Viewing data for Micromesistius poutassou


Scientific name Micromesistius poutassou
Common name Blue whiting
Maximum lifespan 20.00 years (Micromesistius poutassou@AnAge)

Total mtDNA (size: 16573 bases) GC AT G C A T
Base content (bases) 7536 9037 4680 2856 4492 4545
Base content per 1 kb (bases) 455 545 282 172 271 274
Base content (%) 45.5% 54.5%
Total protein-coding genes (size: 11405 bases) GC AT G C A T
Base content (bases) 5274 6131 3448 1826 3208 2923
Base content per 1 kb (bases) 462 538 302 160 281 256
Base content (%) 46.2% 53.8%
D-loop (size: 904 bases) GC AT G C A T
Base content (bases) 347 557 206 141 284 273
Base content per 1 kb (bases) 384 616 228 156 314 302
Base content (%) 38.4% 61.6%
Total tRNA-coding genes (size: 1536 bases) GC AT G C A T
Base content (bases) 705 831 384 321 376 455
Base content per 1 kb (bases) 459 541 250 209 245 296
Base content (%) 45.9% 54.1%
Total rRNA-coding genes (size: 2613 bases) GC AT G C A T
Base content (bases) 1150 1463 610 540 599 864
Base content per 1 kb (bases) 440 560 233 207 229 331
Base content (%) 44.0% 56.0%
12S rRNA gene (size: 949 bases) GC AT G C A T
Base content (bases) 429 520 224 205 214 306
Base content per 1 kb (bases) 452 548 236 216 226 322
Base content (%) 45.2% 54.8%
16S rRNA gene (size: 1664 bases) GC AT G C A T
Base content (bases) 721 943 386 335 385 558
Base content per 1 kb (bases) 433 567 232 201 231 335
Base content (%) 43.3% 56.7%

ATP6 (size: 682 bases) GC AT G C A T
Base content (bases) 312 370 216 96 193 177
Base content per 1 kb (bases) 457 543 317 141 283 260
Base content (%) 45.7% 54.3%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 69 99 53 16 47 52
Base content per 1 kb (bases) 411 589 315 95 280 310
Base content (%) 41.1% 58.9%
COX1 (size: 1551 bases) GC AT G C A T
Base content (bases) 730 821 440 290 448 373
Base content per 1 kb (bases) 471 529 284 187 289 240
Base content (%) 47.1% 52.9%
COX2 (size: 691 bases) GC AT G C A T
Base content (bases) 302 389 197 105 189 200
Base content per 1 kb (bases) 437 563 285 152 274 289
Base content (%) 43.7% 56.3%
COX3 (size: 786 bases) GC AT G C A T
Base content (bases) 355 431 226 129 229 202
Base content per 1 kb (bases) 452 548 288 164 291 257
Base content (%) 45.2% 54.8%
CYTB (size: 1141 bases) GC AT G C A T
Base content (bases) 523 618 337 186 348 270
Base content per 1 kb (bases) 458 542 295 163 305 237
Base content (%) 45.8% 54.2%
ND1 (size: 975 bases) GC AT G C A T
Base content (bases) 457 518 288 169 285 233
Base content per 1 kb (bases) 469 531 295 173 292 239
Base content (%) 46.9% 53.1%
ND2 (size: 1045 bases) GC AT G C A T
Base content (bases) 498 547 344 154 280 267
Base content per 1 kb (bases) 477 523 329 147 268 256
Base content (%) 47.7% 52.3%
ND3 (size: 349 bases) GC AT G C A T
Base content (bases) 159 190 106 53 109 81
Base content per 1 kb (bases) 456 544 304 152 312 232
Base content (%) 45.6% 54.4%
ND4 (size: 1381 bases) GC AT G C A T
Base content (bases) 634 747 425 209 405 342
Base content per 1 kb (bases) 459 541 308 151 293 248
Base content (%) 45.9% 54.1%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 144 153 95 49 85 68
Base content per 1 kb (bases) 485 515 320 165 286 229
Base content (%) 48.5% 51.5%
ND5 (size: 1839 bases) GC AT G C A T
Base content (bases) 839 1000 556 283 513 487
Base content per 1 kb (bases) 456 544 302 154 279 265
Base content (%) 45.6% 54.4%
ND6 (size: 522 bases) GC AT G C A T
Base content (bases) 259 263 170 89 82 181
Base content per 1 kb (bases) 496 504 326 170 157 347
Base content (%) 49.6% 50.4%

ATP6 (size: 682 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (5.31%)
Alanine (Ala, A)
n = 18 (7.96%)
Serine (Ser, S)
n = 13 (5.75%)
Threonine (Thr, T)
n = 18 (7.96%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 13 (5.75%)
Leucine (Leu, L)
n = 53 (23.45%)
Isoleucine (Ile, I)
