Viewing data for Hexaprotodon liberiensis


Scientific name Hexaprotodon liberiensis
Common name Pygmy hippopotamus
Maximum lifespan 42.30 years (Hexaprotodon liberiensis@AnAge)

Total mtDNA (size: 16396 bases) GC AT G C A T
Base content (bases) 6898 9497 4635 2263 4101 5396
Base content per 1 kb (bases) 421 579 283 138 250 329
Base content (%) 42.1% 57.9%
Total protein-coding genes (size: 11350 bases) GC AT G C A T
Base content (bases) 4846 6503 3451 1395 2858 3645
Base content per 1 kb (bases) 427 573 304 123 252 321
Base content (%) 42.7% 57.3%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1511 bases) GC AT G C A T
Base content (bases) 603 908 351 252 398 510
Base content per 1 kb (bases) 399 601 232 167 263 338
Base content (%) 39.9% 60.1%
Total rRNA-coding genes (size: 2532 bases) GC AT G C A T
Base content (bases) 1015 1517 580 435 562 955
Base content per 1 kb (bases) 401 599 229 172 222 377
Base content (%) 40.1% 59.9%
12S rRNA gene (size: 967 bases) GC AT G C A T
Base content (bases) 401 566 235 166 200 366
Base content per 1 kb (bases) 415 585 243 172 207 378
Base content (%) 41.5% 58.5%
16S rRNA gene (size: 1565 bases) GC AT G C A T
Base content (bases) 614 951 345 269 362 589
Base content per 1 kb (bases) 392 608 220 172 231 376
Base content (%) 39.2% 60.8%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 292 389 213 79 169 220
Base content per 1 kb (bases) 429 571 313 116 248 323
Base content (%) 42.9% 57.1%
ATP8 (size: 207 bases) GC AT G C A T
Base content (bases) 80 127 67 13 50 77
Base content per 1 kb (bases) 386 614 324 63 242 372
Base content (%) 38.6% 61.4%
COX1 (size: 1557 bases) GC AT G C A T
Base content (bases) 681 875 422 259 435 440
Base content per 1 kb (bases) 437 562 271 166 279 283
Base content (%) 43.7% 56.2%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 285 399 188 97 170 229
Base content per 1 kb (bases) 417 583 275 142 249 335
Base content (%) 41.7% 58.3%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 359 425 235 124 213 212
Base content per 1 kb (bases) 458 542 300 158 272 270
Base content (%) 45.8% 54.2%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 517 623 363 154 279 344
Base content per 1 kb (bases) 454 546 318 135 245 302
Base content (%) 45.4% 54.6%
ND1 (size: 956 bases) GC AT G C A T
Base content (bases) 416 540 306 110 234 306
Base content per 1 kb (bases) 435 565 320 115 245 320
Base content (%) 43.5% 56.5%
ND2 (size: 1042 bases) GC AT G C A T
Base content (bases) 408 634 318 90 258 376
Base content per 1 kb (bases) 392 608 305 86 248 361
Base content (%) 39.2% 60.8%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 150 196 107 43 89 107
Base content per 1 kb (bases) 434 566 309 124 257 309
Base content (%) 43.4% 56.6%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 587 791 433 154 350 441
Base content per 1 kb (bases) 426 574 314 112 254 320
Base content (%) 42.6% 57.4%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 107 190 70 37 93 97
Base content per 1 kb (bases) 360 640 236 125 313 327
Base content (%) 36.0% 64.0%
ND5 (size: 1821 bases) GC AT G C A T
Base content (bases) 767 1054 568 199 453 601
Base content per 1 kb (bases) 421 579 312 109 249 330
Base content (%) 42.1% 57.9%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 222 306 180 42 86 220
Base content per 1 kb (bases) 420 580 341 80 163 417
Base content (%) 42.0% 58.0%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%)
Alanine (Ala, A)
n = 18 (7.96%)
Serine (Ser, S)
n = 12 (5.31%)
Threonine (Thr, T)
n = 24 (10.62%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 9 (3.98%)
Leucine (Leu, L)
n = 41 (18.14%)
Isoleucine (Ile, I)
n = 24 (10.62%)
Methionine (Met, M)
n = 18 (7.96%)
Proline (Pro, P)
n = 13 (5.75%)
Phenylalanine (Phe, F)
n = 12 (5.31%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 11 (4.87%)
Glutamine (Gln, Q)
n = 9 (3.98%)
Histidine (His, H)
n = 7 (3.1%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 4 (1.77%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 16 13 3 6 20 3 8 8 1 1 3 4 1 4 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 0 0 10 7 1 0 5 5 1 2 7 4 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 14 0 2 2 4 0 2 2 0 2 1 1 2 9 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 2 1 1 0 4 0 2 1 1 0 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
