCAATAACCTCTTTACACCTTAATCCTTAAAACATTATATA
AACTTAGTATAGGAGATAGAAAAGATTTTTAGAAGCTTTAAAGACAGTACCGCAAGGGAAAGCTGAAAAA
CATGAAACAATCACCAAGCAAAAAAAAGCAAAGATAAACCCTTGTACCTTTTGCATCATGATTTAGCTAG
CATAACCGAGACAAAAAGAATTAAAGCCTTTTTCCCCGAAACTAGATGAGCTATTTTAGGGCAACCTTAA
CAATGGTTACAATCCGTCTCTGTGGCAAAAGAGTGGAAAGACCCTTAAATAGAGGTGAAAAGCCAAACGA
ATCTAGTGATAGCTGGTTGCTCAACAAAAGAATAATAGTTCCACCTTAAATCATCCCATACGCAATACAT
AGCCCCATGAAAGATTTAAGAGCTACTCAATTAGGGAACAGCCTGATTGAGAAGGGATACAACCCATAAT
GGAGAATCAACTCAACAAAAATTAAATAGTAGGCCTTAAAGCAGCCACCACCCAAGACAGCGTTAAAGCT
CACACACCCTAAATATCAAAACCTTTGTCCATTCCCAAGTACAATTGAGCCATTCTACCCCTCTAGAAGA
ACCAATGCTAAAATTAGTAACAAGAAGACTTTTTCTCAACGCACTAGCTTACATTAGTTCAGAAATACTA
CTAATTATTAACGAAACAAATACTACAAAAATTTTAAACAGAACATATAACAACACAACCGTTAACCCAA
CACAGGAGTGCCAACTAGAAAGATTAAAATTTGTAAAAGGAACTAGGCAACTTAAGAACCCGACTGTTTA
CCAAAAACATAGCCACTAGCCCTACGAGTATTAGAGGTAACGCCTGCCCAGTGATTTATTAAACGGCCGC
AGTAACATGACTGCGCGAAGGTAGCATAATCACTTGTCTTTTAAATAGAGACTGGAATGAATGGCTACAC
GAGGTTCTATCTGTCTCTTACAAACAATCAGTGAAATTGATCCCCTCGTGCAAAAGCGAGAATGGCCTCA
TAAGACGAGAAGACCCTGTGGAACTTCAAGTACTAACCAATATATTTCTACATCTCTACCCTAAGGGAAA
GAAAACCCGAAATATTCCCTGGTTATTGCTTTCGGTTGGGGCGACCTCGGAGTAAAATAAAACCTCCGAA
AAGAGTATATTCTCATACTAAGAATAACATCTCAAAGTGATTAAAATCAAAACGATCCAATATATTTGAT
CAACGAACAAAGCTACCCCAGGGATAACAGCGCAATCCCTTCTTAGAGTCCATATTGACGATGGGGGTTT
ACGACCTCGATGTTGGATCAGGACATCCTGATGGTGCAGCAGCTATTAAGGGTTCGTTTGTTCAACGATT
AATAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTATGTACGTATATTTT
CCAGTACGAAAGGAACTAAAATATGCGACCTATAATCCAAATACGTCGCATCCCTCATCTATGTATTCAA
CTTAACTAACATAAGGGACCCAAATTAACCATGCCTAAAGCAGGTAAATTGGGGTGGCAGAGCTTGGTCA
AATGCAGAAGGCTTAAGCCCTTCACCCGGGGGTTCAACTCCCCTTCCCAATTGTTTTCCCTACTATAAAT
CTACTTCAACCCTTAATAGTTATTTTACCTATTCTCGCCAGCGTAGCCTTTTTTACCTACCTTGAACGAA
AAGTAATAAGCTGTATTCAACTACGCAAAGGACCCAGCACCGCTGGGCCCTTCGGCCTGCTACAACCCTT
TGCAGATGGCCTAAAACTATATTCTAAAGAACCAATCTACCCAACAAGCTCTTCCCTTATCCTATTTACA
CTAACTCCTACCATAGCACTAACATTAGCCCTCTCAGTCTGGTTACCTATACCCCTCCCATTTTCACTAG