n = 17 (7.52%)
Methionine (Met, M)
n = 14 (6.19%)
Proline (Pro, P)
n = 17 (7.52%)
Phenylalanine (Phe, F)
n = 12 (5.31%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 5 (2.21%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 8 (3.54%)
Glutamine (Gln, Q)
n = 7 (3.1%)
Histidine (His, H)
n = 5 (2.21%)
Lysine (Lys, K)
n = 1 (0.44%)
Arginine (Arg, R)
n = 6 (2.65%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 7 8 10 13 19 7 2 6 1 3 5 4 1 3 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 0 5 6 7 0 2 3 7 0 5 8 4 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 11 1 2 3 2 0 0 6 1 2 0 2 2 6 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 3 1 1 0 1 0 0 1 5 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 84 64 31
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 60 29 109
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 72 84 52
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPAPWFMIFMFTWAIFLTILPPKVMAHTFPSEPSPQGMTTLKTTPWNWPWH*
Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.82%)
Alanine (Ala, A)
n = 3 (5.45%)
Serine (Ser, S)
n = 2 (3.64%)
Threonine (Thr, T)
n = 7 (12.73%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.82%)
Leucine (Leu, L)
n = 4 (7.27%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 5 (9.09%)
Proline (Pro, P)
n = 10 (18.18%)
Phenylalanine (Phe, F)
n = 5 (9.09%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 1 (1.82%)
Asparagine (Asn, N)
n = 2 (3.64%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 2 (3.64%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 1 3 2 0 1 0 1 1 1 0 0 1 0 4 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 0 1 2 0 1 0 0 0 3 5 2 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 2 0 1 0 0 0 0 1 0 0 0 0 1 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 1 0 0 0 2 0 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
6 17 20 13
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
7 21 10 18
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 15 22 16
COX1 (size: 1551 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.91%)
Alanine (Ala, A)
n = 48 (9.3%)
Serine (Ser, S)
n = 27 (5.23%)
Threonine (Thr, T)
n = 37 (7.17%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 39 (7.56%)
Leucine (Leu, L)
n = 63 (12.21%)
Isoleucine (Ile, I)
n = 40 (7.75%)
Methionine (Met, M)
n = 26 (5.04%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 11 (2.13%)
Asparagine (Asn, N)
n = 14 (2.71%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 9 (1.74%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
22 18 12 13 19 14 4 12 7 1 7 8 17 7 17 25
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
14 0 1 10 23 13 2 6 20 9 11 12 11 2 3 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 22 1 6 9 6 2 1 3 6 12 1 1 7 7 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
16 7 4 7 8 8 0 0 2 5 2 0 0 0 1 16
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
159 114 129 115
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 136 94 210
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
54 190 150 123
COX2 (size: 691 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 18 (7.86%)
Serine (Ser, S)
n = 17 (7.42%)
Threonine (Thr, T)
n = 9 (3.93%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 16 (6.99%)
Leucine (Leu, L)
n = 29 (12.66%)
Isoleucine (Ile, I)
n = 22 (9.61%)
Methionine (Met, M)
n = 11 (4.8%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 9 (3.93%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 15 (6.55%)
Asparagine (Asn, N)
n = 4 (1.75%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 13 8 6 6 8 2 7 7 1 6 6 3 1 5 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 1 3 5 9 1 3 2 4 0 3 7 4 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 3 0 4 4 6 0 1 2 5 4 0 0 1 3 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 14 1 1 12 4 0 1 3 2 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
