Viewing data for Cyprinella spiloptera
| Scientific name | Cyprinella spiloptera |
| Common name | Spotfin shiner |
| Maximum lifespan | 5.00 years (Cyprinella spiloptera@AnAge) |
| Total mtDNA (size: 16545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7649 | 8893 | 4483 | 3166 | 4466 | 4427 |
| Base content per 1 kb (bases) | 462 | 538 | 271 | 191 | 270 | 268 |
| Base content (%) | 46.2% | 53.8% | ||||
| Total protein-coding genes (size: 11397 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5306 | 6091 | 3229 | 2077 | 3242 | 2849 |
| Base content per 1 kb (bases) | 466 | 534 | 283 | 182 | 284 | 250 |
| Base content (%) | 46.6% | 53.4% | ||||
D-loop:
No data available for this section.
| Total tRNA-coding genes (size: 1561 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 726 | 835 | 390 | 336 | 385 | 450 |
| Base content per 1 kb (bases) | 465 | 535 | 250 | 215 | 247 | 288 |
| Base content (%) | 46.5% | 53.5% | ||||
| Total rRNA-coding genes (size: 2637 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1253 | 1384 | 654 | 599 | 538 | 846 |
| Base content per 1 kb (bases) | 475 | 525 | 248 | 227 | 204 | 321 |
| Base content (%) | 47.5% | 52.5% | ||||
| 12S rRNA gene (size: 956 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 489 | 467 | 256 | 233 | 185 | 282 |
| Base content per 1 kb (bases) | 512 | 488 | 268 | 244 | 194 | 295 |
| Base content (%) | 51.2% | 48.8% | ||||
| 16S rRNA gene (size: 1681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 764 | 917 | 398 | 366 | 353 | 564 |
| Base content per 1 kb (bases) | 454 | 546 | 237 | 218 | 210 | 336 |
| Base content (%) | 45.4% | 54.6% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 297 | 387 | 192 | 105 | 212 | 175 |
| Base content per 1 kb (bases) | 434 | 566 | 281 | 154 | 310 | 256 |
| Base content (%) | 43.4% | 56.6% | ||||
| ATP8 (size: 165 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 67 | 98 | 46 | 21 | 44 | 54 |
| Base content per 1 kb (bases) | 406 | 594 | 279 | 127 | 267 | 327 |
| Base content (%) | 40.6% | 59.4% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 689 | 862 | 383 | 306 | 486 | 376 |
| Base content per 1 kb (bases) | 444 | 556 | 247 | 197 | 313 | 242 |
| Base content (%) | 44.4% | 55.6% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 305 | 386 | 180 | 125 | 186 | 200 |
| Base content per 1 kb (bases) | 441 | 559 | 260 | 181 | 269 | 289 |
| Base content (%) | 44.1% | 55.9% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 367 | 417 | 207 | 160 | 229 | 188 |
| Base content per 1 kb (bases) | 468 | 532 | 264 | 204 | 292 | 240 |
| Base content (%) | 46.8% | 53.2% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 550 | 591 | 335 | 215 | 325 | 266 |
| Base content per 1 kb (bases) | 482 | 518 | 294 | 188 | 285 | 233 |
| Base content (%) | 48.2% | 51.8% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 482 | 493 | 293 | 189 | 281 | 212 |
| Base content per 1 kb (bases) | 494 | 506 | 301 | 194 | 288 | 217 |
| Base content (%) | 49.4% | 50.6% | ||||
| ND2 (size: 1047 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 520 | 527 | 325 | 195 | 280 | 247 |
| Base content per 1 kb (bases) | 497 | 503 | 310 | 186 | 267 | 236 |
| Base content (%) | 49.7% | 50.3% | ||||
| ND3 (size: 351 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 157 | 194 | 94 | 63 | 107 | 87 |
| Base content per 1 kb (bases) | 447 | 553 | 268 | 179 | 305 | 248 |
| Base content (%) | 44.7% | 55.3% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 637 | 744 | 389 | 248 | 414 | 330 |
| Base content per 1 kb (bases) | 461 | 539 | 282 | 180 | 300 | 239 |
| Base content (%) | 46.1% | 53.9% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 142 | 155 | 92 | 50 | 83 | 72 |
| Base content per 1 kb (bases) | 478 | 522 | 310 | 168 | 279 | 242 |
| Base content (%) | 47.8% | 52.2% | ||||
| ND5 (size: 1827 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 844 | 983 | 531 | 313 | 502 | 481 |
| Base content per 1 kb (bases) | 462 | 538 | 291 | 171 | 275 | 263 |
| Base content (%) | 46.2% | 53.8% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 252 | 270 | 163 | 89 | 99 | 171 |
| Base content per 1 kb (bases) | 483 | 517 | 312 | 170 | 190 | 328 |
| Base content (%) | 48.3% | 51.7% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.41%) 
Alanine (Ala, A)
n = 21 (9.25%) 
Serine (Ser, S)
n = 9 (3.96%) 
Threonine (Thr, T)
n = 22 (9.69%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 13 (5.73%) 
Leucine (Leu, L)
n = 49 (21.59%) 
Isoleucine (Ile, I)
n = 19 (8.37%) 
Methionine (Met, M)
n = 13 (5.73%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 14 (6.17%) 
Tyrosine (Tyr, Y)
n = 4 (1.76%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 8 (3.52%) 