CTAACCTAAATTTAGGCCTATTATTCATCCTTTCCATGTCTAGCCTTATAGTATTTTCAATCCTTTGATC
AGGATGAGCTTCCAATTCTAAATATGCCTTAATTGGAGCCCTACGTGCAGTAGCCCAAACCATCTCCTAC
GAAATCACTTTAGGCCTTATCCTAATTACCATAACCTTATTTTCCGGGGGTTTCAACATACGAACATTCA
TTACAACACAAGAACCCATTTACCTAATCTTCGCTTCATGGCCCCTAGCAATAATATGATATGTCTCCAC
CTTAGCTGAAACAAATCGAGCGCCATTTGACCTACCAGAAGGAGAATCTGAACTAGTTTCCGGATACAAT
GTCGAATACGCAGCGGGCCCTTTTACTTCATTTTTCCTAGCAGAACATGTTAATATTCTCACAATAAATA
CACTTTCCACCGTCCTATTCCTAAATCCAGGTTATCTATATACCACCCCTACTATCTTCAATATCTCACT
TATAACAACAGCCGCAATTCTTTCTCTAGGATTCATTTGAGTCCGAGCTTCTTACCCCCGCTTTCGATAC
GACCAACTAATACACCTCCTATGAAAAAATTTCCTCCCAATAACACTAGCCCTTTGCCTATGACACCTCT
CACTACTCGTCACTTTCTCAGGAATTCCCCCCATATCATAGGATACGTGCCTGAAACATTAAGGCTCACC
TTGATGAGGTGAAAATAGAGACTAAAACCCTCTCGTCTCCTTAGAATAACAGGACTCGAACCTGCCCATT
AGAAATCAAAATTCTATGTACACCCCCTATACTATATTCTAGTAAAGTCAGCTAATCAAGCTTTTGGGCC
CATACCCCAACAATGTCGGTTTAAATCCTTCCTGTACTAATCAACCCCTATGCACGTGCAGTCATTATTT
CAGGACTAACACTAGGCCCAATAATTACCATCTCCAGCAACCACTGAATCACTGCCTGATCCGGCCTAGA
AATTAGTACATTAACAATAATCCCTACAATCGCCAACAAACACCACCCCCGAGCGGTCGAAGCTTCTATC
AAGTATTTCCTCACACAAACAATAGCATCATACCTCATACTCTCAGCAACTCTTACAAATGCATGGCATT
ATGGACAATGAGATATTCAGCTACTAACAAACCACATCTCATGTATAACCCTAACCATAGCCATGTCCAT
TAAACTAGCAGTCGCCCCATTCCACTTCTGATTTCCTGAAGTACTACAAGGAGCCACTATATTAACGGCC
CTACTTTTAACCACCTGACAAAAATTAGCCCCACTAACCATTCTAGTACAATGTTCACAAAACCTGAACA
CCACATTATTAATCTTACTAGGAGTAACATCAATCTTAATTGGGGGTTGAGGAGGATTAAATCAAACCCA
ATTACGAAAAATCATGGCATTCTCCTCTATTGCCCACTTAGGATGAATATATACCATTCTCACTTTTTCT
CCAAAAATCACTCTATTAACATTCTACTTATATGTAATTATAACAACTACTACATTCCTAACAATTAACA
TCCTACAAACAAGCAACATATCTACCCTTATAACATCCTGAACAAAAACACCATTCACAAATACAATAAT
ATTACTTAACCTTATATCCTTAGCCGGACTACCCCCACTCACCGGATTCACACCTAAGTGGCTAATTTTA
CAAGAACTCACCAAACAACATCTAACTGTAATCGCTACAGTAATAGCCTTAACCTCTCTACTAAGCCTAT
ATTTCTACCTCCGCATCTCCTACCACACAATCGTCACCCTTCCCCCAACCACCTGTAACCACCACCACCA
ATGACGACTTAACATAACAAACTTTACCCCTATCCTAGCAACACTTACCCTTCTAACCACTGCCCTCCTC
CCACTGCTCCCCACTATAATAACCATTCCCTAAAGAAACTTAGGATCATTGACCCAATCCAGAAGCCTTC