42 65 85 35
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 63 38 104
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 85 97 30
ATP8 (size: 207 bases)
Amino acid sequence: MPQLDTSTWFTTILSMFLTLFVIFQLKISKHTYHPNPGTTLPMTQKQLTPWETKWTKIYSPLSLPLQY*
Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.47%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 5 (7.35%)
Threonine (Thr, T)
n = 12 (17.65%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.47%)
Leucine (Leu, L)
n = 10 (14.71%)
Isoleucine (Ile, I)
n = 4 (5.88%)
Methionine (Met, M)
n = 3 (4.41%)
Proline (Pro, P)
n = 7 (10.29%)
Phenylalanine (Phe, F)
n = 4 (5.88%)
Tyrosine (Tyr, Y)
n = 3 (4.41%)
Tryptophan (Trp, W)
n = 3 (4.41%)
Aspartic acid (Asp, D)
n = 1 (1.47%)
Glutamic acid (Glu, E)
n = 1 (1.47%)
Asparagine (Asn, N)
n = 1 (1.47%)
Glutamine (Gln, Q)
n = 5 (7.35%)
Histidine (His, H)
n = 2 (2.94%)
Lysine (Lys, K)
n = 5 (7.35%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
0 4 2 1 2 5 1 1 4 1 0 1 0 0 4 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 0 0 0 0 0 1 0 2 2 3 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 4 1 0 1 4 0 0 0 1 2 0 0 0 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 1 0 0 1 5 0 0 0 0 0 0 0 0 1 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
4 23 25 17
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
4 24 19 22
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 20 33 11
COX1 (size: 1557 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.07%)
Alanine (Ala, A)
n = 41 (7.92%)
Serine (Ser, S)
n = 31 (5.98%)
Threonine (Thr, T)
n = 38 (7.34%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 41 (7.92%)
Leucine (Leu, L)
n = 61 (11.78%)
Isoleucine (Ile, I)
n = 35 (6.76%)
Methionine (Met, M)
n = 31 (5.98%)
Proline (Pro, P)
n = 28 (5.41%)
Phenylalanine (Phe, F)
n = 42 (8.11%)
Tyrosine (Tyr, Y)
n = 19 (3.67%)
Tryptophan (Trp, W)
n = 17 (3.28%)
Aspartic acid (Asp, D)
n = 16 (3.09%)
Glutamic acid (Glu, E)
n = 9 (1.74%)
Asparagine (Asn, N)
n = 20 (3.86%)
Glutamine (Gln, Q)
n = 7 (1.35%)
Histidine (His, H)
n = 17 (3.28%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.54%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 19 25 6 7 34 3 11 7 0 6 10 21 4 15 27
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 1 8 19 13 1 10 12 21 4 9 10 9 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 20 2 2 16 8 1 0 4 10 8 2 0 7 13 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 7 2 4 12 7 2 1 1 6 0 1 0 0 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
154 110 138 116
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
78 134 96 210
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
27 178 205 108
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 7 (3.08%)
Serine (Ser, S)
n = 17 (7.49%)
Threonine (Thr, T)
n = 21 (9.25%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 16 (7.05%)
Leucine (Leu, L)
n = 37 (16.3%)
Isoleucine (Ile, I)
n = 16 (7.05%)
Methionine (Met, M)
n = 12 (5.29%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 12 (5.29%)
Glutamic acid (Glu, E)
n = 12 (5.29%)
Asparagine (Asn, N)
n = 8 (3.52%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 10 9 3 2 21 7 4 6 1 1 6 8 1 4 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 1 0 3 3 1 2 2 4 0 0 6 7 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 11 0 3 5 5 1 1 2 4 6 0 0 1 7 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 9 3 6 6 5 0 0 0 6 0 0 0 0 1 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
55 65 65 43
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 55 61 88
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 68 103 39
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 21 (8.08%)
Threonine (Thr, T)
n = 25 (9.62%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 18 (6.92%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 6 (2.31%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 6 6 3 5 20 3 2 7 1 3 4 9 2 10 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 2 11 1 0 2 11 7 0 2 4 5 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 11 1 1 6 9 0 1 4 3 8 2 0 1 5 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 3 5 2 2 3 0 1 1 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 70 61 66