Glutamine (Gln, Q)
n = 8 (3.52%) 
Histidine (His, H)
n = 3 (1.32%) 
Lysine (Lys, K)
n = 1 (0.44%) 
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 10 | 8 | 11 | 7 | 14 | 5 | 10 | 2 | 6 | 6 | 3 | 4 | 0 | 8 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 0 | 3 | 10 | 8 | 0 | 1 | 1 | 4 | 4 | 8 | 2 | 6 | 1 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 9 | 2 | 2 | 0 | 2 | 0 | 1 | 4 | 1 | 3 | 3 | 2 | 5 | 3 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 49 | 71 | 68 | 40 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 64 | 30 | 108 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 30 | 57 | 77 | 64 | ||||||||||||
| ATP8 (size: 165 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPSPWFAVLVFSWFIFLTIIPTKVLNHLTPNEPAPMSEEKHKADSWNWPW* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (5.56%)
Serine (Ser, S)
n = 4 (7.41%)
Threonine (Thr, T)
n = 3 (5.56%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 3 (5.56%)
Leucine (Leu, L)
n = 5 (9.26%)
Isoleucine (Ile, I)
n = 3 (5.56%)
Methionine (Met, M)
n = 2 (3.7%)
Proline (Pro, P)
n = 8 (14.81%)
Phenylalanine (Phe, F)
n = 4 (7.41%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.26%)
Aspartic acid (Asp, D)
n = 1 (1.85%)
Glutamic acid (Glu, E)
n = 3 (5.56%)
Asparagine (Asn, N)
n = 4 (7.41%)
Glutamine (Gln, Q)
n = 1 (1.85%)
Histidine (His, H)
n = 2 (3.7%)
Lysine (Lys, K)
n = 3 (5.56%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 1 | 1 | 0 | 2 | 1 | 0 | 2 | 1 | 0 | 2 | 0 | 1 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 2 | 2 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 3 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 10 | 14 | 17 | 14 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 7 | 16 | 15 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 16 | 22 | 13 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 45 (8.72%)
Alanine (Ala, A)
n = 49 (9.5%)
Serine (Ser, S)
n = 30 (5.81%)
Threonine (Thr, T)
n = 34 (6.59%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 46 (8.91%)
Leucine (Leu, L)
n = 63 (12.21%)
Isoleucine (Ile, I)
n = 36 (6.98%)
Methionine (Met, M)
n = 23 (4.46%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 11 (2.13%)
Asparagine (Asn, N)
n = 16 (3.1%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 18 (3.49%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 29 | 7 | 9 | 18 | 11 | 17 | 5 | 10 | 6 | 2 | 12 | 8 | 18 | 8 | 23 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 14 | 0 | 1 | 14 | 17 | 10 | 8 | 9 | 10 | 15 | 11 | 9 | 3 | 12 | 4 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 15 | 2 | 5 | 5 | 15 | 1 | 1 | 3 | 7 | 11 | 1 | 2 | 7 | 9 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 8 | 3 | 9 | 6 | 5 | 3 | 1 | 3 | 3 | 1 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 166 | 113 | 121 | 117 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 137 | 95 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 65 | 133 | 160 | 159 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 16 (6.99%)
Serine (Ser, S)
n = 16 (6.99%)
Threonine (Thr, T)
n = 12 (5.24%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 22 (9.61%)
Leucine (Leu, L)
n = 27 (11.79%)
Isoleucine (Ile, I)
n = 16 (6.99%)
Methionine (Met, M)
n = 13 (5.68%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 9 (3.93%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 14 (6.11%)
Glutamic acid (Glu, E)
n = 14 (6.11%)
Asparagine (Asn, N)
n = 4 (1.75%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 4 | 9 | 6 | 3 | 10 | 2 | 5 | 7 | 1 | 4 | 7 | 10 | 1 | 6 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 2 | 3 | 7 | 6 | 0 | 2 | 1 | 5 | 1 | 2 | 5 | 6 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 5 | 2 | 3 | 5 | 3 | 1 | 0 | 4 | 4 | 5 | 1 | 1 | 2 | 2 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 9 | 5 | 4 | 10 | 2 | 2 | 1 | 0 | 3 | 2 | 0 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 59 | 53 | 43 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 54 | 63 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 67 | 84 | 55 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (8.46%)
Alanine (Ala, A)
n = 23 (8.85%)
Serine (Ser, S)
n = 13 (5.0%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 18 (6.92%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.85%)
Asparagine (Asn, N)
n = 1 (0.38%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 6 | 4 | 7 | 3 | 5 | 7 | 9 | 8 | 1 | 4 | 4 | 7 | 3 | 10 | 14 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 1 | 2 | 13 | 5 | 3 | 2 | 7 | 6 | 7 | 5 | 2 | 4 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 10 | 4 | 4 | 1 | 5 | 0 | 0 | 3 | 6 | 5 | 1 | 1 | 1 | 0 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 6 | 4 | 3 | 2 | 2 | 0 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 64 | 50 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 66 | 54 | 97 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 38 | 77 | 84 | 62 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (7.12%)