AAAGCTTCAAACAAGAGACAGACCTCTTAGTTTCTGATAAGATCTATAAGACTCTACCTTATATCAACTA
AATGCAACTTAGATACTTTTATTAAGCTAAGATCTTACTAGATAAATGGGCTTTGATCCCATAAATAATT
AGTTAACAGCTAACTACCCTACTCAACTGGCTTTTATCTACAGACCCTGATACTAATTTAAAGTATTACT
TCAGATTTGCAACCTGATATGATATTCACCACAGGACCCTAGTAAGAAGAGGAATTAAACCTCTGTAAAA
AGGTTTACAACCTAACGACTCAACACTCGACCATCTTACTTATGAACTTAAACCGCTGATTATTCTCCAC
CAACCATAAAGATATTGGCACACTTTACCTAATTTTTGGAACCTGGGCAGGAATAATCGGTACCGCCCTT
AGTCTTCTTATTCGAACTGAACTTAACCAACCAGGAAATCTTCTCGGTAGTGACCAAGCCTACAACGTCA
TTGTCACAGCCCATGCTTTCATCATAATCTTCTTTATAGTCATACCCATCATAATCGGAGGATTCGGAAA
CTGATTAATTCCCCTAATAATTGGAGCCCCAGACATAGCATTCCCACGTCTAAATAACATAAGCTTCTGA
CTCCTACCCCCATCACTACTCCTCATGCTCGCCTCATCCATAATTGAAGCTGGAGCTGGAACAGGTTGAA
CAGTTTACCCTCCCCTATCAGGCAACCTAGCCCATGCTGGCGCATCCGTAGATCTAGCTATCTTCTCACT
ACACCTAGCAGGAGCATCCTCCATCCTAGGGGCCCTCAACTTCATCACCACTGTAATCAACATAAAAACT
CCCAATATAGATTTCCTTGATATACCATTATTCGTCTGATCCGTATTAATTACAGCTATTTTACTACTCT
TATCCCTTCCAGTACTTGCAGCAGGTATTACTATACTTCTAACAGATCGTAACCTAAACACAACCTTCTT
CGACCCTTCAGGTGGAGGAGACCCAATCCTATATCAACACTTATTCTGGTTCTTTGGTCATCCTGAAGTA
TATATTCTTATTCTCCCTGGCTTCGGTGTAATTTCCCATGTCGTTACTTACTATTCAACAAAAAAAGCAC
CCTTTGGTTATATCGGAATAGTTTGAGCCATAGCATCAATCGGATTCCTAGGTTTTATTGTCTGAGCACA
CCATATATTCACTGTAGGAATAGATGTAGACACACGAGCCTACTTCACATCAGCAACAATAATTATCGCC
ATCCCAACCGGTGTAAAAGTATTCAATTGACTTGCCACCATTCATGGAGGACTAATCAAATGAGAAGCCC
CAATACTATGAGCCCTTGGCTTTATCTTCCTATTCACCATTGGGGGTCTCACTGGAATCGTTCTTGCCAA
TTCATCATTAGATATTGTATTACACGACACCTACTATGTAGTAGCCCACTTCCACTATGTTCTTTCCATA
GGTGCTGTCTTCGCCATCATAGCAGGATTTACCCATTGATTTAGCCTCTTTACAGGGTATCTCCTACATT
CAACATGAACTAAAATCCACTTCGCAACAATATTTATTGGAGTAAACCTAACTTTCTTCCCCCAACATTT
CCTAGGCCTAGCCGGCATACCTCGACGCTACTCCGATTATCCAGATGCTTATACCCTCTGAAACTCCATC
TCATCTATAGGTTCTATAATATCCCTAATCGCAGTTATCATAATAGCATTCATTATCTGAGAAGCCCTTT
CATCAAAACGAAACGCAATCGTAACTCAACAAATATCCACCAACATAGAATGAGTTTACTCTTGCCCTCC
ACCCAACCACACACACATTCAAGTCCCACACTTACTTCGTACAAGAAAGGAAGGAATCGAACCCCCTTAA
ATTGGTTTCAAGCCAACCGCATAACCATTATACTACTTTCTTAAAAGACGTTAGTAAAATATTACATACC