71 60 53 46
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 55 63 87
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 82 84 55
COX3 (size: 786 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.05%)
Alanine (Ala, A)
n = 21 (8.05%)
Serine (Ser, S)
n = 13 (4.98%)
Threonine (Thr, T)
n = 26 (9.96%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.13%)
Leucine (Leu, L)
n = 31 (11.88%)
Isoleucine (Ile, I)
n = 15 (5.75%)
Methionine (Met, M)
n = 8 (3.07%)
Proline (Pro, P)
n = 12 (4.6%)
Phenylalanine (Phe, F)
n = 24 (9.2%)
Tyrosine (Tyr, Y)
n = 12 (4.6%)
Tryptophan (Trp, W)
n = 12 (4.6%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.83%)
Asparagine (Asn, N)
n = 1 (0.38%)
Glutamine (Gln, Q)
n = 7 (2.68%)
Histidine (His, H)
n = 17 (6.51%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 6 (2.3%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 9 6 10 6 7 2 6 6 1 6 3 7 0 10 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 4 6 11 0 2 12 5 2 4 7 1 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 12 1 3 1 6 0 1 2 5 7 2 0 0 1 9
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 9 1 1 4 2 0 1 1 3 1 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
73 67 55 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 69 55 94
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 90 92 68
CYTB (size: 1141 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.86%)
Alanine (Ala, A)
n = 28 (7.39%)
Serine (Ser, S)
n = 21 (5.54%)
Threonine (Thr, T)
n = 24 (6.33%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 32 (8.44%)
Leucine (Leu, L)
n = 58 (15.3%)
Isoleucine (Ile, I)
n = 22 (5.8%)
Methionine (Met, M)
n = 14 (3.69%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 34 (8.97%)
Tyrosine (Tyr, Y)
n = 13 (3.43%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 7 (1.85%)
Asparagine (Asn, N)
n = 19 (5.01%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 8 (2.11%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 11 10 19 12 17 3 4 3 3 8 9 11 4 13 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 3 11 8 8 1 3 9 9 5 4 15 3 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 10 0 7 5 7 1 0 1 4 9 1 3 5 14 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 6 1 4 7 5 3 0 3 2 3 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
104 99 88 89
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 94 76 160
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
32 144 106 98
ND1 (size: 975 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (5.25%)
Alanine (Ala, A)
n = 35 (10.8%)
Serine (Ser, S)
n = 28 (8.64%)
Threonine (Thr, T)
n = 18 (5.56%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 26 (8.02%)
Leucine (Leu, L)
n = 57 (17.59%)
Isoleucine (Ile, I)
n = 18 (5.56%)
Methionine (Met, M)
n = 12 (3.7%)
Proline (Pro, P)
n = 22 (6.79%)
Phenylalanine (Phe, F)
n = 20 (6.17%)
Tyrosine (Tyr, Y)
n = 13 (4.01%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 10 (3.09%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 10 6 11 15 13 5 11 5 1 6 9 7 4 9 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 1 9 12 13 1 2 5 7 3 7 9 6 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 10 1 5 7 8 2 0 6 5 8 2 2 3 7 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 6 5 2 2 5 2 2 1 4 1 0 0 0 1 6
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
93 83 71 78
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
40 97 55 133
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
36 108 107 74
ND2 (size: 1045 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 29 (8.36%)
Threonine (Thr, T)
n = 38 (10.95%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 68 (19.6%)
Isoleucine (Ile, I)
n = 23 (6.63%)
Methionine (Met, M)
n = 19 (5.48%)
Proline (Pro, P)
n = 20 (5.76%)
Phenylalanine (Phe, F)
