Stats for family Icteridae

Stats for total mtDNA (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 45.9 54.1 5327 2375 3943 5120 12.5
Quiscalus quiscula 46.3 53.7 5377 2381 3919 5091 23.1
Agelaius phoeniceus 45.9 54.1 5330 2371 3983 5091 20.0
Stats for total protein-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 47.0 53.0 3911 1435 2653 3379 12.5
Quiscalus quiscula 47.3 52.7 3940 1444 2645 3349 23.1
Agelaius phoeniceus 46.9 53.1 3897 1438 2691 3352 20.0
Stats for D-loop (group size: 0 species)
There is no data for D-loop in this group.
Stats for total tRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 41.4 58.6 369 268 395 505 12.5
Quiscalus quiscula 42.1 57.9 379 268 387 504 23.1
Agelaius phoeniceus 41.8 58.2 376 267 392 503 20.0
Stats for total rRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 45.7 54.3 663 515 543 854 12.5
Quiscalus quiscula 46.0 54.0 669 514 536 853 23.1
Agelaius phoeniceus 45.9 54.1 665 515 537 855 20.0
Stats for ATP6 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 45.6 54.4 244 68 164 208 12.5
Quiscalus quiscula 48.2 51.8 257 73 155 199 23.1
Agelaius phoeniceus 46.1 53.9 240 75 171 198 20.0
Stats for ATP8 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 45.8 54.2 65 12 40 51 12.5
Quiscalus quiscula 45.2 54.8 64 12 41 51 23.1
Agelaius phoeniceus 45.2 54.8 62 14 46 46 20.0
Stats for COX1 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 48.3 51.7 487 262 367 435 12.5
Quiscalus quiscula 48.0 52.0 489 256 367 439 23.1
Agelaius phoeniceus 46.6 53.4 469 253 388 441 20.0
Stats for COX2 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 47.2 52.8 222 101 155 206 12.5
Quiscalus quiscula 47.5 52.5 227 98 151 208 23.1
Agelaius phoeniceus 48.4 51.6 230 101 149 204 20.0
Stats for COX3 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 48.9 51.1 262 121 187 214 12.5
Quiscalus quiscula 48.5 51.5 262 118 189 215 23.1
Agelaius phoeniceus 48.1 51.9 259 118 192 215 20.0
Stats for CYTB (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 47.6 52.4 394 150 281 318 12.5
Quiscalus quiscula 47.4 52.6 393 149 277 324 23.1
Agelaius phoeniceus 46.8 53.2 385 150 291 317 20.0
Stats for ND1 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 47.0 53.0 326 134 254 264 12.5
Quiscalus quiscula 48.7 51.3 326 150 258 244 23.1
Agelaius phoeniceus 46.6 53.4 319 137 264 258 20.0
Stats for ND2 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 44.6 55.4 359 105 261 315 12.5
Quiscalus quiscula 44.9 55.1 362 105 264 309 23.1
Agelaius phoeniceus 45.9 54.1 369 108 252 311 20.0
Stats for ND3 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 45.6 54.4 116 44 94 97 12.5
Quiscalus quiscula 47.6 52.4 122 45 90 94 23.1
Agelaius phoeniceus 46.7 53.3 121 43 87 100 20.0
Stats for ND4 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 46.4 53.6 493 147 312 426 12.5
Quiscalus quiscula 47.1 52.9 498 151 310 419 23.1
Agelaius phoeniceus 46.8 53.2 494 151 315 418 20.0
Stats for ND4L (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 49.2 50.8 108 38 72 79 12.5
Quiscalus quiscula 47.8 52.2 105 37 73 82 23.1
Agelaius phoeniceus 48.8 51.2 109 36 72 80 20.0
Stats for ND5 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 45.9 54.1 628 206 410 574 12.5
Quiscalus quiscula 45.8 54.2 629 204 411 574 23.1
Agelaius phoeniceus 46.0 54.0 632 205 408 573 20.0
Stats for ND6 (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 49.9 50.1 210 49 60 200 12.5
Quiscalus quiscula 49.5 50.5 209 48 63 199 23.1
Agelaius phoeniceus 50.1 49.9 211 49 60 199 20.0
Stats for 12S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 48.8 51.2 275 202 196 304 12.5
Quiscalus quiscula 48.9 51.1 273 203 195 303 23.1
Agelaius phoeniceus 48.5 51.5 269 203 198 304 20.0
Stats for 16S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Euphagus cyanocephalus 43.9 56.1 388 313 347 550 12.5
Quiscalus quiscula 44.2 55.8 396 311 341 550 23.1
Agelaius phoeniceus 44.3 55.7 396 312 339 551 20.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.