Alanine (Ala, A)
n = 30 (7.92%)
Serine (Ser, S)
n = 23 (6.07%)
Threonine (Thr, T)
n = 26 (6.86%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 26 (6.86%)
Leucine (Leu, L)
n = 63 (16.62%)
Isoleucine (Ile, I)
n = 26 (6.86%)
Methionine (Met, M)
n = 11 (2.9%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 16 (4.22%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 13 | 9 | 11 | 10 | 16 | 14 | 8 | 4 | 3 | 5 | 8 | 7 | 6 | 7 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 2 | 3 | 12 | 11 | 4 | 4 | 9 | 10 | 4 | 6 | 4 | 7 | 4 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 3 | 6 | 5 | 8 | 5 | 3 | 0 | 2 | 7 | 8 | 4 | 4 | 7 | 9 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 2 | 4 | 3 | 7 | 4 | 5 | 0 | 0 | 7 | 1 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 99 | 99 | 90 | 92 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 98 | 75 | 155 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 64 | 138 | 101 | 77 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (5.86%)
Alanine (Ala, A)
n = 34 (10.49%)
Serine (Ser, S)
n = 22 (6.79%)
Threonine (Thr, T)
n = 18 (5.56%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 27 (8.33%)
Leucine (Leu, L)
n = 61 (18.83%)
Isoleucine (Ile, I)
n = 20 (6.17%)
Methionine (Met, M)
n = 9 (2.78%)
Proline (Pro, P)
n = 24 (7.41%)
Phenylalanine (Phe, F)
n = 18 (5.56%)
Tyrosine (Tyr, Y)
n = 13 (4.01%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 10 (3.09%)
Glutamine (Gln, Q)
n = 7 (2.16%)
Histidine (His, H)
n = 4 (1.23%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 15 | 4 | 15 | 13 | 17 | 6 | 6 | 4 | 3 | 12 | 4 | 5 | 6 | 9 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 0 | 3 | 17 | 10 | 4 | 4 | 4 | 5 | 6 | 8 | 8 | 6 | 2 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 7 | 0 | 7 | 2 | 8 | 2 | 1 | 2 | 6 | 7 | 3 | 4 | 5 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 3 | 8 | 0 | 4 | 3 | 4 | 0 | 1 | 5 | 2 | 0 | 0 | 0 | 1 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 95 | 94 | 67 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 95 | 57 | 135 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 56 | 104 | 88 | 77 | ||||||||||||
| ND2 (size: 1047 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (5.46%)
Alanine (Ala, A)
n = 39 (11.21%)
Serine (Ser, S)
n = 22 (6.32%)
Threonine (Thr, T)
n = 45 (12.93%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 17 (4.89%)
Leucine (Leu, L)
n = 67 (19.25%)
Isoleucine (Ile, I)
n = 23 (6.61%)
Methionine (Met, M)
n = 15 (4.31%)
Proline (Pro, P)
n = 20 (5.75%)
Phenylalanine (Phe, F)
n = 11 (3.16%)
Tyrosine (Tyr, Y)
n = 7 (2.01%)
Tryptophan (Trp, W)
n = 11 (3.16%)
Aspartic acid (Asp, D)
n = 4 (1.15%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 7 (2.01%)
Glutamine (Gln, Q)
n = 14 (4.02%)
Histidine (His, H)
n = 9 (2.59%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 7 | 8 | 17 | 15 | 12 | 5 | 9 | 6 | 8 | 4 | 3 | 9 | 1 | 4 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 0 | 1 | 8 | 14 | 9 | 8 | 2 | 5 | 4 | 8 | 6 | 10 | 3 | 1 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 10 | 9 | 2 | 9 | 5 | 1 | 0 | 5 | 4 | 3 | 5 | 9 | 4 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 3 | 1 | 1 | 3 | 2 | 7 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 6 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 83 | 96 | 104 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 121 | 55 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 72 | 108 | 88 | 81 | ||||||||||||
| ND3 (size: 1047 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (5.46%)
Alanine (Ala, A)
n = 39 (11.21%)
Serine (Ser, S)
n = 22 (6.32%)
Threonine (Thr, T)
n = 45 (12.93%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 17 (4.89%)
Leucine (Leu, L)
n = 67 (19.25%)
Isoleucine (Ile, I)
n = 23 (6.61%)
Methionine (Met, M)
n = 15 (4.31%)
Proline (Pro, P)
n = 20 (5.75%)
Phenylalanine (Phe, F)
n = 11 (3.16%)
Tyrosine (Tyr, Y)
n = 7 (2.01%)
Tryptophan (Trp, W)
n = 11 (3.16%)
Aspartic acid (Asp, D)
n = 4 (1.15%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 7 (2.01%)
Glutamine (Gln, Q)
n = 14 (4.02%)
Histidine (His, H)
n = 9 (2.59%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 7 | 8 | 17 | 15 | 12 | 5 | 9 | 6 | 8 | 4 | 3 | 9 | 1 | 4 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 0 | 1 | 8 | 14 | 9 | 8 | 2 | 5 | 4 | 8 | 6 | 10 | 3 | 1 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 10 | 9 | 2 | 9 | 5 | 1 | 0 | 5 | 4 | 3 | 5 | 9 | 4 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 3 | 1 | 1 | 3 | 2 | 7 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 6 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 83 | 96 | 104 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 121 | 55 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 72 | 108 | 88 | 81 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (5.88%)