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 66 55 96
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 99 96 50
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.6%)
Alanine (Ala, A)
n = 27 (7.12%)
Serine (Ser, S)
n = 21 (5.54%)
Threonine (Thr, T)
n = 27 (7.12%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 16 (4.22%)
Leucine (Leu, L)
n = 63 (16.62%)
Isoleucine (Ile, I)
n = 40 (10.55%)
Methionine (Met, M)
n = 13 (3.43%)
Proline (Pro, P)
n = 24 (6.33%)
Phenylalanine (Phe, F)
n = 23 (6.07%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 12 (3.17%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 15 (3.96%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 31 11 6 15 29 5 7 5 1 2 4 10 0 9 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 4 2 12 13 0 1 10 10 4 1 9 14 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 18 0 2 6 9 1 0 3 4 11 1 1 2 13 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 6 0 3 9 10 0 1 2 5 0 1 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
86 105 109 80
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 96 76 155
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 162 159 44
ND1 (size: 956 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 27 (8.52%)
Serine (Ser, S)
n = 24 (7.57%)
Threonine (Thr, T)
n = 24 (7.57%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 12 (3.79%)
Leucine (Leu, L)
n = 55 (17.35%)
Isoleucine (Ile, I)
n = 27 (8.52%)
Methionine (Met, M)
n = 21 (6.62%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 20 (6.31%)
Tyrosine (Tyr, Y)
n = 13 (4.1%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 12 (3.79%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 3 (0.95%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 22 18 1 14 31 4 5 6 0 1 3 7 1 5 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 0 2 11 14 0 0 6 3 3 3 7 12 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 15 0 3 10 8 0 0 3 3 10 0 0 3 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 11 0 0 3 8 0 0 0 7 1 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
65 89 95 69
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 94 56 135
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 123 154 29
ND2 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 17 (4.91%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 46 (13.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.89%)
Leucine (Leu, L)
n = 55 (15.9%)
Isoleucine (Ile, I)
n = 36 (10.4%)
Methionine (Met, M)
n = 37 (10.69%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 16 (4.62%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 25 34 6 12 27 4 4 8 1 1 4 5 0 2 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 2 8 7 0 1 4 8 1 4 7 10 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 23 1 4 10 10 0 0 2 2 8 1 2 3 13 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 5 0 0 2 13 0 0 0 3 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 87 150 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 108 60 150
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 123 166 45
ND3 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 17 (4.91%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 46 (13.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.89%)
Leucine (Leu, L)
n = 55 (15.9%)
Isoleucine (Ile, I)
n = 36 (10.4%)
Methionine (Met, M)
n = 37 (10.69%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 16 (4.62%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 25 34 6 12 27 4 4 8 1 1 4 5 0 2 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 2 8 7 0 1 4 8 1 4 7 10 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 23 1 4 10 10 0 0 2 2 8 1 2 3 13 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 5 0 0 2 13 0 0 0 3 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 87 150 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 108 60 150
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 123 166 45
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 31 (6.77%)
Serine (Ser, S)
n = 36 (7.86%)
Threonine (Thr, T)
n = 42 (9.17%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 12 (2.62%)
Leucine (Leu, L)
n = 91 (19.87%)
Isoleucine (Ile, I)
n = 43 (9.39%)
Methionine (Met, M)
n = 35 (7.64%)
Proline (Pro, P)
n = 24 (5.24%)
Phenylalanine (Phe, F)
