Stats for family Laridae
Species in family:
| Stats for total mtDNA (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 45.2 | 54.8 | 5220 | 2380 | 4029 | 5178 | 32.9 |
| Stats for total protein-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 45.8 | 54.2 | 3772 | 1438 | 2739 | 3421 | 32.9 |
| Stats for D-loop (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 40.5 | 59.5 | 340 | 173 | 343 | 412 | 32.9 |
| Stats for total tRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 42.3 | 57.7 | 387 | 267 | 392 | 501 | 32.9 |
| Stats for total rRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 46.7 | 53.3 | 689 | 510 | 544 | 826 | 32.9 |
| Stats for ATP6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 47.7 | 52.3 | 257 | 69 | 160 | 198 | 32.9 |
| Stats for ATP8 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 42.3 | 57.7 | 61 | 10 | 39 | 58 | 32.9 |
| Stats for COX1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 46.6 | 53.4 | 473 | 250 | 401 | 427 | 32.9 |
| Stats for COX2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 46.6 | 53.4 | 216 | 103 | 164 | 201 | 32.9 |
| Stats for COX3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 46.4 | 53.6 | 234 | 130 | 200 | 220 | 32.9 |
| Stats for CYTB (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 45.8 | 54.2 | 383 | 141 | 284 | 335 | 32.9 |
| Stats for ND1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 46.3 | 53.7 | 315 | 138 | 268 | 257 | 32.9 |
| Stats for ND2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 43.8 | 56.2 | 344 | 111 | 249 | 335 | 32.9 |
| Stats for ND3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 45.5 | 54.5 | 114 | 43 | 94 | 94 | 32.9 |
| Stats for ND4 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 45.9 | 54.1 | 488 | 144 | 320 | 426 | 32.9 |
| Stats for ND4L (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 46.5 | 53.5 | 95 | 43 | 73 | 86 | 32.9 |
| Stats for ND5 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 44.6 | 55.4 | 606 | 203 | 434 | 572 | 32.9 |
| Stats for ND6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 46.7 | 53.3 | 189 | 55 | 57 | 221 | 32.9 |
| Stats for 12S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 49.3 | 50.7 | 271 | 205 | 191 | 298 | 32.9 |
| Stats for 16S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Chroicocephalus ridibundus | 45.1 | 54.9 | 418 | 305 | 353 | 528 | 32.9 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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