Alanine (Ala, A)
n = 37 (8.06%)
Serine (Ser, S)
n = 30 (6.54%)
Threonine (Thr, T)
n = 39 (8.5%)
Cysteine (Cys, C)
n = 6 (1.31%)
Valine (Val, V)
n = 27 (5.88%)
Leucine (Leu, L)
n = 86 (18.74%)
Isoleucine (Ile, I)
n = 37 (8.06%)
Methionine (Met, M)
n = 24 (5.23%)
Proline (Pro, P)
n = 28 (6.1%)
Phenylalanine (Phe, F)
n = 19 (4.14%)
Tyrosine (Tyr, Y)
n = 14 (3.05%)
Tryptophan (Trp, W)
n = 20 (4.36%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 7 (1.53%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 14 (3.05%)
Lysine (Lys, K)
n = 9 (1.96%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 16 | 11 | 18 | 18 | 22 | 8 | 15 | 7 | 4 | 5 | 11 | 6 | 5 | 7 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 13 | 4 | 2 | 10 | 10 | 13 | 4 | 6 | 8 | 5 | 8 | 6 | 11 | 7 | 4 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 10 | 7 | 9 | 5 | 7 | 1 | 2 | 6 | 7 | 7 | 6 | 5 | 3 | 4 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 9 | 1 | 1 | 3 | 6 | 3 | 2 | 2 | 5 | 2 | 0 | 0 | 0 | 0 | 14 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 105 | 130 | 124 | 101 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 72 | 126 | 69 | 193 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 71 | 133 | 137 | 119 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 12 (12.24%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 1 (1.02%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 8 (8.16%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (3.06%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 0 | 1 | 3 | 4 | 2 | 9 | 3 | 3 | 2 | 0 | 0 | 0 | 2 | 0 | 4 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 2 | 2 | 5 | 5 | 0 | 0 | 2 | 2 | 1 | 0 | 1 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 4 | 1 | 2 | 3 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 1 | 1 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 1 | 2 | 0 | 1 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 23 | 30 | 23 | 23 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 15 | 30 | 14 | 40 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 32 | 35 | 20 | ||||||||||||
| ND5 (size: 1827 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 32 (5.26%)
Alanine (Ala, A)
n = 56 (9.21%)
Serine (Ser, S)
n = 47 (7.73%)
Threonine (Thr, T)
n = 53 (8.72%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 35 (5.76%)
Leucine (Leu, L)
n = 91 (14.97%)
Isoleucine (Ile, I)
n = 43 (7.07%)
Methionine (Met, M)
n = 34 (5.59%)
Proline (Pro, P)
n = 29 (4.77%)
Phenylalanine (Phe, F)
n = 37 (6.09%)
Tyrosine (Tyr, Y)
n = 15 (2.47%)
Tryptophan (Trp, W)
n = 14 (2.3%)
Aspartic acid (Asp, D)
n = 13 (2.14%)
Glutamic acid (Glu, E)
n = 13 (2.14%)
Asparagine (Asn, N)
n = 27 (4.44%)
Glutamine (Gln, Q)
n = 19 (3.13%)
Histidine (His, H)
n = 12 (1.97%)
Lysine (Lys, K)
n = 21 (3.45%)
Arginine (Arg, R)
n = 11 (1.81%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 15 | 24 | 25 | 23 | 18 | 7 | 15 | 11 | 8 | 8 | 14 | 6 | 7 | 13 | 24 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 1 | 5 | 8 | 21 | 20 | 7 | 4 | 14 | 7 | 7 | 9 | 6 | 10 | 4 | 15 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 14 | 4 | 5 | 14 | 9 | 4 | 2 | 13 | 5 | 10 | 5 | 3 | 11 | 16 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 7 | 6 | 3 | 10 | 12 | 9 | 0 | 2 | 4 | 5 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 149 | 144 | 193 | 123 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 78 | 170 | 121 | 240 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 86 | 217 | 167 | 139 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.45%)
Alanine (Ala, A)
n = 21 (12.14%)
Serine (Ser, S)
n = 13 (7.51%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 2 (1.16%)
Valine (Val, V)
n = 23 (13.29%)
Leucine (Leu, L)
n = 28 (16.18%)
Isoleucine (Ile, I)
n = 4 (2.31%)
Methionine (Met, M)
n = 10 (5.78%)
Proline (Pro, P)
n = 5 (2.89%)
Phenylalanine (Phe, F)
n = 9 (5.2%)
Tyrosine (Tyr, Y)
n = 7 (4.05%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 2 (1.16%)
Glutamic acid (Glu, E)
n = 6 (3.47%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 5 (2.89%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 1 | 7 | 3 | 1 | 7 | 2 | 11 | 0 | 0 | 7 | 2 | 9 | 5 | 4 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 0 | 7 | 4 | 5 | 5 | 5 | 1 | 4 | 15 | 1 | 2 | 1 | 1 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 1 | 1 | 4 | 2 | 3 | 0 | 3 | 1 | 4 | 3 | 3 | 4 | 1 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 5 | 2 | 0 | 1 | 0 | 2 | 0 | 2 | 1 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 77 | 24 | 25 | 48 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 40 | 19 | 74 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 45 | 25 | 55 | 49 | ||||||||||||