n = 19 (4.15%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 23 (5.02%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 29 29 9 16 48 8 9 11 0 1 4 6 1 7 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 2 5 13 11 2 1 7 6 3 3 12 8 1 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 21 1 4 10 12 0 0 10 4 11 0 1 4 19 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 6 3 0 3 8 3 1 3 6 0 0 0 0 0 13
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
72 137 164 86
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 123 83 200
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
29 173 194 63
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 5 (5.1%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 7 (7.14%)
Methionine (Met, M)
n = 11 (11.22%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 4 9 2 2 10 2 6 2 0 0 1 4 1 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 2 1 6 0 1 0 3 0 0 0 1 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 2 0 1 2 5 0 0 1 3 1 0 0 3 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 2 0 0 1 0 0 0 0 0 1 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
22 22 29 26
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 23 17 50
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 25 51 17
ND5 (size: 1821 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.62%)
Alanine (Ala, A)
n = 45 (7.43%)
Serine (Ser, S)
n = 47 (7.76%)
Threonine (Thr, T)
n = 60 (9.9%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 18 (2.97%)
Leucine (Leu, L)
n = 89 (14.69%)
Isoleucine (Ile, I)
n = 54 (8.91%)
Methionine (Met, M)
n = 36 (5.94%)
Proline (Pro, P)
n = 29 (4.79%)
Phenylalanine (Phe, F)
n = 47 (7.76%)
Tyrosine (Tyr, Y)
n = 16 (2.64%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 11 (1.82%)
Glutamic acid (Glu, E)
n = 10 (1.65%)
Asparagine (Asn, N)
n = 36 (5.94%)
Glutamine (Gln, Q)
n = 16 (2.64%)
Histidine (His, H)
n = 16 (2.64%)
Lysine (Lys, K)
n = 23 (3.8%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 35 31 10 23 45 3 7 15 1 1 7 9 1 13 34
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 3 3 17 21 4 2 9 14 3 5 14 10 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 37 0 5 13 16 2 3 8 5 11 1 1 10 26 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 8 2 1 10 23 0 1 4 4 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
112 151 220 124
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
64 170 129 244
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
23 247 252 85
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 27 (15.43%)
Alanine (Ala, A)
n = 9 (5.14%)
Serine (Ser, S)
n = 14 (8.0%)
Threonine (Thr, T)
n = 6 (3.43%)
Cysteine (Cys, C)
n = 1 (0.57%)
Valine (Val, V)
n = 31 (17.71%)
Leucine (Leu, L)
n = 21 (12.0%)
Isoleucine (Ile, I)
n = 7 (4.0%)
Methionine (Met, M)
n = 10 (5.71%)
Proline (Pro, P)
n = 3 (1.71%)
Phenylalanine (Phe, F)
n = 15 (8.57%)
Tyrosine (Tyr, Y)
n = 9 (5.14%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 2 (1.14%)
Glutamic acid (Glu, E)
n = 8 (4.57%)
Asparagine (Asn, N)
n = 2 (1.14%)
Glutamine (Gln, Q)
n = 1 (0.57%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 4 (2.29%)
Arginine (Arg, R)
n = 1 (0.57%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 0 1 2 0 0 3 6 0 1 13 4 4 10 15 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
9 1 0 5 0 2 2 14 2 1 10 1 1 0 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 1 3 3 0 2 1 8 0 8 1 1 10 2 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 7 2 0 0 4 1 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
77 10 37 52
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
41 24 27 84
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
62 8 22 84
Total protein-coding genes (size: 11421 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 217 (5.7%)
Alanine (Ala, A)
n = 257 (6.76%)
Serine (Ser, S)
n = 269 (7.07%)
Threonine (Thr, T)
n = 342 (8.99%)
Cysteine (Cys, C)
n = 22 (0.58%)
Valine (Val, V)
n = 192 (5.05%)
Leucine (Leu, L)
n = 604 (15.88%)
Isoleucine (Ile, I)
n = 314 (8.25%)
Methionine (Met, M)
n = 241 (6.34%)
Proline (Pro, P)
n = 202 (5.31%)
Phenylalanine (Phe, F)
n = 235 (6.18%)
Tyrosine (Tyr, Y)
n = 130 (3.42%)
Tryptophan (Trp, W)
n = 104 (2.73%)
Aspartic acid (Asp, D)
n = 70 (1.84%)
Glutamic acid (Glu, E)