CTTGTCAAGGTTAAATTATAGGTTAAACCCCTTTACGACTTACATGCCCACCCCTAACCAAACAAATTTT
CAAGACGCTGCTTCTCCCCTTATAGAAGAACTTACCTACTTCCATGACCATACACTAATAATTGTACTAA
CAATTAGTTTACTTGTACTATACATCCTTCTTTCAATATTAACCACAAAACTTACACATACAAACACCAC
AAACGCCCAACAAGCTGAAATAATTTGAACTATCCTCCCCGCCATTATTCTCATCACCATCGCACTCCCA
TCATTACAAGTACTCTACCTAATAGACGAAATCAATAACCCCCATCTAACAATCAAAACTATAGGTCACC
AATGATATTGAACCTACGAATATACAGATTACGAAGCACTAGAATTTGACTCATACATAATCCAAACACA
AGACCTTCCCTCAGGTCACCTACGATTACTTGAAGTAGACCATCGAATGGTAACACCCATAGAATCCCAC
ATCCGAATATTAGTCTCAGCCGAAGATGTCCTACACTCATGAGCAATCCCCTCCCTAGGACTAAAAACTG
ACGCTATCCCAGGCCGCCTAAACCAAACAAACTTTATCCTTATACAATCCGGCGTCTTCTATGGTCAATG
TTCAGAAATCTGCGGAGCTAACCACAGCTTCATGCCCATCGTTGTCGAATCCTTACCCATTAATGACTTC
GAACGTTGATCCGCAATAATTCCTTCATTGTCACTAAAGAAGCTTAATGTATACAGCACTAGACTTTTAA
TCTAGAGAAGAGTATAAACACTCCTTAGTGATATACCACAATTAAACCCCTACCCATGATTTTCCACCTT
CCTTACCTCTTGATTAATCCTTATCATTCTACTCCTAAAAATCAAATCCCATGTATCAAACAACCCACCA
ACAAATAAAAAAAATACTCTCACAACCCCATCCCCATGAATCTGACCATGAACTTAACCTTATTCGACCA
ATTCTCATCCCCAAGCACCTTAGGTATCCCACTAATCACAATAGCCCTACTCTTACCCACACTTATTTTC
CCTACAAAAACCAATCGATGACTCACAAACCGCCTAGTAACCATTCAATCAAAAACAATTTATATTTTTA
CAAAACAACTCATACTACCAATTCCCCAACCTGGCCATCGATGATCCCTAATCTTAACATCACTAGTAAC
CCTTCTCTTAACTTCTAACCTACTTGGATTGTTACCTTACACCTTCACCCCTACCACACAACTCTCCATA
AACTTAGGATTTGCTTTCCCTATATGATTAGCCACATTATTAATTGGCCTCCGAAACCAACCAACCACAT
CACTCGCACACCTACTACCAGAAGGAACTCCAACTCTACTAATCCCAACACTTATCCTTATTGAATCCAT
CAGCCTAGTAATCCGTCCTTTAGCATTAGGAATCCGAATCTCAGCTAATCTAACAGCCGGCCACCTATTA
ATACAACTCACTGCCTCCGCCACATTATTACTAACCACCACAATACCTGCCCTATCCCTCATAACCATAA
TCCTACTATTTTTACTTACTCTTCTAGAAACAGCAGTAGCCATGATCCAAGCCCTAGTATTTGTACTCCT
CCTAAGCCTCTACCTACAAGAAAATACCCATAACTAAACAACTTCACCCCTTCCATATAACCAACCCTAG
CCCATGACCCCTTACAGGTGCAACAGCAGCACTCCTAATAACTTCTGGATTAACCATATGATTCCACTAC
AACAATAGCCAACTCCTCATACTCGGCCCATTAGTCATACTATTAACCCTCACCCAATGATGACGAGATG
TTGTACGAGAAAGCACATTCCAAGGTCATCACACACCCTCAGTCCAAAATAACCTACGCTATGGTATAAT
TCTATTTATCATCTCCGAAATCTTCTTCTTTATAGGATTCTTCTGAGCTTTCTACCACTCAAGCTTATCC