| Total protein-coding genes (size: 11416 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 247 (6.49%)
Alanine (Ala, A)
n = 349 (9.18%)
Serine (Ser, S)
n = 245 (6.44%)
Threonine (Thr, T)
n = 298 (7.84%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 265 (6.97%)
Leucine (Leu, L)
n = 619 (16.28%)
Isoleucine (Ile, I)
n = 249 (6.55%)
Methionine (Met, M)
n = 173 (4.55%)
Proline (Pro, P)
n = 216 (5.68%)
Phenylalanine (Phe, F)
n = 233 (6.13%)
Tyrosine (Tyr, Y)
n = 115 (3.02%)
Tryptophan (Trp, W)
n = 120 (3.16%)
Aspartic acid (Asp, D)
n = 78 (2.05%)
Glutamic acid (Glu, E)
n = 101 (2.66%)
Asparagine (Asn, N)
n = 104 (2.73%)
Glutamine (Gln, Q)
n = 97 (2.55%)
Histidine (His, H)
n = 107 (2.81%)
Lysine (Lys, K)
n = 75 (1.97%)
Arginine (Arg, R)
n = 77 (2.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 151 | 98 | 99 | 139 | 112 | 154 | 66 | 111 | 60 | 37 | 72 | 65 | 85 | 43 | 102 | 131 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 74 | 10 | 17 | 64 | 137 | 105 | 43 | 40 | 63 | 69 | 75 | 62 | 57 | 70 | 27 | 69 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 99 | 92 | 38 | 49 | 56 | 67 | 14 | 12 | 47 | 52 | 63 | 32 | 37 | 48 | 56 | 33 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 74 | 58 | 43 | 28 | 50 | 41 | 34 | 8 | 14 | 38 | 17 | 0 | 0 | 6 | 3 | 88 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1040 | 968 | 958 | 838 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 530 | 1049 | 686 | 1539 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 583 | 1139 | 1143 | 939 | ||||||||||||
>NC_008103.1 Cyprinella spiloptera mitochondrion, complete genome GCTGGCGTAGCTTAATTCAAAAGCGTAACACTGAAGATGTTAGGATGGGCCCTAGAAAGCTCCGCATGCA CAAAGGCATGGTCCCGACCTTACCATCAGCTCTTGCCCAACTTACACATGCAAGTCTCCGCAACCCCGTG AGTACGCCCTTAATCCCCTGCCCGGGGACGAGGAGCAGGCATCAGGCACAAATCTTTAGCCCAAGACGCC AGGCCCAGCCACGCCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATAAGTGAAAACTTGACTTAG CCAGGGCTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAGAGGCCTAGTTGATTGAAC AACGGCGTAAAGGGTGGTTAAGGACAGTGATATAATAAAGTCGAATGGCCCTTTGGCTGTCATACGCTTC TAGGAGTCTGAAGCCCACTGTACGAAAGTAGCTTTAACAACATCCACCTGACCCCACGAAAACTGAGAAA CAAACTGGGATTAGATACCCCACTATGCTCAGTCATAAACCAAGACGTCCAACTACAATAGGCGTCCGCC TGGGTACTACGAGCATTAGCTTGAAACCCAAAGGACCTGACGGTGTCTCAGACCCCCCTAGAGGAGCCTG TTCTAGAACCGATAACCCCCGTTGAACCTCACCGCTTCTAGCCATCCCAGCCTATATACCGCCGTCGTCA GCTTACCCTGTGAAGGTAATAGAAGTAAGCAAGATGGGCACAGCCCAGAACGTCAGGTCGAGGTGTAGCG TACGGAGCGGGAAGAAATGGGCTACATTTTCTATGATAGAACACTACGGATGTGCAACATGAAATAGTGC TTGAAGGAGGATTTAGAAGTAAGGAGGAAGCAGAGTGTCCTCTTGAACCCGGCTCTGAGGCGCGTACACA CCGCCCGTCACTCTCCCCTGTCAAAATGCAACCGAGTTACCTAACACCAAAGCTCTGACAAGGGGAGGCA AGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATAAAATTCAGGGCGTGGCTGAGCTAGTTAAG CATCTCACTTACACCGAGAAGACATCCATGCAAATTGGGTCGCCCTGAGCCAACCAGCTAGCTTAATTAC CCAAATAATTTAACAATATTTATAACAGGGACAGAACTTAACCCCACAAATTAAATCATTTTTATACCTT AGTATGGGAGACAGAAAAGGTTCAACTGAGCAATAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAAAT GAAACAACCCATATAAGCACTGAATAACAAAGACTAGACCTTGTACCTTTTGCATCATGATTTAGCCAGT ACCCTCAAGCAAGGAGATCCTTAGTTTGATTCCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATAAC TTAGGGCTAACCCGTCTCTGTGGCAAAAGAGTGGGAGGAGCTCCGGGTAGAAGTGACAGACCTACCGAAC CTGGTGATAGCTGGTTGCCTAAGAGATGGATAGAAGTTCAGCCTCGCACACCCTTAATCGAAAGACACAT TATCAAGAAATTTATGGAAACATACGAGAGTTAGTTAAAGGGGGTACAGCCCCTTTAACAAAGGATACAA CCTTAACAGGAGGATAAAGATCATACTAGATAAAATATACCGTTCTAGTGGGCCTGAAAGCAGCCATCTA AACAGAAAGCGTTAAAGCTCGGACAGAAAGACATTTATTATTTCGATAGAAAATCTTATTCCCCTAATTG TATTAGGCCGACCCATGCCCACATGGGTGAGATTATGCTAGAATGAGTAACAAGAAGACCTCATCTTCTC CCGCCGCAAGTGTAAACCAGATCGGACCCACCACTGGAATTTAACGAGCCCAACCACAGAGGGCATTGTG AATAATAGAAACCTCAAGAAGAACTCACAGCTAAATAGTCGTTAACCCCACACTGGAGCGGCACACTAAG GGAAAGACTAAAAGAGGGGGAAGGAACTCGGCAAACACAAGCCTCGCCTGTTTACCAAAAACATCGCCTC CTGCAACACAAAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATATTGACC GTGCAAAGGTAGCGCAATCACTTGTCTTTTAAATAAAGACCTGTATGAATGGCTAGACGAGGGCTTAACT GTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTCTACAAGACGAGAAG ACCCTTTGGAGCTTAAGGTACAAGATTCAATCACGTCAAGCAACTTACTGAATGAGCCAGAACTTAGTGA TGGTGAAACTTTACCTTCGGTTGGGGCGACCACGGAGGAAAGACAAGCCTCCGAGTGGACTGGGACGAAC CCCTAAAGCCAAGATAAACATCTTTAAGCCGCAGAACATCTGACCAATAATGATCCGGCCCACAAGCCGA TCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGCCCATATCGACGAGGGGGTTT ACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATT AAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCAGTTTCTATCTGTAATGCTACTTTTCC