n = 90 (2.37%)
Asparagine (Asn, N)
n = 159 (4.18%)
Glutamine (Gln, Q)
n = 90 (2.37%)
Histidine (His, H)
n = 96 (2.52%)
Lysine (Lys, K)
n = 99 (2.6%)
Arginine (Arg, R)
n = 64 (1.68%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
108 206 193 57 109 301 48 72 82 8 30 52 88 22 91 144
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
48 7 15 31 112 103 11 34 68 85 30 35 80 85 2 46
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
105 182 9 32 81 94 6 15 41 48 81 11 17 41 118 21
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
75 67 23 19 51 90 9 8 13 41 2 2 0 4 2 93
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
826 967 1213 798
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
465 1014 739 1586
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
248 1351 1582 623

>NC_020697.1 Hexaprotodon liberiensis isolate CYTO mitochondrion, complete genome
GTTAACGTAGCTCAAACACCCAAAGCGAGGCACTGAAAATGCCTAGATGGGCTCGCCTAGCCCCGTAAAC
ACACAGGTTTGGTCCCAGCCTTTCTGTTAATTTTTAATAGAATTACACATGCAAGTATCCACATCCCAGT
GAGAATGCCCTCTAAATCACCCAGATTAAAAGGAGCGGGCATCAAGCACACCATACACCGTAGCTCAAAA
CGCCCTGCTCAGCCACACCCCCACGGGAAACAGCAGTGACCAAAATTAAGCCATGAACGAAAGTTTGACT
AAGCCATATTAATCAGAGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTGACTCGAACTAACA
GAAATACGGCGTAAAGCGTGTTAAAGAATTAAAGTACAAATAAAGTTAAATTCTAACTAAACTGTAAAAA
GCCCTAACTAGAATAAAAATACACTACAAAAGTGACTTTAATAATACTGACCACACGATAGCTAAGACCC
AAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACACAGATAATTCCAAAAACAGAACTATTCGCC
AGAGTACTACTAGCAATAGCTTAAAACTCAAAGGACTTGGCGGTGCTTCATACCCCTCTAGAGGAGCCTG
TTCTATAATCGATAAACCCCGATAAACCTCACCAACCCTTGCTAATCCAGTCTATATACCGCCATCTCCA
GCAAACCCTAAAAAGGACTAAAAGTAAGCTCAACTATCACACATAAAGACGTTAGGTCAAGGTGTAACCT
ATGGGCTGGGAAGAAATGGGCTACATTTTCTAGAACAAGAATACAACCCACCTGAACGAAAACTCCTATG
AAAACTAGGAACTAAAGGAGGATTTAGTAGTAAATCAAGAGTAGAGTGCTTGATTGAACAAGGCCATGAA
GCACGCACACACCGCCCGTCACCCTCCTCAAACAACACAAACCCATAAACATAATAACTATACAAAACCA
AATGAGAGGAGACAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGACAAATCAAAGCATAGCT
TAGACCCAAAGCATCTAGTTTACACCTAGAAGATTTCACAATAAGTGAATGCCTTGAACCAAAGCTAGCC
CAACTACCCCACCCCACTATAAGTAAAACAAAGCATTTAACCATCAACTTAAAGTATAGGAGATAGAAAT
CTGAGACTATTAGGCGCAATAGAGATAGTACCGTAAGGGAATGATGAAAGAAGCAACAAAAGTATCAAAA
AGCAAAGATCACACCTTGTACCTTTCGCATAATGATTTAACTAGCAAAACCTTAGCAAAGAGAACTTAAG
CTAAGCCACCCGAAACCAGACGAGCTACTTATGGACAGTTTACCAGAACAAACTCATCTATGTGGCAAAA
TAGTGAAAAGATTCATAAGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTGTCCAGAAAAAG
AATCTCAGTTCAATTTTAAAATTACCAAAAGCCCAAATCAAGCCTAATGTAATTTTAAAATTTAGTCTAA
AAAGGTACAGCTTTTTAGACAAAGGATACAACCTTGACTAGTGAGTAAATTCAAACAACACCATAGTTGG
CCTAAAAGCAGCCATCAATTAAGATAGCGTTCAAGCTCAACAATAAGCACAACCTAATCCCCATAACAAG
CAAACAACTCCTAGCCTAACTACTGGACTATTCTATTCAAACATAGAAGCAATACTGTTAATATGAGTAA
CAAGAAACAATTCTCCCAGCACAAGCCTATGTCAGTAGCTGATAATATACTGACAGTTAACAACAAGTAA
ATATAACCTAACACTAAAACATTTACCCCATACACTGTTAACCCAACACAGGCGTGCACCCAAGGAAAGA
TTAAAAAAAGCAAAAGGAACTCGGCAAACACAAACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATC
ACTAGTATTAGAGGCACTGCCTGCCCAGTGACAATCTGTTAAACGGCCGCGGTATCCTGACCGTGCAAAG
GTAGCATAATCATTTGTTCCTTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTG
CTTTCAATCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATAATGCAATAAGACGAGAAGACCCTGTG
GAGCTTCAATTAACTGACTCAATAAAAACAAAATAGACCCGCAAGGCACAATAAAATCCTATGTGAGTCA
GTAATTTTGGTTGGGGTGACCTCGGAGAAAAAAAAATCCTCCGAGTGATAAAATCTAGACTCACCAGTCA
AAATATAACATCACTCATTGACCCAAAATCTTTGATCAACGGAACAAGTTACCCCAGGGATAACAGCGCA
ATCCTATTCTAGAGTCCATATCGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGT
GCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAA
TCCAGGTCAGTTTCTATCTATTATACATTTCTCCCAGTACGAAAGGACAAGAGAAATGAGGCCTACTTCT
AATAAGCGCCTTAAAACTAATTAATGACATAATCTTAACTTAATTAAATAGTATAAACATATCAGCCCTA
GACCAGGGCACAGTTGCGATGGCAGAGCCCGGTAATTGCATAAAACTTAAGCCTTTACATCAGAGGTTCA
AATCCTCTTCACAACAAAATGTTTATCCTCAACACCCTCATACTTATCGCACCTATTCTCCTAGCCATAG
CATTCCTAACATTAGTCGAACGAAAAATCCTAGGGTACATACAACTCCGAAAAGGCCCAAACGTTGTAGG
ACCATACGGCCTGCTACAACCTTTCGCCGACGCAATCAAACTCTTCACAAAAGAACCCCTACGACCATCC
ACCTCCTCTATCTCCATATTTATCATTGCACCAATCCTAGCTCTAACCCTAGCCCTAACAATATGAATCC
CCCTACCCATGCCATACCCCCTCGTCAACATAAACCTAGGCGTACTATTTATACTAGCCATATCTAGCCT
AGCCGTGTACTCCATCCTATGATCCGGGTGAGCCTCCAACTCAAAATATGCACTAATTGGCGCCTTACGA
GCAGTAGCACAAACAATCTCATATGAAGTAACCCTGGCAATCATCCTCCTATCTATCCTCCTAATAAATG