CCAACAACAGAACTAGGAAACATTTGACCCCCAACAGGAATCACACCCCTTAACCCCTTTGAAGTCCCAT
TGCTAAATACTGCTGTACTCCTTGCTTCAGGAGTAACTATCACTTGAGCTCACCACAGCCTAATAGAAGG
AAACCGAACACACACCCTACAAGCACTTACCCTGACCATCATACTAGGCCTTTACTTCACCATTCTACAA
ATAATCGAATATTTCGAAGCTTCTTTCACAATCGCCGATGGCATTTATGGCTCCACGTTCTTCGTAGCTA
CAGGCTTTCATGGTTTACATGTCATCATTGGTTCAACATTCCTAATTATTTGCCTCATACGCCAACTTAA
GTACCACTTCACCTCACACCACCATTTCGGATTTGAAGCAGCTGCATGATACTGACATTTTGTAGACGTC
ATTTGATTATTCCTCTACCTATCCATCTACTGATGAGGCTCCTATTCTTCTAGTATATTAGTACAAGTGA
CCTCCAATCACTTAGTTTCAGACCCCTCTGAAGAAGAATATTTTAATAACCTAACTAAAACTTTTCTACT
CACCTCTACACTCTCAATTATCCTAACAATTTTAAATTCCCTAATTGCCCAAAAAAACCCAACCCAAGAA
AAACTATCCCCCTACGAATGTGGATTCAACCCCCTTAGAACCAGCTTGATTACCATTCTCAGTTCGATTC
TTCCTTGTTGCAATCCTATTTCTCCTTTTCGACCTCGAAATCGCACTCCTCCTCCCACTACCATGAGCTA
CCCAACTCCCATCACCAACAATAACCTTAATCTGAACTACCACCCTCCTTACACTCCTTACCGCAGGATT
CATCTACGAATGAATCCAAGGAGGACTAGAATGACCAGACTGGGTATCTAGTCCAAAACAAGACCACTAA
TTTCGGCTTAGTAAATCATGTATATAACCATGGCTACCTTGTATACCACACTATCATCTAATTCTCCTTA
TTGGTTTTCTTATCAGCCTTGTAGGATTTACCTGCCACCAAAAACACCTAATCTCAACCCTACTAGCTCT
TAGAAGGTATAACACTCACTATATTTATCGCAATCTCAATAGAAGCCCTCCAACTACAAACGGCGCCCCT
TATGCTATCTGCAATCCTAATACTCACATTCTCCGCTTGCGACACCAGTGTCGGCCTCTCATTATTAGTA
GCTGCATCACGAACACATGGGCTTAGATATATTAAAAAACCTGAATCTACTCCAATGTTAAAATTATTAT
TACCTACAATCATACTGCTACCTACTACTTGACTTTGTAAAAAAAACCACCTCTCACATACAACTCTCCT
ATTCAGCTTTACCATTGCATTTCTTAGTCTACAATGATTCAAACCCAAATTTGAATTAACAAACACTTTC
TCTAATATCTACATAGGAGTAGACCCACTCTCAACTCCATTACTCATCCTAACCTCCTGAATAACCCCAC
TAATAATTCTCGCCAGCAAAAACCACTTAACCCCAGAACCACTTTCGCGCAAACGAACCTTTACCACAAT
AATCATCTCCCTACAAATTTTCCTAACCTTAGCATTCTCAGCTTCAGAAATAATATTATTTTTTACAATA
TTCGAAGCAACCCTAATCCCAACCTTAATTATCATCACACGGTGAGGGAACCAAATAGAACGATTAAATG
CTGGTACTTACTTCTTATTCTACACCCTAATCGGTTCCCTCCCACTTCTAATTGCTCTCACCTCATTATA
TACTCATCATAACACACTCTCCCTCTTTATCTTACAGCTAAACCCTCCCCACCTCACAAACTCCTGAGCC
CATACAATATGGTGACTCGCCCTACTAACAGCATTCATAATTAAAATACCACTCTATGGTCTACACCTAT
GACTCCCAAAAGCACACGTAGAGGCCCCTATCGCAGGTTCTATGATCTTAGCTGGAGTCTTACTAAAACT
