Stats for family Ardeidae
Species in family:
| Stats for total mtDNA (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.6 - 45.3% | 54.7 - 57.4% | 5342 - 6112 | 2339 - 2690 | 4033 - 5170 | 5469 - 6509 | 11.3 - 37.5 |
| Median | 45.1% | 55.9% | 5765 | 2575 | 4528 | 5771 | 23.0 |
| Average ± stdev | 44.4 ± 1.0% | 55.6 ± 1.0% | 5711 ± 238 | 2560 ± 116 | 4520 ± 362 | 5862 ± 321 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.02 | 0.04 | 0.05 | 0.08 | 0.05 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.86 | -0.86 | -0.42 | 0.35 | -0.54 | -0.76 | - |
| Pearson p-value (two tailed) |
2.85E-02 | 2.85E-02 | 4.02E-01 | 4.99E-01 | 2.70E-01 | 7.95E-02 | - |
| Stats for total protein-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.3 - 46.8% | 53.2 - 54.7% | 3754 - 4080 | 1355 - 1439 | 2616 - 2760 | 3382 - 3715 | 11.3 - 37.5 |
| Median | 46.6% | 54.3% | 3869 | 1401 | 2730 | 3460 | 23.0 |
| Average ± stdev | 46.1 ± 0.6% | 53.9 ± 0.6% | 3887 ± 100 | 1394 ± 34 | 2706 ± 48 | 3469 ± 114 | 23.4 ± 7.7 |
| Coefficient of variation | 0.01 | 0.01 | 0.03 | 0.02 | 0.02 | 0.03 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.53 | -0.53 | -0.64 | 0.74 | -0.42 | -0.92 | - |
| Pearson p-value (two tailed) |
2.75E-01 | 2.75E-01 | 1.67E-01 | 9.34E-02 | 4.02E-01 | 1.03E-02 | - |
| Stats for D-loop (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Stats for total tRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.8 - 43.7% | 56.3 - 58.2% | 398 - 462 | 261 - 291 | 376 - 438 | 495 - 574 | 11.3 - 37.5 |
| Median | 42.7% | 57.4% | 410 | 273 | 399 | 531 | 23.0 |
| Average ± stdev | 42.7 ± 0.6% | 57.3 ± 0.6% | 414 ± 22 | 272 ± 9 | 396 ± 22 | 524 ± 26 | 23.4 ± 7.7 |
| Coefficient of variation | 0.01 | 0.01 | 0.05 | 0.03 | 0.06 | 0.05 | 0.33 |
| Pearson correlation coefficient with log10MLS |
-0.39 | 0.39 | -0.79 | -0.62 | -0.44 | -0.49 | - |
| Pearson p-value (two tailed) |
4.47E-01 | 4.47E-01 | 6.43E-02 | 1.90E-01 | 3.79E-01 | 3.19E-01 | - |
| Stats for total rRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.9 - 46.8% | 53.2 - 55.1% | 674 - 719 | 483 - 499 | 517 - 564 | 831 - 858 | 11.3 - 37.5 |
| Median | 46.1% | 54.0% | 687 | 490 | 547 | 855 | 23.0 |
| Average ± stdev | 45.9 ± 0.7% | 54.1 ± 0.7% | 688 ± 14 | 491 ± 5 | 543 ± 14 | 847 ± 9 | 23.4 ± 7.7 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.01 | 0.03 | 0.01 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.69 | -0.69 | 0.29 | 0.86 | -0.40 | -0.70 | - |
| Pearson p-value (two tailed) |
1.27E-01 | 1.27E-01 | 5.84E-01 | 2.80E-02 | 4.30E-01 | 1.22E-01 | - |
| Stats for ATP6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 47.7% | 52.3 - 56.1% | 239 - 255 | 61 - 71 | 153 - 170 | 205 - 214 | 11.3 - 37.5 |
| Median | 46.8% | 54.2% | 252 | 66 | 162 | 209 | 23.0 |