TAGTACGAAAGGATCGGAAAAGAGAGGCCCATACTTGACGCACGCCCCACCCCTAATTCATGAAAACAAA TAAATAAAATAAGGGAGGACCTAAACCCCTACCGCCCAAGATAAGGGCATACTTGGATGGCAGAGCCTGG TAAATTGCATAAGGCCTAAGCCCTTAAAACCAGAGGTTCAAATCCTCTTCCCAGTTTATGCTTGACACCT TAATAGTTCACCTAGTTAATCCACTCGCTTACATTGTCCCCGTTCTGTTAGCCGTGGCATTCTTAACCTT ACTTGAGCGAAAGGTGCTAGGATACATGCAGTTCCGAAAAGGACCTAACGTGGTCGGGCCCTATGGCTTA CTCCAACCTATCGCCGACGGGGTTAAGCTATTTATCAAAGAGCCTGTTCGCCCCTCTACATCATCTCCAT TCTTGTTTCTTGCTACCCCTATCCTTGCACTAACCCTAGCCCTGACCCTTTGAGCCCCCATCCCTATGCC CCACCCGGTGATTAATCTCAACTTGGGTGTTCTGTTCATCTTGGCGCTATCAAGCCTTGCAGTTTACTCT ATCCTTGGTTCAGGGTGAGCATCAAATTCAAAATATGCACTCATCGGGGCCCTGCGGGCGGTTGCCCAAA CAATTTCATATGAAGTAAGCCTCGGACTTATCATTCTTTCGGTAATCATCTTTTCTGGAGGTTATACCCT GCAGACATTTAGTACAGCCCAAGAGGCCGTGTGACTAGTTATCCCAGCCTGACCACTCGCGGCAATGTGG TACATCTCTACTCTTGCGGAAACCAATCGAGCTCCCTTTGACCTAACAGAGGGTGAGTCAGAGCTTGTCT CAGGCTTTAACGTTGAGTATGCAGGGGGCCCTTTCGCCTTATTCTTCCTCGCCGAGTACGCCAATATCCT GCTAATAAACACCCTCTCTGCCGTACTATTTCTAGGAACATCGTACTTTCCTGCCATCCCTGAACTAACT ACAGTTGGGCTCATGATCAAGGCCGCACTTCTATCCGTGATATTCCTATGGGTTCGGGCCTCTTACCCCC GATTCCGATATGACCAGCTCATACACCTTGTATGGAAGAACTTTCTTCCGCTAACCCTAGCCCTCGTATT GTGACACGTCTCCCTCCCAATTGCACTAGCAGGCCTTCCCCCACAACTCTAGTTTAAGAACTGTGCCCGA GTGCCCAGGGACCACTTTGATAGAGTGGCTTACAGGGGTTAAAATCCCCTCAGTTCTTAGAAAGAAGGGA GTCGAACCCATACACAAGAGATCAAAGCGCTTGGTGCTTCCGATACACCACTTTCTACGATGAAGTCAGC TAAATAAGCTTTCGGGCCCATACCCCGAACATGACGGTTAAAATCCCTCCTCCATCAATGAATCCTTATG TTATAGCTACGCTTCTCTCCAGCCTTGGCCTAGGCACCACCCTCACCTTCGCCAGCTCCCACTGATTACT AGCCTGGATGGGACTTGAGATTAATACGTTAGCGATTGTTCCTTTAATGGCACAGCACCACCACCCCCGC GCAGTAGAAGCTGCTACGAAATATTTCCTTATTCAGGCCACGGCGGCCGCCGTGATCCTATTTGCAAGCA CAACTAACGCATGAATTACAGGGCAGTGGGATGTAACTAACATATCAGACCCAATCGCCTCAACGATAGT CCTTGCCGCGCTATCACTTAAAGTTGGACTGGCGCCCATACATTTTTGAATGCCTGAAGTACTGCAGGGG CTAGACTTATTGACAGGGCTAATTCTGTCTACCTGACAAAAGCTCGCCCCATTCACCCTCATTATTCAGA CATTCCAAACGTTCGACCCACTCCTCCTTACAGCCCTTGGTCTTGCATCCACTTTGGTAGGCGGATGGGG AGGGTTGAACCAAACCCAATTACGAAAGGTCTTGGCATATTCCTCGATCGCGCACATAGGTTGAATGGTA ATTATCCTTCAACATGCCCCCCACCTCACTTTTCTCGCGCTACTAACATATATTTTGATAACATCCGCGG CATTCCTCACGCTAAAGCTTTCACATGCCACAAAGATTGGGACCTTAGCAACCACCTGATCCAAGAGCCC CCTTATGACGGCCACTGCTACCCTCGTATTGTTATCCCTCGGGGGCCTACCCCCCCTTACCGGGTTCATC CCGAAGTGGTTAATTCTGCAGGAACTAACGAAGCAAGGGCTCCCCCTTCCTGCAACTGTAATAGCTCTTG CTGCCCTCATCAGCTTGTACTTTTACTTGCGGCTTTGCTACGCGATAACTCTTACCATCTCCCCTAATAC TATTACCTCAACCACCCCTTGGCGAGCTCAGACAAATCAGGTCTCTATTCCCCTAGCCTTGTCCACCGTA ATGGCTCTGGGCCTCTTACCCATTACTCCCACTATTGTAACACTCGTTATTTAGAGGCTTAGGATAGCAT CAGACCGGGAGCCTTCAAAGCTCTAAGCAGAAGTGAAAATCTTCTAGCCCCTGATAAGACCTACGAGAGT TTATCTCGCATCTTCTGAATGCAAATCAAATGTCTTTGTTAAACTAAGGCCTTTCTAGACGGGAAGGCCT CGATCCTACAAACTCTTAGTTAACAGCTAAGCGCTCAAGCCAGCGAGCATCCGTCTACTTTCCCGCCGTT TACCGGGTAAGGCGGGAAAGCCCCGGCAGGCTATTAATCTGCATCTCTGGATTTGCAATCCAACGTGGTT ACTCCACCACGGGGCTTGATAGGGAGAGGATTTAAACCTCTGTCTTCGGGGCTACAACCCGCCGCCTAAA CACTCGGCTACCCTACCTGTGGCAATTACACGCTGATTCTTTTCTACAAATCACAAAGACATTGGTACCC TTTACTTAGTATTTGGTGCCTGAGCTGGGATAGTGGGAACCGCTTTAAGCCTCCTCATTCGCGCTGAATT AAGTCAACCTGGCTCACTTCTAGGCGATGATCAGATCTACAATGTAATTGTTACTGCTCACGCCTTTGTA ATAATTTTCTTTATAGTGATACCAATTCTTATCGGGGGGTTCGGGAACTGACTCGTACCTCTAATGATTG GGGCACCTGATATGGCATTTCCGCGGATGAATAACATAAGCTTCTGACTTCTACCCCCATCATTTCTCTT ATTACTAGCTTCCTCTGGTGTTGAAGCTGGGGCTGGGACTGGATGAACTGTATATCCTCCACTTGCGGGT AATCTTGCTCACGCAGGAGCATCAGTAGATCTCACAATCTTCTCCCTGCACCTGGCGGGTGTGTCCTCAA TTTTGGGAGCAGTTAATTTCATTACTACAATTATCAACATGAAGCCCCCAGCAATCTCCCAATATCAGAC CCCTCTGTTCGTGTGAGCCGTACTTGTGACTGCCGTACTTCTTCTCCTCTCACTGCCCGTACTAGCTGCC GGGATTACTATACTTCTTACAGATCGTAATCTTAACACCACATTCTTTGACCCAGCAGGAGGGGGTGACC CTATTCTATATCAACACTTATTTTGATTCTTCGGCCACCCGGAGGTTTACATTCTTATTTTACCTGGGTT TGGAATTATTTCACACGTTGTAGCCTACTACGCGGGTAAAAAAGAACCATTTGGCTACATGGGAATAGTC TGAGCCATGATGGCCATTGGCCTTCTAGGATTTATTGTCTGAGCCCATCACATGTTTACTGTGGGAATGG ATGTAGATACCCGCGCCTACTTTACGTCTGCGACAATAATTATTGCCATTCCAACTGGTGTTAAGGTCTT TAGCTGACTTGCCACACTCCATGGAGGCTCAATTAAATGAGAAACTCCTCTACTATGAGCCCTAGGGTTT ATCTTCCTATTTACCGTTGGAGGATTAACAGGAATTGTTCTTGCTAACTCTTCACTTGACATTGTTCTCC ACGACACATACTATGTCGTTGCTCACTTCCACTATGTCTTGTCAATGGGAGCTGTCTTCGCTATTATGGC AGCGTTTGTTCACTGATTTCCGCTATTTTCAGGCTACACCCTTAACGATACTTGAACAAAAATTCACTTT GCTGTAATGTTTATTGGTGTAAACCTCACGTTCTTCCCACAACATTTCCTAGGCCTAGCGGGAATGCCAC GACGATACTCGGATTATCCGGACGCCTACGCGCTGTGAAACACAGTGTCATCCATCGGCTCACTCGTCTC ACTAGTAGCGGTAATTATGTTCTTATTTATTTTATGGGAGGCCTTCGCCGCCAAGCGAGAAGTATCTTCA GTAGAACTAACAATAACAAATGTAGAATGACTACATGGCTGCCCTCCACCATATCATACATTCGAGGAAC CAGCATTTGTCCAAGTTCAATCAAACTAACGAGAAAGGGAGGAATTGAACCCCCATGTACTGGTTTCAAG CCAGTCACATAACCACTCTGTCACTTTCTTACAAGACATTAGTAAATATGAATATTACATCACTTTGTCA AGGTGAAATTGCAGGTTAAACTCCTGTATGTCTTAGCTTTCATGGCACACCCCGCCCAACTAGGATTCCA AGACGCAGCATCACCCGTCATAGAGGAGCTCCTTCACTTTCACGACCACGCCCTAATAATTGTATTTCTA