GATCCTTCACATTATCAACCCTCATCACAACACAAGAAAAACTATGACTAATCTTTCCCTCATGACCACT
AGCCATAATGTGATTCATCTCAACCCTAGCAGAAACCAACCGGGCCCCATTCGACCTCACAGAAGGAGAA
TCCGAACTCGTATCAGGCTTCAACGTAGAATATGCAGCAGGGCCATTCGCTATATTCTTCATAGCAGAAT
ACATTAACATCATTATAATAAATGCCTTCACAACAATCCTATTCCTAGGCGCATACCATAACCCATACTT
ACCAGAACTCTACACAATCAATTTTACCGTCAAAACATTACTACTAACAATATCCTTCCTATGAATCCGA
GCATCCTACCCACGATTCCGATACGACCAACTAATACACCTCCTATGAAAAAGCTTCCTACCACTGACTC
TAGCCCTGTGTATATGACACGTATCACTCCCCATCATAACATCAAGCATCCCCCCTCAAACATAAGAAAT
ATGTCTGACAAAAGAATTACTTTGATAGAGTAAATAATAGAGGTTTAAGCCCTCTTATTTCTAGAACTAT
AGGAATCGAACCTACTCCTGAGAATTCAAAATTCCCTGTGCTACCAATCACACCCTGTTCCATAGTAAGG
TCAGCTAAACAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTAAATCCTTCCCGTACTAATAAACCC
CTTCATCTCTATCATTATCTACACAACCATCATCCTAGGGACTATAATTGTAATAACTAGCTCTCACTGA
CTATTAACTTGAACCGGATTCGAAATAAATATGCTAGCTATTATCCCCGTCATAATGAAATCACCCAACC
CACGAGCCACAGAAGCCTCCGTTAAATATTTCATAACACAAGCCACCGCCTCCATACTACTTATATTAGC
AGTCATTATCAACCTACTGTACTCCGGACAATGGACAGTCATAAAATTACTTAATCCAACAGCATCCATA
ATTATAACAATAGCCCTTGCTATAAAACTAGGACTATCCCCTTTCCACTTCTGAGTCCCTGAAGTAACAC
AGGGTATCCCCTTGACAGCAGGCCTAATCTTGCTAACATGACAAAAACTCGCACCCCTATCCATTCTTTA
CCAAATCTCCCCATCAATCAACCCAAACCTAATCCTAACTATATCAATACTATCAATCCTAATCGGCGGA
TGAGGCGGACTAAACCAAACTCAACTACGAAAAATCATAGCATACTCATCTATTGCCCACATAGGATGAA
TAACGGCCATCCTAATCTACAACCCAACCATAACCATTCTAAACCTGACAATTTATCTCATAACAACCTT
CACAATATTTACAATATTTACACTCAACTCAACCACCACTACCCTCTCCTTATCACACACATGAAACAAA
ACTCCTATCATTACAACCCTTATACTCACTATCCTGCTATCAATAGGAGGACTACCACCACTAACAGGCT
TCGTACCAAAATGAATGATCATCCAAGAAATAACAAAAAATGACAGCATTATCCTACCCACACTAATAGC
CATCATAGCACTCCTTAACCTATACTTCTACATACGACTCACTTACTCTACAGCACTAACCATATTCCCT
TCCTCAAACAACATAAAAATAAAATGACAATTCGAAACCTCAAAACACAAAACACTCCTGCCAACAATAA
TCATCCTCTCCACCATACTCCTCCCCCTCACACCAATACTAGTAGTACTAGACTAGAGGTTTAGGTTACC
CAGACCAAGAGCCTTCAAAGCTCTAAGCAAGTATATATTACTTAACCCCTGCTCAATAGAGACTGCAAGA
TCACGCCTCACATCAATTGAATGCAACTCAACTGCTTTTATTAAGCTAAGTCCCCACTAGATTGGTGGGA
CATGCTCCCCACGAACTTTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCTCCCGC
CGCAGGGAAAAAAAGGCGGGAGAAGCCCCGGCAGAATTGAAGCTGCTTCTTTGAATTTGCAATTCAATAT
GAATATTTCACTACAGGACCTGGTAAAAAGAGGACTCAACCCCTGTACTTAGATTTACAGTCTAATGCTT
ACTCAGCCATTTTACCCATGTTCATAAACCGCTGACTATTCTCAACTAACCACAAAGACATCGGTACATT
ATATCTACTATTCGGTGCCTGAGCTGGCATAGCAGGCACTGCCCTAAGCCTACTAATCCGTGCCGAACTA
GGCCAACCTGGTACACTACTAGGAGATGACCAAATTTATAACGTAGTCGTCACAGCTCACGCATTTGTAA
TAATTTTCTTTATAGTAATACCAATTATAATCGGCGGGTTCGGAAACTGACTTGTTCCACTAATAATCGG
AGCCCCTGATATAGCCTTTCCTCGAATAAATAACATAAGCTTCTGACTACTTCCCCCCTCTTTCCTACTA
TTATTAGCATCCTCCATAGTAGAAGCAGGAGCAGGAACAGGCTGGACCGTCTATCCCCCTTTAGCTGGAA
ATTTAGCCCATGCTGGAGCCTCCGTAGACCTTACAATTTTCTCCCTCCACCTGGCCGGAGTTTCCTCTAT
TCTAGGTGCAATCAATTTCATTACAACCATCATTAACATAAAACCACCCGCCATATCCCAATATCAAACC
CCACTGTTCGTCTGATCAGTTCTAATCACAGCCGTACTACTTCTACTCTCCCTACCCGTTCTAGCAGCAG
GTATTACTATGCTACTTACAGACCGAAACCTAAATACCACCTTCTTTGACCCTGCGGGAGGAGGTGACCC
TGTCCTTTATCAACACTTATTCTGATTCTTCGGACACCCCGAAGTATACATCCTCATCCTCCCCGGCTTC
GGAATGATCTCACACATTGTAACCTATTACTCCGGAAAAAAAGAACCCTTTGGATACATAGGCATGGTTT
GAGCCATGATATCCATCGGATTCCTAGGATTTATTGTATGGGCCCATCACATATTTACAGTAGGTATAGA
TGTGGACACCCGAGCATACTTTACATCCGCCACTATAATTATTGCCATCCCCACAGGAGTAAAAGTATTT
AGCTGATTAGCAACACTACATGGAGGGAACATCAAGTGATCCCCTGCTATGATATGAGCCCTAGGCTTTA
TTTTCCTATTCACAGTGGGTGGCCTAACAGGTATTGTTTTAGCCAACTCATCCCTAGACATCGTCCTCCA
TGACACCTATTACGTAGTAGCCCACTTCCATTATGTACTCTCAATAGGCGCCGTCTTCGCTATCATAGGA
GGCTTCGTACACTGATTCCCACTATTTTCGGGGTATACACTCAATGACACATGAGCAAAAATCCACTTCG
TAATTATATTCGTGGGGGTCAATCTAACTTTCTTCCCACAACATTTCTTAGGTCTATCCGGAATACCTCG
ACGATACTCCGACTACCCAGACGCCTATACAACATGAAATACTATCTCCTCAATAGGCTCATTTATCTCA
CTGACAGCTGTAGTACTAATAGTATTTATCATTTGAGAGGCATTTGTCTCCAAACGAGAAGTCTTAGCTG
TAGATCTAACTACGACGAACCTAGAGTGACTAAACGGATGCCCTCCACCATACCACACATTTGAAGAACC
CGCATAYGTGAGCTTAACTAACCAAAACAAGAGAGGAAGGAATCGAACCTCCTCCTGTTGGTTTCAAGCC
AACATCATAACCACTATGTCTCTCTCCATAAACGAGGTATTAGTAAAATTTACATGACTTCGTCAAAGTT
AAGTTATAGGTGAAAATCCTGTATATCTCCATGGCATATCCCCTCCAATTAGGCTTTCAAGATGCAGTAT
CACCCATTATAGAAGAACTACTGTACTTTCATGACCACACACTAATGATCGTATTCCTAATCAGCTCACT
AGTCCTTTACATTATCACACTAATACTGACTACCAAACTAACCCACACAAACACCATAAATGCACAAGAA
GTAGAGACTGTCTGAACAATCCTGCCAGCCATCATCCTTATCCTAATTGCGCTACCATCTCTGCGAATCC
TCTACATAATAGACGAAATTAACAACCCCTCTCTAACCGTAAAAACTATAGGTCATCAATGATATTGAAG
TTATGAGTACACAGATTATGAGGACCTTAACTTTGACTCCTACATAGTCCCAACATCAGATCTAAAACCA