AGGAGGATATGGTATCATCCGAATAACCTTAATACTTAACCCAGTAACAAAAACACTTAGCTACCCCTTC
ATAGCCCTCTCTTTATGAGGCATTATTATAACAGGCCTAATCTGCCTACGACAAACAGACCTAAAATCAC
TAATTGCCTATTCCTCAGTAGGCCACATAGGTCTAGTAATTTCTGCAGCACTCCTACAAACACCTCTATC
AATTACAGGAGCCACCATTCTAATAATTGCCCACGGCTTATCATCATCCATACTCTTCTGTTTAGCTAAT
ACAAACTACGAACGAACCCATAACCGAACCCTTCTATTAACGCGTAGCATACAAACCCTACTACCCCTAA
TAACCCTCTGATGATTATTAGCTAACTTAATAAATATAGCCCTTCCCCCCACAATTAACCTTATAGGAGA
ACTGACAATCATTGCATCCTTATTCAACTGAGCCAATATTACTATTCTATTAACTGGACTAGGCACACTA
ATCTCAGCCCTCTACTCTCTTCACATGTTCTCATCTACACAGTGAGGGGGAACTCCCCCACCCCACATAC
ACACTATCACCCCTTCCCACACACGAGAGCACCTAATCATAACACTCCATATTATCCCTTTAATCCTACT
AATAGTAAAACCCCAACTTATAACCATCTCGTTAGTATAGTTTCAACAAACATTAGAATGTGAGCCTAAA
ATTAGAGGTGTAAACCCTCTTACTAACCGAGGAAGAAAACAAGAAACCGCTAACTTCTAACCCTGAGACT
ACACCCCCCAGCTTCCCCACTTTCAAAGGACAGAAGTAATCCTGTGGCTTTAGGAGCCATTTCCCCTTGG
TGCAACTCCAAGTGAAAGTAACATGCCAAACCTTCAACTCATCCTAAAAACAATTCTCATTTCCGAATTG
CTAATCCTAGCACTATCAGCACTTACAACAATACTTCCTCCCCTACTCAAAAAACTTACTTGAGACCCAG
AAAAAGCCATAACCACAACACTCCGACTATCCTTAATCTCCATTCTCATCCATATCTTAATTGAAGAGCC
TGCCTCAATCTCATCTCTTTATTCACCAACAATGCTAAACCTAAGTATAACCATTAAAATTGACTATTAT
TCCCTAATTTTCACTTCCATTGCTCTCTTCATCACTCGAGCCATCCTACAATACACAAAGTGATACATAG
CATCAGATCGAGACCTACAAAAATTCTCCATATTCCTTCTCCTCTTCTTAATATCAATAATCATATTTAT
CACCGCCAACAACTTCTTCCCTATATTAGTTGGCTGAGAAACCATAGGACTAATATCCTACCTCCTTATC
TCTTGATGGCACGGACGAGCAGAAGCTACCACATCCGGCCTTAAAGCCATCTTATACAATCGACTTGCTG
ACATTGGACTTATCCTCACCTTTACCTGATGTCTCACTTACATATCCTCCCTTGACCTAGATACATTCTT
TGCCTCAGCTACACTCGTAACAGGAGTCCCAATCCTAGGAATACTAATAGCAGCCATAGGAAAATCAGCC
CAATTTGGTATACACCCATGACTTCCTGCCGCCATAGAAGGCCCCACACCCGTCTCAGCCCTACTACACT
CTAGCACAATAGTAACTGCTGGAATTTATCTATTAATTCGAATACATCCTATTCTATCACAAATTAAAGG
TTTTAACTTAGCCTGCCTAACCTTAGGAGCTGCCACCGCCCTATACGCCTCACTTATAGCCCTAACACAA
AATGACCTCAAAAAAATTATTGCCTACTCCACACTCAGCCAATTAGGATTTATAATAGCTACTGTAGGAC
TTAATTTCCCAGACGTAGCCTTTATACACCTCTGCATACACGCTTTCTTCAAAGCAATAATATTCCTATG
CGCAGGCTCCATCTCCCATACTTTATTTGGAGAACAAGACATCCGAAAAATAGGAGGTATAATCAAAGTA
