Scientific name | Panthera leo |
Common name | Lion |
Maximum lifespan | 27.00 years (Panthera leo@AnAge) |
Total mtDNA (size: 16818 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 6879 | 9939 | 4443 | 2436 | 4569 | 5370 |
Base content per 1 kb (bases) | 409 | 591 | 264 | 145 | 272 | 319 |
Base content (%) | 40.9% | 59.1% |
Total protein-coding genes (size: 11339 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 4687 | 6652 | 3179 | 1508 | 3170 | 3482 |
Base content per 1 kb (bases) | 413 | 587 | 280 | 133 | 280 | 307 |
Base content (%) | 41.3% | 58.7% |
Total tRNA-coding genes (size: 1514 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 560 | 954 | 317 | 243 | 428 | 526 |
Base content per 1 kb (bases) | 370 | 630 | 209 | 161 | 283 | 347 |
Base content (%) | 37.0% | 63.0% |
Total rRNA-coding genes (size: 2540 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 1033 | 1507 | 569 | 464 | 587 | 920 |
Base content per 1 kb (bases) | 407 | 593 | 224 | 183 | 231 | 362 |
Base content (%) | 40.7% | 59.3% |
12S rRNA gene (size: 964 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 403 | 561 | 231 | 172 | 216 | 345 |
Base content per 1 kb (bases) | 418 | 582 | 240 | 178 | 224 | 358 |
Base content (%) | 41.8% | 58.2% |
16S rRNA gene (size: 1576 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 630 | 946 | 338 | 292 | 371 | 575 |
Base content per 1 kb (bases) | 400 | 600 | 214 | 185 | 235 | 365 |
Base content (%) | 40.0% | 60.0% |
ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 285 | 396 | 199 | 86 | 198 | 198 |
Base content per 1 kb (bases) | 419 | 581 | 292 | 126 | 291 | 291 |
Base content (%) | 41.9% | 58.1% |
ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 64 | 140 | 50 | 14 | 57 | 83 |
Base content per 1 kb (bases) | 314 | 686 | 245 | 69 | 279 | 407 |
Base content (%) | 31.4% | 68.6% |
COX1 (size: 1554 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 639 | 915 | 356 | 283 | 503 | 412 |
Base content per 1 kb (bases) | 411 | 589 | 229 | 182 | 324 | 265 |
Base content (%) | 41.1% | 58.9% |
COX2 (size: 684 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 280 | 404 | 172 | 108 | 193 | 211 |
Base content per 1 kb (bases) | 409 | 591 | 251 | 158 | 282 | 308 |
Base content (%) | 40.9% | 59.1% |
COX3 (size: 784 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 343 | 441 | 218 | 125 | 230 | 211 |
Base content per 1 kb (bases) | 438 | 563 | 278 | 159 | 293 | 269 |
Base content (%) | 43.8% | 56.3% |
CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 497 | 643 | 337 | 160 | 324 | 319 |
Base content per 1 kb (bases) | 436 | 564 | 296 | 140 | 284 | 280 |
Base content (%) | 43.6% | 56.4% |
ND1 (size: 956 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 415 | 541 | 299 | 116 | 252 | 289 |
Base content per 1 kb (bases) | 434 | 566 | 313 | 121 | 264 | 302 |
Base content (%) | 43.4% | 56.6% |
ND2 (size: 1042 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 407 | 635 | 311 | 96 | 254 | 381 |
Base content per 1 kb (bases) | 391 | 609 | 298 | 92 | 244 | 366 |
Base content (%) | 39.1% | 60.9% |
ND3 (size: 347 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 140 | 207 | 99 | 41 | 98 | 109 |
Base content per 1 kb (bases) | 403 | 597 | 285 | 118 | 282 | 314 |
Base content (%) | 40.3% | 59.7% |
ND4 (size: 1369 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 574 | 795 | 406 | 168 | 363 | 432 |
Base content per 1 kb (bases) | 419 | 581 | 297 | 123 | 265 | 316 |
Base content (%) | 41.9% | 58.1% |
ND4L (size: 297 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 115 | 182 | 74 | 41 | 93 | 89 |
Base content per 1 kb (bases) | 387 | 613 | 249 | 138 | 313 | 300 |
Base content (%) | 38.7% | 61.3% |
ND5 (size: 1821 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 741 | 1080 | 523 | 218 | 512 | 568 |
Base content per 1 kb (bases) | 407 | 593 | 287 | 120 | 281 | 312 |
Base content (%) | 40.7% | 59.3% |
ND6 (size: 528 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 211 | 317 | 153 | 58 | 111 | 206 |
Base content per 1 kb (bases) | 400 | 600 | 290 | 110 | 210 | 390 |
Base content (%) | 40.0% | 60.0% |
ATP6 (size: 681 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
15 | 7 | 7 | 5 | 4 | 13 | 9 | 11 | 9 | 0 | 1 | 6 | 6 | 2 | 7 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 0 | 7 | 8 | 0 | 2 | 2 | 1 | 8 | 0 | 3 | 6 | 4 | 0 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
11 | 7 | 0 | 4 | 1 | 5 | 0 | 0 | 3 | 0 | 2 | 0 | 1 | 5 | 7 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
7 | 3 | 0 | 0 | 1 | 4 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 3 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