ATTAGCACAATAGTACTTTACATTATTGTCGCAATAGTTTCTACTAAACTTACTAATAAGTACATCCTAG ACTCCCAAGAGATCGAGATTGTATGAACAGTCTTACCAGCAGTTATCCTAGTACTAATTGCTCTGCCCTC CCTTCGGATTTTATATCTCATAGATGAAGTTAATGACCCCCACCTAACAATTAAAGCCATAGGACATCAA TGATATTGAAGCTATGAATACACGGACTATGAAGATCTAGGATTTGACTCGTACATGGTCCCTACCCAAG ATCTTACGCCAGGGCAATTTCGACTTCTAGAAACAGACCATCGGATAGTAGTCCCGATAGAATCACCAAT CCGTGTCCTAGTATCCGCTGAGGACGTATTGCACTCCTGAGCTATTCCATCTCTCGGTGTAAAGATAGAT GCAGTACCTGGACGATTAAACCAGACTGCCTTTATTACCTCACGACCAGGTGTATTCTACGGACAATGCT CTGAAATTTGCGGCGCCAACCACAGCTTTATGCCCATTGTGGTCGAAGCCGTTCCATTAGAACATTTCGA AAGCTGGTCCACACTGATGTTAGACGACGCCTCACCAGGAAGCTAATTATTGGACAAAGCGTTGGCCTTT TAAGCCAAAGTTTGGTGCTTACCGACCACCCCTAGTGACATGCCCCAACTCAACCCTAGCCCCTGATTTG CAGTTCTAGTATTTTCATGATTTATTTTCCTCACTATTATCCCGACCAAAGTTTTAAACCACTTAACACC TAATGAGCCGGCCCCAATAAGTGAAGAAAAACATAAAGCCGACTCCTGAAACTGACCATGATAACGAGCT TCTTCGACCAGTTTGCAAGCCCTTACTTCCTAGGTATCCCTCTTATTGCTATTGCAATCGCACTCCCATG GCTATTATTCCCAACCCCTTCATCTCGCTGAATGAATAGCCGACTCACCACTCTTCAGGCATGGTTTATT AACCGTTTTACTAATCAGTTACTAATACCCTTAACCACAGGGGGGCATAAGTGGGCCCTAATATTTGCCT CTTTGATACTATTCCTCATCACTATTAATATGCTGGGGCTGCTACCATATACTTTTACTCCGACAACACA GCTATCATTAAATATAGGACTTGCCATACCACTCTGACTTGCCACAGTTATTATTGGAATGCGAAATCAA CCAACAGTTGCCCTTGGACACCTGCTGCCCGAAGGAACTCCTATTCCTTTGATCCCTGTACTAATTATCA TCGAGACAATTAGTCTATTTATCCGACCATTAGCCCTGGGGGTCCGACTCACAGCCAACTTAACTGCAGG CCACCTTCTTATCCAACTTATCGCCACGGCTGTATTTGTTCTACTACCTATAATGCCTACCGTCGCATTA CTTACAGCTGCCGTTCTCTTCCTCTTAACACTTCTAGAAGTTGCAGTAGCAATAATCCAGGCCTACGTCT TTGTACTACTTTTAAGCTTATACCTACAGGAAAACGTTTAATGGCCCACCAAGCACATGCATATCATATA GTTGATCCTAGCCCATGACCACTAACCGGAGCCGTCGGTGCCTTACTGATAACATCTGGCCTGGCGATCT GGTTTCACTTCCACACCATGACACTAATGACCCTTGGATTAGTTCTCTTACTCCTTACAATGTTCCAATG ATGACGTGATGTTATTCGGGAGGGGACCTTCCAAGGCCACCACACGCCTCCAGTACAAAAAGGGCTGCGA TACGGAATAATCCTGTTTATTACTTCTGAAGTCTTCTTTTTCCTAGGCTTCTTCTGAGCCTTCTATCACT CAAGCCTAGCCCCAACGCCTGAACTGGGAGGATGCTGACCCCCTGCCGGGATCATTACATTAGACCCCTT TGAAGTGCCGCTGCTAAATACAGCCGTATTATTAGCATCTGGGGTAACAGTCACATGAGCCCACCACAGC ATTATGGAGGGTGAGCGAAAACAAGCTATTCAATCTCTTGCACTTACGATTCTGTTAGGGTTCTATTTCA CTGCCCTTCAGGCAATAGAGTATTATGAAGCGCCTTTTACAATCGCGGATGGAGTCTACGGCTCAACATT CTTTGTAGCCACGGGGTTCCATGGGTTACATGTAATTATTGGCTCAACCTTCTTAGCCGTGTGTCTTCTC CGCCAAATCCAATACCACTTTACATCCGAACATCACTTTGGCTTTGAAGCCGCTGCCTGATACTGACATT TTGTTGACGTAGTATGATTGTTCCTTTACGTGTCAATCTATTGATGAGGCTCATATCTTTCTAGTATTAA AGTTAGTACAAATGACTTCCAATCATTCAGTCTTGGTTAAATCCCAAGGAAAGATAATGAACTTAATTAC AACTATTTTAATCATTGCCATAACCCTGTCATCAGTTCTAGCCGTTGTGTCTTTCTGATTACCACAGATA ACCCCAGATGCCGAGAAACTTTCGCCCTATGAATGCGGGTTTGACCCGCTAGGATCAGCCCGACTACCAT TCTCCCTGCGGTTCTTTTTGGTAGCAATCCTATTCCTCCTATTTGACTTAGAAATTGCCCTCCTTCTCCC GTTACCATGAGGTGATCAACTCCACAGCCCAACCGGAACATTCTTTTGAGCTACCACAGTTCTAGTCCTT TTAACCCTTGGGTTAATTTACGAATGAACTCAAGGGGGCTTAGAATGAGCAGAGTAGGGCGCTAGTCTAA ACAAGACCTCTGATTTCGGCTCAGAAAATTGTGGTTCGAGTCCACGGCCCCCTTATGACACCAGTACACT TCAGCTTTACCTCAGCATTTATATTAGGACTTATAGGACTAGCATTCCATCGCACCCATATACTCTCCGC CCTGTTATGCTTAGAAGGGATGATGCTATCCCTGTTTATCGCACTAGCCCTATGAACACTACACTTCGAG TCCACGAGCTTCTCTACTGCCCCCATGCTATTGCTAGCTTTTTCTGCCTGTGAGGCAAGTACAGGCCTTG CACTTCTGGTAGCCACAGCTCGCACCCATGGCACTGACCGCCTACAAAACCTTAATCTCCTACAATGCTA AAAGTTTTAGTCCCCACAATTATATTATTCCCAACAATCTGACTGGCCTCTCCTAAATGATTGTGGACAG TAACCGCTACTCACGCTCTCTTGATTGCCTTTTTCAGCCTAACATGATTTTGCTGAACCTCAGAGGCTGG GTGAACTTCATCCAGCCCCTATTTAGCTACTGACCCCTTATCAACACCCCTCTTAGTTCTAACATGTTGG CTCCTTCCCTTAATACTCTTAGCTAGCCAAAATCACATCAACCTTCACCCTATCGTCCGTCAACGACTTT ACATTACTCTCCTCGCTTCACTGCAGACTTTCCTAATCATGGCCTTCGGTGCCACAGAAATTATTATGTT CTATGTCATATTCGAAGCCACTCTTATCCCCACCCTTGTGATTATTACTCGCTGAGGAAATCAAACCGAA CGCCTGGACGCGGGTACCTATTTCTTATTTTATACACTAGTCGGATCCCTCCCCCTCTTAGTGGCCCTAC TCCTTCTACAACAGTCTACGGGGACTCTATCTCTATTAATTATCCAGTATTCACCCCCAGTATTAGTCGG CTCCTGAAGTCATAAAATCTGATGAGCGGGCTGTCTGATCGCCTTCCTAGTCAAGATGCCGCTCTATGGT GTACATCTCTGGTTGCCTAAAGCACATGTAGAAGCCCCTGTTGCAGGGTCTATGGTTCTAGCAGCAGTCC TACTAAAACTTGGGGGCTATGGTATGATACGGATGATGGTGATGCTGGACCCGCTCTCTAAAGAACTAAT CTACCCATTTATTATTCTAGCACTTTGGGGCATTATCATAACGGGCTCGATTTGTCTGCGGCAGACTGAT CTTAAGTCACTAATCGCTTACTCTTCTGTAAGCCACATAGGCCTTGTAGCAGGAGGGATTTTAGTCCAAA CTCCCTGAGGTTTCACGGGGGCAATTATCCTTATAATTGCCCACGGCCTGGTGTCCTCAATACTGTTCTG CTTGGCGAACACGGCTTACGAACGAACCCATAGCCGAACTATAGTTCTCGCTCGAGGTCTCCAAGTGATT TTCCCATTAACGGCAGTCTGGTGATTCGTCGCAAATCTAGCAAACCTAGCGCTCCCCCCGCTTCCTAACT TAATAGGAGAACTTATAATTATCACGACCCTCTTTAGCTGATCTCCCTGAACCATCGCACTTACCGGATT GGGGACGCTAATCACTGCAGCCTACTCCCTTTACATGTTTTTAATGTCTCAACGTGGCCCAACACCACAT CATATCCTTAGTATTACACCTGTCCACACCCGAGAACACCTACTAATGGCTCTTCACTTTATTCCGCTAA TTCTCCTCATTGCAAAGCCAGAACTTATGTGGGGGTGATGTTACTAGTAAGTATAGTTTAAACAAAACAT CAGATTGTGATTCTGGAGACAGGGGTTAAAGTCCCCTTACTCACCAAGGAAGGACAGAAACCAGTAAGTG CTGCTAATACTTATGCCCCGAGGTTAAAATCCTCGGCTTCTTTACGCCTCTGAAGGATAACAGCTCATCC GTTGGTCTTAGGAACCAAAAACTCTTGGTGCAAATCCAAGCGGAAGCTATGACCTCAATAACCCTCGTCA