| Average ± stdev | 46.1 ± 1.4% | 53.9 ± 1.4% | 249 ± 5 | 65 ± 3 | 160 ± 6 | 208 ± 2 | 23.4 ± 7.7 |
| Coefficient of variation | 0.03 | 0.03 | 0.02 | 0.05 | 0.04 | 0.01 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.93 | -0.93 | 0.88 | 0.81 | -0.86 | -0.87 | - |
| Pearson p-value (two tailed) |
6.50E-03 | 6.50E-03 | 2.05E-02 | 5.04E-02 | 2.91E-02 | 2.45E-02 | - |
| Stats for ATP8 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.3 - 47.0% | 53.0 - 60.7% | 58 - 66 | 8 - 13 | 35 - 41 | 52 - 61 | 11.3 - 37.5 |
| Median | 44.6% | 55.4% | 65 | 12 | 39 | 54 | 23.0 |
| Average ± stdev | 44.2 ± 2.7% | 55.8 ± 2.7% | 63 ± 2 | 10 ± 1 | 38 ± 1 | 55 ± 3 | 23.4 ± 7.7 |
| Coefficient of variation | 0.06 | 0.05 | 0.04 | 0.15 | 0.05 | 0.06 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.84 | -0.84 | 0.81 | 0.79 | -0.45 | -0.79 | - |
| Pearson p-value (two tailed) |
3.45E-02 | 3.45E-02 | 5.30E-02 | 6.39E-02 | 3.76E-01 | 6.25E-02 | - |
| Stats for COX1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.9 - 46.6% | 53.4 - 55.1% | 441 - 480 | 239 - 258 | 392 - 420 | 432 - 443 | 11.3 - 37.5 |
| Median | 46.4% | 53.9% | 465 | 255 | 400 | 438 | 23.0 |
| Average ± stdev | 46.0 ± 0.7% | 54.0 ± 0.7% | 461 ± 11 | 251 ± 6 | 400 ± 9 | 436 ± 3 | 23.4 ± 7.7 |
| Coefficient of variation | 0.01 | 0.01 | 0.03 | 0.02 | 0.02 | 0.01 | 0.33 |
| Pearson correlation coefficient with log10MLS |
-0.05 | 0.05 | -0.48 | 0.83 | 0.20 | -0.40 | - |
| Pearson p-value (two tailed) |
9.30E-01 | 9.30E-01 | 3.38E-01 | 4.09E-02 | 6.97E-01 | 4.31E-01 | - |
| Stats for COX2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 46.6% | 53.4 - 56.1% | 204 - 224 | 93 - 101 | 155 - 171 | 209 - 215 | 11.3 - 37.5 |
| Median | 46.3% | 54.4% | 218 | 97 | 157 | 213 | 23.0 |
| Average ± stdev | 45.7 ± 1.0% | 54.3 ± 1.0% | 215 ± 6 | 96 ± 2 | 159 ± 5 | 212 ± 2 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.03 | 0.03 | 0.01 | 0.33 |
| Pearson correlation coefficient with log10MLS |
-0.20 | 0.20 | -0.38 | 0.43 | 0.07 | 0.40 | - |
| Pearson p-value (two tailed) |
7.08E-01 | 7.08E-01 | 4.55E-01 | 3.97E-01 | 8.90E-01 | 4.32E-01 | - |
| Stats for COX3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.2 - 47.8% | 52.2 - 53.8% | 243 - 256 | 109 - 123 | 180 - 198 | 217 - 239 | 11.3 - 37.5 |
| Median | 47.2% | 53.4% | 252 | 119 | 192 | 224 | 23.0 |
| Average ± stdev | 46.9 ± 0.7% | 53.1 ± 0.7% | 249 ± 4 | 117 ± 4 | 190 ± 5 | 225 ± 6 | 23.4 ± 7.7 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.04 | 0.03 | 0.03 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.49 | -0.49 | -0.15 | 0.71 | 0.48 | -0.79 | - |
| Pearson p-value (two tailed) |
3.28E-01 | 3.28E-01 | 7.73E-01 | 1.13E-01 | 3.35E-01 | 5.96E-02 | - |
| Stats for CYTB (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 47.3 - 49.7% | 50.3 - 52.7% | 396 - 424 | 136 - 148 | 261 - 284 | 307 - 329 | 11.3 - 37.5 |