n = 15 (4.32%)
Tyrosine (Tyr, Y)
n = 6 (1.73%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 10 (2.88%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 11 12 13 20 14 5 12 11 3 1 1 5 3 8 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 0 1 9 23 7 2 0 8 5 3 5 9 5 1 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 14 3 7 7 7 1 1 6 1 5 3 4 3 7 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 3 1 0 3 5 3 2 0 2 1 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 98 105 71
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
40 121 52 135
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
40 125 110 73
ND3 (size: 1045 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 29 (8.36%)
Threonine (Thr, T)
n = 38 (10.95%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 68 (19.6%)
Isoleucine (Ile, I)
n = 23 (6.63%)
Methionine (Met, M)
n = 19 (5.48%)
Proline (Pro, P)
n = 20 (5.76%)
Phenylalanine (Phe, F)
n = 15 (4.32%)
Tyrosine (Tyr, Y)
n = 6 (1.73%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 10 (2.88%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 11 12 13 20 14 5 12 11 3 1 1 5 3 8 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 0 1 9 23 7 2 0 8 5 3 5 9 5 1 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 14 3 7 7 7 1 1 6 1 5 3 4 3 7 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 3 1 0 3 5 3 2 0 2 1 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 98 105 71
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
40 121 52 135
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
40 125 110 73
ND4 (size: 1381 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 27 (5.88%)
Alanine (Ala, A)
n = 40 (8.71%)
Serine (Ser, S)
n = 28 (6.1%)
Threonine (Thr, T)
n = 40 (8.71%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 14 (3.05%)
Leucine (Leu, L)
n = 102 (22.22%)
Isoleucine (Ile, I)
n = 33 (7.19%)
Methionine (Met, M)
n = 28 (6.1%)
Proline (Pro, P)
n = 28 (6.1%)
Phenylalanine (Phe, F)
n = 16 (3.49%)
Tyrosine (Tyr, Y)
n = 14 (3.05%)
Tryptophan (Trp, W)
n = 18 (3.92%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 9 (1.96%)
Asparagine (Asn, N)
n = 14 (3.05%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 9 (1.96%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 13 20 21 28 19 11 20 9 2 4 5 4 1 8 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
8 1 3 11 20 6 3 6 12 5 4 9 14 4 1 13
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 9 4 6 7 6 0 1 8 6 8 3 3 5 9 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 4 5 1 3 9 1 2 2 7 0 0 0 0 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
94 138 134 94
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
69 127 71 193
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
46 160 137 117
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 16 (16.33%)
Serine (Ser, S)
n = 7 (7.14%)
Threonine (Thr, T)
n = 9 (9.18%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 3 (3.06%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 1 (1.02%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 2 (2.04%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 1 (1.02%)
Glutamine (Gln, Q)
n = 3 (3.06%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 0 5 6 3 7 1 4 2 1 0 2 1 0 4 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 1 3 9 2 2 1 2 1 1 1 1 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 5 0 0 4 2 0 1 0 0 1 0 2 0 1 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 2 0 0 2 0 0 1 0 1 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
28 29 19 23
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
12 33 15 39
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 33 34 23
ND5 (size: 1839 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 33 (5.39%)
Alanine (Ala, A)
n = 58 (9.48%)
Serine (Ser, S)
n = 51 (8.33%)
Threonine (Thr, T)