GGAGATCTACGACTGCTAGAAGTAGATAACCGAGTCGTCCTACCCGTGGACTTAACAGTTCGAATACTAA
TCTCGTCAGAAGACGTACTACACTCTTGAGCCGTACCATCCCTAGGTCTAAAAACAGATGCCATTCCAGG
ACGACTGAACCAAACAACCTTAATATCAACACGACCCGGACTATTTTACGGACAGTGCTCCGAAATCTGT
GGCTCCAACCATAGCTTCATGCCCATTGTCTTAGAACTAGTACCACTGCAAACTTTCGAAAAATGAACCA
CATCCCTACTATAGACTCATTAAGAAGCTAGTAGCGCTAACCTTTTAAGTTAGAGACTGAGAGCTAAACT
CTCCTTAATGACATGCCACAACTAGACACATCAACATGATTTACCACCATCCTATCCATATTTCTGACCC
TATTTGTCATCTTTCAACTAAAAATCTCAAAACACACTTACCACCCAAACCCAGGAACTACTCTCCCTAT
AACACAAAAACAGCTCACCCCCTGAGAAACAAAATGAACGAAAATCTATTCACCTCTTTCATTACCCCTA
CAATACTAGGCCTACCCCTAGCCGCCATAATCATTATATTTCCAAGCATACTATTCCCAGCACCTACCCG
TCTAATTACTAACCGCTTAATCTCCATTCAACAATGACTAATCCAACTCGTATCAAAACAAATAATGAAC
ATCCACAACCACAAAGGACAAACTTGAACACTAATGTTAATATCCCTTATCCTATTCATCGGCTCAACAA
ATCTCTTAGGACTTCTCCCACACTCATTCACACCCACCACACAACTCTCAATGAACTTAGGCATAGCCAT
CCCCTTATGGGCAGGCACCGTAATCATAGGCTTCCGTAACAAAACAAAAATCTCTTTGGCCCACTTTCTA
CCCCAAGGAACACCCACACCCCTAATCCCCATACTGGTAATCATTGAGACAATTAGCCTATTTATTCAAC
CAATAGCACTAGCCGTGCGACTAACAGCAAACATCACAGCAGGACACCTACTAATGCACTTAATCGGAGG
GGCAACCCTCGCATTAATAAACATCAGTATAGCCACTGCCCTTGTCACATTCATCATCCTAGTCCTGCTG
ACAGCCCTAGAATTTGCCGTTGCCATAATTCAGGCGTACGTCTTCACCCTACTAGTAAGTCTCTACTTAC
ACGATAACACATAATGACCCACCAAACCCACGCATATCATATAGTAAACCCAAGCCCCTGACCTCTTACA
GGAGCCCTCTCAGCCCTACTAATAACATCAGGCCTAACCATATGATTCCACTTTAACTCCCTTATTCTAC
TAACAACAGGACTAATTACTAACACTCTAACAATGTACCAATGATGACGAGATGTAATCCGAGAGAGCAC
CTTTCAAGGCCACCACACACCAGTCGTACAAAAAGGACTCCGCTACGGAATAGTCCTATTTATTATCTCC
GAAGTCCTATTTTTCTCAGGCTTCTTCTGGGCCTTTTATCACTCAAGCCTCGCCCCCACTCCTGAGCTAG
GCGGATGTTGACCACCCACAGGCATCAGCCCCTTAAACCCACTAGAAGTGCCACTCCTGAACACCTCCGT
TCTGCTAGCCTCCGGTGTCTCCATTACCTGGGCTCACCACAGTTTAATAGAAGGCAATCGAAAACAAATA
CTTCAGGCCCTATTTATCACAATCACCCTAGGTGTATACTTCACACTACTACAAGCCTCAGAGTACTATG
AGGCCTCTTTTACAATTTCAGACGGAGTTTACGGCTCAACTTTCTTTGTAGCTACGGGCTTTCATGGACT
GCATGTAATTATTGGCACTACTTTCCTAATCGTATGCTTCCTACGTCAACTAAAATTCCACTTCACATCA
GACCACCATTTTGGCTTCGAGGCCGCCGCCTGATACTGACACTTCGTAGATGTAGTTTGACTATTCCTCT
ACGTGTCCATTTACTGATGAGGCTCATAGTTCTTTTAGTATTAAAACAGTACAGCTGACTTCCAATCAGC
TAGCCTCAGTGCACTCTGGGAGAGAACAATTAACCTAATAATAGCACTACTGACAAATACCGCACTAGCC
TCTCTATTGGTCCTTATTGCCTTCTGACTCCCACAACTAAATACCTACGCAGAAAAAACAAGCCCCTATG
AATGCGGATTTGACCCTATAGGGTCAGCCCGCCTACCTTTCTCTATAAAATTCTTCCTGGTAGCCATCAC
ATTCCTTCTTTTTGACCTAGAAATCGCCCTCCTACTTCCTCTTCCATGGGCAACCCAAACAACAAATCTA
AAAACCATGCTCATCATAGCCCTCACCCTAATCTCACTCCTAGCAATCAGCTTAGCCTACGAATGAACCC
AAAAAGGATTAGAATGGACCGAATATGGTATTTAGTTTAAAACAAAACAAATGATTTCGACTCATTAAAT
TATGAATCAACCCGTAAATACCAAGTGTCTTTAGTATATATAAATATCATTATAGCTTTCACAGCATCCT
TAATAGGACTGTTAATATATCGGTCCCACTTAATATCATCACTCCTATGCCTAGAAGGAATAATATTATC
ACTATTTATCATAGCAACCCTTATCATCCTAAATGCACACTTCACCCTAGCCAGCATAATGCCAATTATT
CTACTAGTCTTCGCAGCATGCGAAGCAGCTCTAGGATTATCACTGCTAGTAATGGTATCAAACACATATG
GTACCGACTACGTACAAAACCTAAATCTTCTCCAATGTTAAAGTACATCATCCCAACAATCATACTAATG
CCTCTAACCTGAATATCAAAAACTAACATAGTCTGAACCAACACCACAGCCCACAGCCTATTAATTAGCT
TTACAAGCCTACTCCTCCTAAACCAATTTAACGACAATAGCCTAAACTTCTCACCAATATTCTTTTCCGA
CCCCTTATCTACCCCCCTTCTAATCCTAACAATATGACTCCTACCCCTAATATTAATAGCTAGCCAATCA
CACCTACTCAAAGAGCCACCAACCCGAAAAAAACTATTCATTACAATACTAATCACACTACAAACATTCC
TAATCATAACATTCTCAGCTATAGAACTAATCCTGTTCTATATCCTATTTGAGGCCACACTTATCCCAAC
CCTCATTATTATTACCCGATGAGGCAATCAAACAGAACGCCTTAACGCAGGCCTTTACTTTCTATTCTAC
ACCCTAATAGGATCTCTCCCACTCCTAGTAGCACTAATTTATATCCAAAATATCACAGGGTCCCTAAACT
TCCTGATACTTCAATATTGAACTCAAGCCGTACCTAACTCTTGATCCAACGTCTTCTTATGACTAGCGTG
CATAATAGCTTTTATGGTGAAAATGCCCCTCTACGGCCTCCACCTATGATTACCCAAAGCACATGTAGAA
GCACCCATCGCCGGCTCAATAGTCCTAGCCGCCATCCTACTAAAGCTAGGAGGGTATGGCATACTACGTA
TTACAACTATCCTAAACCCCCTAACAGAAATAATGGCATACCCATTCATCATACTCTCCCTATGAGGAAT
AATCATAACTAGCTCTATCTGCCTACGCCAAACAGACCTGAAATCACTCATCGCATACTCCTCCGTAAGC
CACATAGCACTCGTTATTGTAGCAATTCTTATTCAAACCCCGTGAAGCTACATAGGAGCAACAGCCCTGA
TAATCGCTCATGGCCTCACATCATCCATACTGTTCTGTCTAGCAAACTCAAACTACGAACGAATCCACAG
CCGAACGATAATCTTGGCCCGAGGGTTACAAACACTCCTTCCCCTAATAGCCGCCTGATGACTACTAGCG
AGCCTGACAAACCTGGCTCTACCACCCACTATTAACCTTATCGGAGAGCTACTAGTAGTCATATCCTCCT
TCTCATGATCAAACATTACCATTATCCTAATAGGAGCCAACATCACAATCACCGCCCTGTACTCACTATA
CATGCTAACTACCACTCAACGCGGCAAGCACACCCACCACATCAACAACATCACACCCTCATTTACACGA
GAAAATGCCCTAATAGCACTCCACATTTTACCCCTTCTATTACTATCCCTAAACCCTAAAATCATCCTAG
GTCCCCTCTACTGTAAGTATAGTTTAAGAAAAACACTAGATTGTGAATCTATTAATAGAAGCTCCAACCC
TTCTTACTTACCGAGAAAGCATGCAAGAACTGCTAATTCATGCCCCCATATCTAACAATATGGCTTTCCC