| Median | 48.9% | 52.6% | 416 | 144 | 273 | 317 | 23.0 |
| Average ± stdev | 48.4 ± 1.1% | 51.6 ± 1.1% | 410 ± 9 | 142 ± 3 | 272 ± 7 | 317 ± 7 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.64 | -0.64 | 0.43 | 0.85 | -0.33 | -0.72 | - |
| Pearson p-value (two tailed) |
1.74E-01 | 1.74E-01 | 3.92E-01 | 3.38E-02 | 5.22E-01 | 1.07E-01 | - |
| Stats for ND1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.8 - 47.3% | 52.7 - 54.2% | 324 - 337 | 118 - 137 | 259 - 265 | 253 - 269 | 11.3 - 37.5 |
| Median | 47.1% | 53.7% | 327 | 129 | 262 | 260 | 23.0 |
| Average ± stdev | 46.7 ± 0.6% | 53.3 ± 0.6% | 328 ± 4 | 128 ± 6 | 261 ± 1 | 259 ± 5 | 23.4 ± 7.7 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.05 | 0.01 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.82 | -0.82 | -0.28 | 0.91 | 0.20 | -0.91 | - |
| Pearson p-value (two tailed) |
4.51E-02 | 4.51E-02 | 5.93E-01 | 1.12E-02 | 7.00E-01 | 1.12E-02 | - |
| Stats for ND2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.6 - 45.1% | 54.9 - 58.4% | 337 - 365 | 93 - 115 | 238 - 265 | 327 - 345 | 11.3 - 37.5 |
| Median | 43.7% | 57.5% | 349 | 105 | 263 | 339 | 23.0 |
| Average ± stdev | 43.1 ± 1.4% | 56.9 ± 1.4% | 347 ± 10 | 101 ± 7 | 253 ± 10 | 338 ± 6 | 23.4 ± 7.7 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.08 | 0.04 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.15 | -0.15 | -0.42 | 0.80 | 0.28 | -0.81 | - |
| Pearson p-value (two tailed) |
7.80E-01 | 7.80E-01 | 4.01E-01 | 5.45E-02 | 5.85E-01 | 4.90E-02 | - |
| Stats for ND3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.8 - 47.4% | 52.6 - 56.2% | 117 - 127 | 37 - 44 | 91 - 100 | 91 - 98 | 11.3 - 37.5 |
| Median | 47.4% | 53.7% | 125 | 42 | 97 | 94 | 23.0 |
| Average ± stdev | 46.3 ± 1.5% | 53.7 ± 1.5% | 121 ± 4 | 41 ± 2 | 95 ± 3 | 93 ± 2 | 23.4 ± 7.7 |
| Coefficient of variation | 0.03 | 0.03 | 0.03 | 0.06 | 0.03 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
-0.47 | 0.47 | -0.67 | 0.26 | 0.41 | 0.41 | - |
| Pearson p-value (two tailed) |
3.48E-01 | 3.48E-01 | 1.48E-01 | 6.17E-01 | 4.18E-01 | 4.16E-01 | - |
| Stats for ND4 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.6 - 46.5% | 53.5 - 55.4% | 473 - 499 | 133 - 148 | 312 - 339 | 410 - 434 | 11.3 - 37.5 |
| Median | 45.9% | 55.0% | 488 | 142 | 333 | 424 | 23.0 |
| Average ± stdev | 45.5 ± 0.8% | 54.5 ± 0.8% | 487 ± 8 | 139 ± 6 | 329 ± 9 | 421 ± 7 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.04 | 0.03 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.60 | -0.60 | 0.16 | 0.73 | -0.29 | -0.40 | - |
| Pearson p-value (two tailed) |
2.04E-01 | 2.04E-01 | 7.59E-01 | 1.02E-01 | 5.76E-01 | 4.30E-01 | - |
| Stats for ND4L (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.8 - 48.1% | 51.9 - 54.2% | 100 - 108 | 34 - 38 | 66 - 74 | 85 - 89 | 11.3 - 37.5 |