47 | 65 | 75 | 40 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
21 | 63 | 40 | 103 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
18 | 71 | 83 | 55 |
ATP8 (size: 204 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: MPQLDTSTWFITIISMIMTLFIMFQLKISKHLYPSSPEPKSTAALKQPNPWEKKWTKIYSPLSLPQQ* | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
5 | 2 | 3 | 1 | 0 | 3 | 0 | 3 | 4 | 1 | 0 | 0 | 0 | 0 | 2 | 1 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 4 | 1 | 3 | 0 | 0 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 3 | 1 | 1 | 0 | 5 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 1 | 1 | 1 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
5 | 18 | 26 | 19 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
4 | 23 | 20 | 21 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
5 | 9 | 37 | 17 |
COX1 (size: 1554 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
25 | 8 | 23 | 9 | 4 | 25 | 6 | 12 | 5 | 1 | 6 | 11 | 16 | 9 | 25 | 17 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
10 | 1 | 0 | 14 | 11 | 15 | 0 | 9 | 11 | 18 | 9 | 14 | 8 | 6 | 1 | 16 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
7 | 13 | 3 | 7 | 5 | 13 | 2 | 1 | 2 | 9 | 10 | 4 | 6 | 13 | 4 | 8 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
10 | 9 | 1 | 8 | 7 | 8 | 1 | 1 | 1 | 6 | 0 | 0 | 0 | 1 | 0 | 13 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
154 | 105 | 134 | 125 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
76 | 135 | 95 | 212 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
53 | 116 | 183 | 166 |
COX2 (size: 684 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
12 | 7 | 8 | 3 | 5 | 14 | 5 | 5 | 6 | 1 | 1 | 4 | 6 | 2 | 4 | 3 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
6 | 0 | 2 | 2 | 3 | 2 | 0 | 4 | 2 | 3 | 0 | 4 | 4 | 5 | 0 | 7 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
3 | 6 | 2 | 3 | 5 | 7 | 0 | 3 | 3 | 8 | 3 | 0 | 2 | 1 | 3 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
6 | 10 | 5 | 5 | 5 | 2 | 3 | 0 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
54 | 60 | 66 | 48 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
28 | 53 | 60 | 87 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
26 | 59 | 85 | 58 |
COX3 (size: 784 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
10 | 5 | 7 | 3 | 6 | 11 | 5 | 7 | 7 | 0 | 5 | 4 | 6 | 1 | 8 | 14 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 1 | 1 | 5 | 6 | 3 | 0 | 5 | 4 | 8 | 3 | 1 | 4 | 6 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
11 | 9 | 1 | 1 | 7 | 7 | 2 | 1 | 4 | 7 | 6 | 3 | 1 | 1 | 5 | 6 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
10 | 8 | 0 | 2 | 1 | 3 | 0 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
61 | 64 | 62 | 74 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
44 | 65 | 56 | 96 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
20 | 89 | 93 | 59 |
CYTB (size: 1140 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
16 | 24 | 9 | 6 | 11 | 24 | 4 | 11 | 5 | 1 | 3 | 5 | 11 | 0 | 8 | 18 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 1 | 3 | 2 | 12 | 8 | 1 | 2 | 10 | 13 | 1 | 5 | 10 | 8 | 1 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 10 | 0 | 3 | 8 | 13 | 0 | 1 | 1 | 7 | 8 | 3 | 2 | 5 | 9 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
8 | 4 | 2 | 5 | 7 | 9 | 0 | 0 | 2 | 6 | 1 | 1 | 0 | 0 | 0 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
86 | 97 | 103 | 94 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
54 | 95 | 75 | 156 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
20 | 145 | 141 | 74 |
ND1 (size: 956 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
8 | 21 | 18 | 7 | 10 | 29 | 4 | 4 | 6 | 0 | 3 | 3 | 7 | 1 | 5 | 15 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 1 | 0 | 7 | 12 | 10 | 0 | 2 | 2 | 6 | 2 | 3 | 10 | 9 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
11 | 14 | 0 | 3 | 7 | 6 | 0 | 2 | 2 | 5 | 8 | 2 | 0 | 2 | 9 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
2 | 9 | 2 | 0 | 3 | 7 | 0 | 1 | 1 | 5 | 1 | 0 | 0 | 0 | 0 | 7 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
69 | 89 | 97 | 63 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
34 | 94 | 54 | 136 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
13 | 116 | 137 | 52 |
ND2 (size: 1042 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
13 | 25 | 40 | 5 | 7 | 31 | 3 | 4 | 7 | 2 | 3 | 1 | 5 | 1 | 4 | 8 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
0 | 0 | 1 | 3 | 9 | 8 | 0 | 0 | 7 | 7 | 0 | 1 | 13 | 5 | 1 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