ATCCCTATCACAGCCTCCTGTTTTACCCTCTCCACCCTAGCCCTTGCCGGCTTCCCATTCCTAACAGGAT
TCTTCTCAAAAGACCTCATCATCGAAATAATCCTCTTATCAAAAACCAATACACTCTGAGCAACCATATT
ACTCACCTCAGCCATATTCACCGCAATCTATAGCCTACGAATAACACTCCGAATCCTTACAGGCACTCCA
TGTTACAACAACCTATTAATGTATAAAGAAAATCCTACATGCACCAAACCAATTATAAAACTAGCATTAG
CAAGTATTATTACAGGATCCCTATTCTCATTATTCACTCCACCAATTTGCCTTCCACTACAAACTCTCCC
CCCCACTATCAAACTTGCAGCACTAACCATTACCTTTATAAGCGCATTCTCCGCAATATACTTGATTTCC
CTAGCCAATAGTAAACCCCTACCCAAAAATACTATCCAAGACCACGTACTTCAAACAGCAAAAGACCTAG
ACATCCTTACCCACCGCTACTTAATAACAAAACTCCTAAAAGGAGGTAATAAAACAGCCCTCCAAATCCT
AGACAATTATTGAAAACTCAAAGCAGGACCAAAATACATCGAAAAAACTCAAATCCCCATGTCTATAAAA
ACATCCACCCAAAGTGGTCTCATCAAAAACTACTTTATAGCCTTCTTAGTTGCTTTCGTAGTTATCTTGT
ATATCATACTTTTCTACTAATGACCCCCCCCAAATTTCTAAAGGCACTTATCCAATGGTTACACTTAACC
ATTAAAGTAGATCACTTCTACCAGAAATTAAGGGTCATAAAAACGCCTGTGCCCCTCCCCTTTTACTAAA
CCCAAAAACCCCTTAAATAGCCCGACAAGCCACCCGAAACAACCCTTGCACCAGCACTAAAACAACAAAA
AAAGTCAAGAATAGCCCAAATGCAGCCACCAATAACACCCAACCCCCTATCCCATATAATAAAGACAAAC
CCAAAGTTTCAATCCGAGCAACAGATAGCGCCTCAATATCCCCCACCTCCCCTCACCAACCTCCACTATA
CAACGTAACAACTACCCCTAACACAATATACCCGCCAAACCACAGCCCTCCCATTACATCCTCCACCACT
GCAGGAAAAGGCTCCATCACCAACGTAACAGAGTAAGCAAAAATAACCAACATTCCTCCAAGATAAACCA
AAAACAACATCAAAGCCAAAAAAGAACTTCCCTTTCAAGCCAATATTCCACACCCCGTCGCCGCCGCACA
TACCAAACTCACCACCCCGTAGTAAACTGAAACATTTGAAGACACCCCAATCAATCAAAACACATAACTA
ACCCCCAATAGCATAGAAACGTATATCATAGTACTTGTCCGGATTCTAACCAAAACCTTTGGTATGAAAA
ACCAACGTTGCATTCAACCACAAGTACATTGCACCTAAAACACAACCCACTCCTAAAACTCATCAATAAA
TCTCTTATCAACCTCCCAAGCCCCTCCAACATCTCTGCCTGATGAAACTTTGGCTCCCTACTAAGCATAT
GCTTAATCCTACAAATTTCCACAGGCATCTTTTTAGCAATACACTACACACCAAACATCACCATCGCCTT
CTCATCAGTTACCCATATTGCTCGAGACGTCCAATACGGCTGACTCCTCCGAAATTTACACGCTAACGGA
GCCTCTCTTTTCTTCATCTGCCTCTACCTCCACGTTGGACGAGGTATTTACTACGGGTCGTACCTTAATA
AAAAAACTTGATACACGGGTGTCATCCTCCTACTCCTAACAATAGCCACAGCCTTTATAGGGTACATTTT
ACCCTGAGGCCAAATATCCTTTTGAGGTGCCACAGTAATCACTAATCTCCTATCTGCCACCCCCTATGTA
GGACCCACCTTAGTCCAATGAATCTGAGGAGGATTCTCAGTGGACAACGCAACCCTAACTCGCTTCTTTA