| Median | 47.5% | 52.9% | 105 | 36 | 69 | 88 | 23.0 |
| Average ± stdev | 47.1 ± 0.8% | 52.9 ± 0.8% | 104 ± 2 | 35 ± 1 | 69 ± 2 | 87 ± 1 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.03 | 0.04 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
-0.18 | 0.18 | -0.29 | 0.29 | 0.30 | -0.32 | - |
| Pearson p-value (two tailed) |
7.27E-01 | 7.27E-01 | 5.75E-01 | 5.72E-01 | 5.69E-01 | 5.43E-01 | - |
| Stats for ND5 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.9 - 46.4% | 53.6 - 55.1% | 609 - 643 | 191 - 215 | 396 - 415 | 560 - 595 | 11.3 - 37.5 |
| Median | 46.3% | 54.4% | 632 | 207 | 408 | 581 | 23.0 |
| Average ± stdev | 45.7 ± 0.7% | 54.3 ± 0.7% | 627 ± 10 | 202 ± 8 | 407 ± 6 | 577 ± 12 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.04 | 0.02 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.77 | -0.77 | 0.25 | 0.71 | 0.19 | -0.84 | - |
| Pearson p-value (two tailed) |
7.17E-02 | 7.17E-02 | 6.29E-01 | 1.11E-01 | 7.16E-01 | 3.52E-02 | - |
| Stats for ND6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.6 - 52.0% | 48.0 - 55.4% | 182 - 200 | 48 - 64 | 50 - 69 | 179 - 220 | 11.3 - 37.5 |
| Median | 47.7% | 52.9% | 192 | 55 | 64 | 213 | 23.0 |
| Average ± stdev | 47.7 ± 2.4% | 52.3 ± 2.4% | 190 ± 5 | 54 ± 5 | 60 ± 6 | 208 ± 13 | 23.4 ± 7.7 |
| Coefficient of variation | 0.05 | 0.05 | 0.03 | 0.09 | 0.10 | 0.07 | 0.33 |
| Pearson correlation coefficient with log10MLS |
-0.17 | 0.17 | -0.35 | 0.02 | 0.01 | 0.13 | - |
| Pearson p-value (two tailed) |
7.54E-01 | 7.54E-01 | 4.90E-01 | 9.69E-01 | 9.89E-01 | 8.07E-01 | - |
| Stats for 12S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.9 - 49.2% | 50.8 - 53.1% | 260 - 282 | 192 - 201 | 185 - 204 | 306 - 314 | 11.3 - 37.5 |
| Median | 47.8% | 52.4% | 266 | 197 | 200 | 312 | 23.0 |
| Average ± stdev | 47.8 ± 0.8% | 52.2 ± 0.8% | 267 ± 7 | 197 ± 2 | 197 ± 6 | 310 ± 2 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.01 | 0.03 | 0.01 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.30 | -0.30 | -0.01 | 0.52 | -0.33 | -0.36 | - |
| Pearson p-value (two tailed) |
5.66E-01 | 5.66E-01 | 9.88E-01 | 2.94E-01 | 5.29E-01 | 4.88E-01 | - |
| Stats for 16S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.6 - 45.3% | 54.7 - 56.4% | 408 - 437 | 290 - 303 | 332 - 360 | 525 - 547 | 11.3 - 37.5 |
| Median | 45.2% | 54.8% | 421 | 292 | 350 | 544 | 23.0 |
| Average ± stdev | 44.8 ± 0.8% | 55.2 ± 0.8% | 420 ± 9 | 294 ± 4 | 346 ± 9 | 536 ± 8 | 23.4 ± 7.7 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.03 | 0.02 | 0.33 |
| Pearson correlation coefficient with log10MLS |
0.77 | -0.77 | 0.44 | 0.74 | -0.40 | -0.66 | - |
| Pearson p-value (two tailed) |
7.23E-02 | 7.23E-02 | 3.77E-01 | 9.24E-02 | 4.32E-01 | 1.54E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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