15 | 21 | 0 | 3 | 9 | 11 | 2 | 0 | 1 | 1 | 9 | 0 | 1 | 2 | 12 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 6 | 1 | 1 | 1 | 14 | 1 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
53 | 84 | 147 | 63 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
31 | 104 | 61 | 151 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
12 | 123 | 173 | 39 |
ND3 (size: 1042 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
13 | 25 | 40 | 5 | 7 | 31 | 3 | 4 | 7 | 2 | 3 | 1 | 5 | 1 | 4 | 8 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
0 | 0 | 1 | 3 | 9 | 8 | 0 | 0 | 7 | 7 | 0 | 1 | 13 | 5 | 1 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
15 | 21 | 0 | 3 | 9 | 11 | 2 | 0 | 1 | 1 | 9 | 0 | 1 | 2 | 12 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 6 | 1 | 1 | 1 | 14 | 1 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
53 | 84 | 147 | 63 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
31 | 104 | 61 | 151 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
12 | 123 | 173 | 39 |
ND4 (size: 1369 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
19 | 22 | 27 | 11 | 18 | 37 | 11 | 13 | 10 | 1 | 0 | 6 | 9 | 1 | 4 | 11 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 2 | 1 | 7 | 18 | 9 | 1 | 2 | 7 | 7 | 2 | 4 | 11 | 6 | 0 | 8 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 21 | 2 | 4 | 6 | 15 | 0 | 2 | 8 | 5 | 12 | 4 | 2 | 6 | 16 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
7 | 6 | 2 | 0 | 3 | 12 | 1 | 0 | 2 | 8 | 0 | 0 | 0 | 0 | 0 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
80 | 128 | 160 | 88 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
54 | 121 | 83 | 198 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
34 | 157 | 189 | 76 |
ND4L (size: 297 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
2 | 3 | 7 | 0 | 3 | 10 | 3 | 5 | 2 | 0 | 1 | 1 | 4 | 1 | 1 | 4 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
6 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 3 | 0 | 0 | 5 | 3 | 0 | 0 | 1 | 2 | 2 | 0 | 0 | 3 | 3 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
20 | 22 | 31 | 26 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
9 | 21 | 18 | 51 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
12 | 31 | 40 | 16 |
ND5 (size: 1821 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
20 | 34 | 35 | 11 | 24 | 35 | 5 | 11 | 17 | 3 | 5 | 6 | 9 | 0 | 19 | 25 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 2 | 2 | 3 | 24 | 15 | 0 | 5 | 5 | 16 | 2 | 5 | 8 | 12 | 1 | 11 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
19 | 16 | 4 | 9 | 14 | 13 | 5 | 5 | 9 | 12 | 8 | 3 | 4 | 10 | 21 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
11 | 8 | 3 | 5 | 5 | 20 | 5 | 1 | 3 | 4 | 1 | 0 | 0 | 1 | 0 | 9 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
111 | 146 | 213 | 137 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
67 | 159 | 134 | 247 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
40 | 218 | 221 | 128 |
ND6 (size: 528 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
13 | 0 | 3 | 2 | 0 | 1 | 2 | 7 | 0 | 0 | 6 | 1 | 4 | 11 | 13 | 1 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 2 | 5 | 1 | 5 | 1 | 14 | 0 | 5 | 5 | 3 | 1 | 0 | 0 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
1 | 3 | 3 | 3 | 1 | 2 | 1 | 3 | 2 | 8 | 1 | 4 | 6 | 3 | 1 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 3 | 6 | 3 | 1 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
71 | 10 | 45 | 50 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
36 | 35 | 31 | 74 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
46 | 13 | 35 | 82 |
Total protein-coding genes (size: 11407 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
163 | 160 | 193 | 66 | 96 | 247 | 59 | 96 | 81 | 10 | 34 | 48 | 85 | 29 | 104 | 126 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
50 | 10 | 14 | 59 | 111 | 83 | 6 | 46 | 51 | 95 | 24 | 49 | 81 | 65 | 4 | 66 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
103 | 131 | 16 | 42 | 71 | 101 | 13 | 19 | 38 | 66 | 72 | 24 | 25 | 54 | 92 | 31 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
66 | 73 | 25 | 31 | 36 | 90 | 15 | 6 | 14 | 43 | 4 | 1 | 0 | 7 | 0 | 80 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
836 | 922 | 1191 | 851 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
469 | 1001 | 749 | 1581 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
304 | 1179 | 1471 | 846 |
F a i l e d t o u n d e r s t a n d i d : ? t e r m = ( " P a n t h e r a l e o " [ O r g a n i s m ] ) A N D ( r e f s e q [ f i l t e r ] A N D m i t o c h o n d r i o n [ f i l t e r ] )