CTCTACACTTCCTGACCCCTTTTATCATTGCCGGCTTCTCTCTAATTCACCTCTTATTCCTCCACGAAAC
AGGCTCCAACAACCCCACAGGGCTCAACTCCAACTCCGACAAAATCCCATTTCACCCCTACTTCTCATAC
AAAGACCTTCTAGGCATAAATTTACTCATCATTGGACTAACTATCCTAACCCTCCTCCTCCCTAACCTTT
TAACAGACCCTGAAAACTTCACACCTGCCAACCCCCTAATCACCCCTCCACATATCAAACCTGAATGGTA
CTTCCTATTTGCTTACGCAATCCTACGCTCCATCCCAAACAAACTGGGAGGAGTATTAGCCCTCCTAGCC
TCGGTAACCATCCTTTTTCTCATACCCACCTTACACACCTCCAAACAACGCTCAACCACCTTCCGACCCT
TAACCCAAATTCTACTCTGATCTCTAGCCGCCGACCTAATCATTCTCACCTGAATTGGAGCTCAACCCGT
AGAGGACCCATTCATCATCATTGGACAAGTAGCCTCCACCCTCTACTTTACCTTAATCCTTCTTATAGCT
CCCCTAATAGCCCACTTTGAAAACAAACTCCTGAATTACTAAAAATTTCAGTAGTTTACCCTAAAACCTT
GGCCTTGTAAACCAAAAACGGCAAGTCAAACTGCCCTGAAATCAAAAAAAGGGGAATATACTCCCCTGTC
GCCAACTCCCAAAGCTGGTATTTTTACTAAACTATTTTTTGCCCTAAAAAGCATGGAAACCCCCCTACAT
TGCCCTCCCCCCCTCCAGTTATCCCCCCCTACCCCCCCGGAGGGGTTTTTGGCTATGTACATCGTGCATT
CATCTTTTTGCCTCATGCATATATTGTAATACTACTTATTCTTGGTCGTGCATACCTATGCTTTATCGTA
CCCATATGCCCTCCCTCATGCATATCATCAATTACATTCACTTTCATGGTCTCCGGACATAACCTTCGAT
ATTTCACTCCCCCATGACTATTGCCACAGTATTAGGTTATTTCTTGTTTCAGCTACTCCCGTGAACCCGA
CATCCCCTGCTTAGTAGGCATACCGCCCCCAGCTTCTACGTCCATTCCTCTAATTCGTACCTCTTATGAT
CTTCAAAATGCCACTGGCTGATACTTCTGGAACCCACATCTAAGACGGACATACATTGCTCTTCAGGATG
CCTCTCGTTGCACTTTTAGTCAGTAAGTTCTATACACACGTTCAATAACAAGACATCATTCACTCCCAGG
CATATAGCAATTTTATTTATTTTCTCACTTTCACAGCCCCATAAAGCATGGTATCCCCCGACCCCCTGAA
ACTGGACCTTAGGCTAGTGGTTTACCGGGCAAGCCTCTGGTTTGGGGCTAATTAATTCATGCTTGTCGGA
CATAGCATTTCCACATAAAAATCAAGAGAAAAATTTCCATGACTTTTTTTCATTATTCATTAACATCATT
ACATAATACATATACACATTATACAAACAAAAAGTCCTAATTTTACTAATCTTTATATATATATATACAT
ATACTTTTTAGATAAAAAGGTCCTAATTTTACTAATCTTTATATATATATATACATATACTTTTTAGATA
AAAAGGTCCTAATTTTACTAATCTTTATATATATATATACATATACTTTTTAGATAAAAAGGTCCTAATT
TTACTAATCTTTATATATATATATATACACATACTTTTTAAATAAAAAACCTAATTTATACCAATTTTAT
ATATATACATATACTTTTTAGATAAAAAGGTCCTAATTTTACTAATCTTTATATATATATATATACACAT
ACTTTTTAAATAAAAAACCTAATTTATACCAATTTTATATATATACATATACTTTTTAGATAAAAAGGTC
CTAATTTTACTAATCTATAAAAGGTATTTAC


Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.