TATCCACCTCATTCCTTTTAATTATTACAATCCTTGTCTCGCCTCTGCTCATAACTATGAGCCCAAGCCC CCAGAAACCTAGCTGAGCAGATACCTACGTGAAAAATGCCGTCAGCGCTGCATTCTTTGTAAGCCTAGTA CCACTAATATTATACCTAACTCAAGGAGCAGAAAATGTTACTACAAACTGACAATGGATAAACACACAAA TATTCGACGCTAACATTAGCTTTAAGTTTGACTACTACTCCCTTATCTTCACCCCTATTGCCCTCTTCGT CACTTGGTCCATTTTAGAATTCGCACTATGATATATACACTCTGACCCTAACATAAACCGGTTCTTTAAA TATTTACTGTTGTTCTTGGTGGCCATAATCATTCTTGTCACAGCAAATAATTTATTCCAACTATTTATTG GATGGGAGGGCGTAGGTATCATATCTTTCCTACTCATTGGCTGATGACACGGCCGAGCAGACGCCAACAC CGCAAGCCTCCAAGCGGTAATTTATAACCGGGTAGGGGATATCGGACTAATCCTAGCCATGGCCTGGTTT GCCATAAATCTCAACTCTTGAGAGATACAGCAAATCTTCGCTCTGTCCGAAAACTACGATATGACAACCC CACTGCTTGCACTCGTCCTTGCGGCAGCGGGAAAGTCGGCCCAGTTTGGGCTACACCCATGGCTTCCGTC AGCCATAGAGGGCCCGACGCCAGTATCAGCATTACTCCACTCCAGCACCATAGTCGTTGCAGGTATCTTC CTACTAATTCGCCTCCATCCACTTATGGAGAGTAATCAGCTGGTGTTATCCGGCTGCTTATGCTTGGGGG CACTTACTACCCTCTATACAGCCACTTGCGCACTAACCCAGAATGACATCAAGAAAATTGTCGCCTTCTC CACATCGAGTCAACTTGGCCTCATGATAGTCACAATTGGGTTAAACCAGCCCCAGTTAGCCTTCCTCCAT ATTTGTACACACGCATTTTTCAAAGCTATGCTCTTCCTTTGCTCAGGTTCTATCATCCACAGCCTAAATG ACGAGCAGGACATTCGGAAAATGGGCGGCCTCCACAAACTTCTACCTATCACCTCAACCTGCCTTACAAT TGGAAGCCTGGCGCTAGCAGGCACCCCATTCCTCGCCGGGTTCTTCTCAAAAGACGCCATTATTGAGGCC CTCAATACTTCCTACCTGAACGCCTGAGCCCTTGTTCTTACACTTCTTGCTACCTCCTTTACTGCAGTTT ACAGCTTCCGAGTCGTCTACTTTGTTACCATAGGATCTCCACGGTTCCTTCCACTATCCCCTATCAATGA AGACAACCCGCTTATAGTTCAACCCATTAAGCGACTTGCCTGAGGAAGCATTATTGCAGGCCTTATTATT ACATCCAACTTTCTCCCTATAAAAACGCCAGTGATAACTATGCCTACTCCCCTAAAAGTGGCAGCCTTAA TAGTCGGTATAATTGGCCTCCTTACGGCTATAGAACTTGCAGCCAAAGCTAACGGCCCCTACGAAACTAC GTACAAGAACTCCACCCACCACTTCTCCAACATGCTCGGGTATTTCCCTTCATTAATACACCGGCTCTCC CCGAAAGCCAGCCTCGTTCTCGGGCGCTCAACCGCTACTAAGCTTGACCAAACCTGAGTTGAAATTGCGG GCCCCAAGTCGATCACTTTTACCCAAATGGTGTTAGCGCAAGCGGTGACCAATATTTCACGAGGCACAAT TAAGAAGTTTTTAACAGTCTTCCTTCTAACTATAGTCTTAGCAATCACCCTCACTATTATTTAAACCGCT CGGACGGTACCACGGCTTAGACCCCGGGTTAGCTCTAACACAACTAAGAGCGTTAGTAATAATACCCAGG CACAGGTTACTAGTATCGCCCCCCCGAAAGAGTATATTATAGCTACACCCCCTACATCCCCTCGTAAAAC GGAGAACTCTTTCAGCTCATCAACGGCTATTCAAGAGCCTTCATGCCATCCCCCTCAAAATACCCCACCT GCAAGTGCAACCCCTGCTGAATACACTAAAACATACCCTATTACTGAACGACTTCCCCAAGCCTCTGGGA ACGGCTCAGCTGCCAACGCTGCTGAGTAAGCAAATACTACAAGCATCCCCCCCAAGTAGATTAGAAAAAG GACTAAAGATAAGAAGGGCCCCCCACTACCAATCAGTACCCCACATCCCACCCCAGCCGCCACCATTAAC CCTAGGGCAGCAAAATAGGGTGTAGGATTAGACGCAACAGCAATCAATCCTATAATTAAGGCTATCAATA ATAGGGACACGAAATAACTCATGGTTCCCACTCGGGCTTTAACCGAGACTAGTGACTTGAAGAGCCACCG TTGTAATTCAACTACAGGAACAGTAATGGCAAGCCTACGAAAAACCCACCCGCTAATTAAAATCGCTAAT GGTGCACTGGTTGACCTCCCAACACCATCAAATATCTCTGCACTGTGAAACTTTGGATCCCTGCTGGGAT TGTGCTTAATTACTCAAATCCTAACTGGATTATTCCTAGCAATACATTATACCTCTGACATCTCGACCGC ATTTTCATCCGTGACGCACATTTGCCGAGACGTCAACTACGGCTGGCTTATCCGAAATATACACGCCAAC GGGGCATCATTTTTCTTCATCTGTATTTATATACATATCGCCCGGGGCCTCTACTACGGATCATATCTCT ATAAGGAGACCTGAAATATTGGAGTAGTTCTACTTCTCCTCGTTATAATAACGGCCTTTGTGGGCTACGT ACTCCCATGGGGTCAGATATCTTTCTGGGGAGCTACGGTCATCACGAATCTTCTCTCGGCAGTACCTTAC ATAGGGGATACCCTGGTGCAGTGGATTTGAGGGGGCTTCTCCGTAGACAACGCGACCCTGACCCGATTCT TTGCCTTCCACTTCCTATTCCCCTTCGTCATCGCTGGTGCAACTGTTCTTCACCTGCTTTTCCTACACGA GACGGGATCGAACAACCCCGCCGGGTTAAACTCCGACGCGGATAAGATCTCTTTCCACCCCTACTTCTCC TATAAAGACCTTCTTGGCTTCGTCCTAATGCTATTAGCCCTTACATCACTAACGTTGTTCTCCCCTACCC TGCTTGGTGACCCAGAGAACTTCACCCCTGCAAATCCCCTAGTCACCCCTCCACACATCCAACCGGAATG ATATTTCTTATTTGCCTACGCCATCCTGCGATCTATTCCGAACAAGCTAGGAGGCGTACTAGCACTGCTA TTTAGCATTCTGGTACTGTTAGTGGTCCCGGTTTTACACACCTCCAAGCAACGAGGACTAACCTTCCGAC CTATCACCCAATTCTTGTTCTGAACCTTGGTGGCGGATATACTCATTCTGACATGAATTGGAGGCATACC TGTAGAACACCCATATATTATTATTGGCCAGGTCGCCTCCGTCCTATACTTCGCATTATTCCTCCTTCTC GCCCCACTTGCGGGCTGAGTGGAGAATAAGGCCCTGAAATGAGCCTGCCCTAGTAGCTTAGTTTTTAAAG CGTCGGTCTTGTAATCCGAAGAGCGAGGGTTAAACCCCCTCCTAGCGCCCAGAAAAAGGAGACTTTAACT CCCGCCCCTGGCTCCCAAAGCCAGGATTCTAACGCTAAACTATTTTCTGGTGGACCAATATGGTTATACA TTCATGTATAGTACCTCATGTCTAGTAGACCAACATGCCTTTCTGCCTTATGCAATGTACCTGGGATGTA TGGGTGTGACATAACTATGTATTATCACCATTCAATTATATTAACCTAAAAGCAAGTACTAGCATCTAAG ACGTGCATAAACCAAATATATGCAATATACTAGGATTATATATGTATTATCACCATTCAGCTATATTAAC CTAAAAGCAAGTACTAATGTCTAAGACGTACATAAGCATATTATTAGGCCTCAGAAATAATTTATCTTAA CCCGGGATATAGGTTATCCCCCTAAATATCGCACTCAACATTTTCCTTGAAATAACTAACTACGATTTAC CTCGAGAATATTAATGCAGTAAGAGACCACCAACCTTGTCATGTAAGGCATATCATGCATGATAGAATCA GGGACATATTATGGAGGGTTGTAAACTATTAACTATTCCTTGCATCTGATTCCCCTGTCACGGGCATGGC ATGTTTAATCCACTCTAGTGAGGTATCCTTGCATCTGATTMTTGGTGTCATTACATACTCCTCATTAACC CCACATGCCGGGCATTCTTTTATATGCATAGCGTTCTCTTTTTTGGTAGCCTTTCRSTTACATTTCAGAG TGCAGGCTCAAGTAATATATCAGGGTGGTACATTTCCTTGCATGAGTAAATTAGGTTAATGATTATAAGA CATAACTTAAGAATTACATTATACTATATCAAGTGCATAACGTATCTGTACTTCTTCAATTAACCCTGTT ATAGATGCCCCCTTCTTCGGTTTTCACGCGACAAACCCCCTTACCCCCTACGCTCAGCAAATCCTGTTCT CCTTGTCAAACCCCGAAAGCAAGGA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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