n = 60 (9.8%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 30 (4.9%)
Leucine (Leu, L)
n = 109 (17.81%)
Isoleucine (Ile, I)
n = 42 (6.86%)
Methionine (Met, M)
n = 24 (3.92%)
Proline (Pro, P)
n = 27 (4.41%)
Phenylalanine (Phe, F)
n = 36 (5.88%)
Tyrosine (Tyr, Y)
n = 9 (1.47%)
Tryptophan (Trp, W)
n = 14 (2.29%)
Aspartic acid (Asp, D)
n = 13 (2.12%)
Glutamic acid (Glu, E)
n = 11 (1.8%)
Asparagine (Asn, N)
n = 24 (3.92%)
Glutamine (Gln, Q)
n = 19 (3.1%)
Histidine (His, H)
n = 16 (2.61%)
Lysine (Lys, K)
n = 20 (3.27%)
Arginine (Arg, R)
n = 10 (1.63%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
22 20 17 26 22 32 7 17 14 5 6 8 9 7 19 17
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 1 5 13 27 15 3 3 15 11 4 7 15 4 1 17
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 21 2 15 10 6 3 5 12 7 2 1 5 6 18 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 7 4 1 12 14 6 0 1 6 3 0 0 1 0 13
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
145 159 187 122
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
80 179 113 241
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
58 218 187 150
ND6 (size: 522 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (13.29%)
Alanine (Ala, A)
n = 21 (12.14%)
Serine (Ser, S)
n = 12 (6.94%)
Threonine (Thr, T)
n = 3 (1.73%)
Cysteine (Cys, C)
n = 2 (1.16%)
Valine (Val, V)
n = 25 (14.45%)
Leucine (Leu, L)
n = 34 (19.65%)
Isoleucine (Ile, I)
n = 5 (2.89%)
Methionine (Met, M)
n = 7 (4.05%)
Proline (Pro, P)
n = 5 (2.89%)
Phenylalanine (Phe, F)
n = 6 (3.47%)
Tyrosine (Tyr, Y)
n = 8 (4.62%)
Tryptophan (Trp, W)
n = 7 (4.05%)
Aspartic acid (Asp, D)
n = 2 (1.16%)
Glutamic acid (Glu, E)
n = 8 (4.62%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (1.73%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 0 4 8 3 3 5 8 0 0 11 0 7 7 4 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 1 8 5 3 5 2 2 6 13 3 0 0 2 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 1 0 2 3 4 2 1 0 5 3 4 7 0 1 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 5 3 1 1 0 0 1 0 0 2 0 1 0 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
79 28 18 49
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
37 40 20 77
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
54 21 44 55
Total protein-coding genes (size: 11427 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 242 (6.36%)
Alanine (Ala, A)
n = 355 (9.33%)
Serine (Ser, S)
n = 259 (6.81%)
Threonine (Thr, T)
n = 293 (7.7%)
Cysteine (Cys, C)
n = 26 (0.68%)
Valine (Val, V)
n = 229 (6.02%)
Leucine (Leu, L)
n = 661 (17.37%)
Isoleucine (Ile, I)
n = 249 (6.54%)
Methionine (Met, M)
n = 176 (4.62%)
Proline (Pro, P)
n = 215 (5.65%)
Phenylalanine (Phe, F)
n = 232 (6.1%)
Tyrosine (Tyr, Y)
n = 109 (2.86%)
Tryptophan (Trp, W)
n = 120 (3.15%)
Aspartic acid (Asp, D)
n = 77 (2.02%)
Glutamic acid (Glu, E)
n = 99 (2.6%)
Asparagine (Asn, N)
n = 111 (2.92%)
Glutamine (Gln, Q)
n = 94 (2.47%)
Histidine (His, H)
n = 106 (2.79%)
Lysine (Lys, K)
n = 71 (1.87%)
Arginine (Arg, R)
n = 76 (2.0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
132 117 111 153 149 169 54 107 74 20 61 56 76 36 107 125
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
65 8 18 89 146 99 21 31 92 71 48 66 105 36 8 70
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
88 121 14 60 65 62 11 12 49 45 64 17 29 33 78 35
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
71 72 27 20 57 56 15 10 15 38 13 0 1 4 2 103
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
1002 1016 962 827
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
526 1061 673 1547
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
381 1295 1199 932 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​M​i​c​r​o​m​e​s​i​s​t​i​u​s​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ p​o​u​t​a​s​s​o​u​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.