AGGCTTTTAAAGGATGGTAGCTATCCATTGGTCTTAGGAGCCAAAGAATTGGTGCAACTCCAAATAAAAG
CAATAGACCTCTTCTCCTCTACCACACTAACAATACTTTTTGTGCTAACACTACCCATCATAATAACAAA
CACCAACATCTATAAAAATGACAAATACCCAACATACGTAAAAAACACAGTCTCATCCGCCTTCCTAATT
AGCCTAATCCCAATAATCACATTCGCAAGTACAGGCCAAGAAATAATTATCTCAAACTGACACTGAATTA
CCATCCAAACCCTCAAACTAACCCTCAGCTTTAAAGCGGACTACTTCTCAATTGTATTTGCACCAGTAGC
ACTATTTGTCACATGATCCATCATAGAATTCTCAATATGGTACATGCACTCAGACCCACACATCAACCGA
TTCTTTAAATATCTCCTCCTCTTCCTCATCACAATAATAATCCTTGTCACAGCTAACAACCTCTTCCAAC
TATTCATTGGCTGAGAAGGCGTCGGAATCATGTCTTTCCTGCTAATTGGATGATGACACGGGCGTACAGA
TGCAAATACAGCTGCTATCCAAGCAATCCTCTATAACCGCATCGGAGACGTAGGATTCATTATAGCCATA
GCGTGATTTCTATCAAACCTAAATTCATGAGACCTACAACAAATCTTTATAATTAACCCTACCCACTCAA
ACCTCCCACTAATAGGACTAATTCTAGCCGCAACCGGAAAATCTGCCCAATTCGGCCTTCACCCCTGACT
CCCCTCAGCAATGGAAGGCCCCACACCCGTCTCAGCACTACTTCACTCAAGCACAATAGTTGTAGCAGGA
ATTTTCCTACTGATTCGATTCTACCCAATGATAGAGAATAATAACCTCATACAGACCATCACAATATGCT
TAGGGGCCATCACCACACTATTCACAGCAATATGTGCACTCACCCAAAATGACATCAAAAAAATCATTGC
CTTCTCCACTTCGAGCCAACTAGGTTTAATAATAGTAACAATCGGTATTAATCAACCTCACTTGGCATTC
CTACACATCTGCACACATGCATTCTTCAAAGCCATACTATTCATATGCTCCGGATCCATCATCCACAACC
TAAATAACGAACAAGACATCCGAAAAATAGGAGGCCTCTTCAAAACAATACCTTTCACTACAACAGCCCT
AATCGTAGGCAGCATAGCCCTCACAGGAGTACCATTCCTAACAGGATTCTACTCCAAAGACCTAATCATC
GAAGCCGCCAACACATCTTACACCAACGCCTGAGCCCTATTAATTACACTAATTGCCACCTCCCTCACAG
CCGTCTACAGTACCCGCATTATCTTTTTCGCACTACTAGGACATCCTCGCTTCCCCACATCAACCCCCAT
CAATGAGAACAACCCACTCTTATTTAACTCACTCAAACGCCTTCTAGCGGGGAGCATTTTTGCAGGATTT
ATTCTTTCCCACAACCTTCCCCCCACAACAACACCCCTAATAACCATGCCTTCCTACCTCAAAATAACAG
CCCTAGCAGTAACCATATTAGGCTTCACCCTGGCATTTGAAATCACCCTCAACACCCAAAACCTAAAATT
CAAATACCCCACAAACAACTTCAAATTCTCTACCCTTTTAGGATATTTCCCCATCATTATACATCGACTA
CCACCCTACCTAAGTCTAACAGCAAGCCAAAAACTAGCATCCTCCCTCCTAGACTCGGCATGACTAGAAA
ATATCCTTCCAAAATTCACAGCCCACGCACAACTAAAACTCTCAACACTAGTCTCAAACCAAAAAGGCCT
AATAAAATTATATTTCCTATCATTCCTTATCACTATCCCCCTCAGCCTAATCCTATTTAACTCCCACGCG
TAACCTCCATAATCACCACAACACCAACAAACAATGACCAGCCTGTCACTACGACCAATCAAACACCATA
ACTATATAAAGCTGCAACACCCATAGCTTCCCCACTAAAAACCCCAAAATCACTCATACTATAGACAACT
CAATCACCCAGACCACTAAACTTAAACACAAGCTCCACCTCTCCCTCCTTTAAAACATATAAAACCGCTA
AAAACTCCATCACCAACCCTAAAAGAAACGCCCCCAGCACAACCTTATTAGAAGCTCAGACCTCGGGGTA
CTGCTCAGTAGCCATTGCAGTCGTATAACCAAACACCACCAACATCCCACCCAAATAAACCAAAAATACC
ATTAAACCCAAAAAAGACCCGCCAAAATTCAACACCATACCACAACCAGCCCCACCACTAACAATCAAAC
CCAGCCCACCATAAATCGGCGAAGGCTTTGAAGAAAACCCAATAAAACCGACTACAAAAATAATACTCAA
AATAAATACAACATACGTTATCATTATTCTCATATGGACTCTAACCATAATCAACGGCATGAAAAACCAT
CGTTGTAATTCAACTACAAGAACACTAATGACAAACATCCGAAAATCTCACCCCCTAATAAAAATCATCA
ACGACGCACTCGTTGACCTCCCAGCTCCATCAAACATCTCATCATGATGAAACTTCGGCTCCCTACTCGG
CATCTGCTTAATCCTACAAATTCTAACAGGCCTATTCCTAGCCATACACTACACACCAGACACACTTACC
GCATTCTCATCGGTAACCCATATCTGCCGTGATGTAAACTATGGATGAGCCATCCGCTACATACACGCAA
ACGGCGCATCCATCTTCTTTATCTGCCTCTTTATTCACGTAGGACGCGGCCTATACTATGGCTCCTACAC
ATTCCTAGAAACCTGAAATATCGGAGTTATCTTACTACTCACAACCATAGCCACCGCATTTATAGGTTAC
GTACTACCATGAGGACAAATATCATTCTGAGGGGCAACAGTCATCACCAACTTACTATCAGCTATCCCCT
ACATTGGAACAGACCTAGTAGAATGAATCTGAGGAGGCTTTTCTGTAGATAAAGCCACCCTTACACGATT
CTTTGCCTTCCACTTTATTCTTCCATTCATCATCATAGCACTAGCCGCCGTCCACCTACTGTTTCTCCAC
GAAACAGGGTCCAACAACCCAACAGGAATCCCCTCAAACGCAGACAAAATCCCATTCCACCCCTATTACA
CAATCAAAGATATCCTGGGCGTACTACTTCTAATAACAATACTACTCACACTAACCTTATTTGCCCCAGA
CCTCCTAGGGGACCCAGACAACTACACCCCCGCAAACCCCCTTAGCACACCACCACACATCAAACCAGAA
TGATATTTCCTGTTCGCATACGCAATTCTCCGATCAATCCCTAACAAACTGGGAGGCGTACTAGCCCTAG
TCCTCTCAATCCTAATCCTAGCCCTCATCCCAATATTACATACATCCAAACAACGAAGCCTAATATTTCG
ACCCCTTAGCCAGTGCCTGTTCTGAGCATTAATCGCCGACCTACTAACACTCACATGGATTGGAGGACAA
CCCGTCGAACACCCCTACATCATTATCGGGCAACTCGCCTCCATCCTATACTTCCTCTTGATTTTAGTAC
TAATGCCAGTAGCAGGCATTATCGAAAATAAACTCCTAAAATGAAGAGTCTCTGTAGTATATGGCATTAC
CTCGGTCTTGTAAACCGAAAAAGGAAGCAACACACCTCCCTGAGACTCAAGGAAGAAGCCCAAGCTCCAC
CATCAGCACCCAAAGCTGAAATTCTAGATAAACTATTCCCTGATTTCCTTGTATGTACTACCTACAAGAT
TATAAAGTACTTAGTTACTATTATAGTCCTAAATGTACATACATACATGGCTATGTACGTCGTGCATTTA
TTGCTCTACCACATACAATAGTACATACTATGTATAATCGTACATAGGACATACTATGTATAATCGTGCA
TTACACTATTTAGTACATGCTTATAAGCATGTATTAGTGAACTGCTAGTTCCACATAGTACATGCTAGGT
CTTTATAGTACATGGCACATGTACTCAAATCATTTCCAGTCACCAAGCGTATCCCGTCCCCTAGATCACG
AGCTTGATCACCAGGCCGCGTGAAACCAGCAACCCGCTCGGCAGGTGCCCCTCTTCTCGCTCCGGGCCCA
TAACATGTGGGGGTTTCTAAGAATGAACTTTACCAGGCATCTGGTTCTTACTTCAGGGCCATCTCACCTG
GAATCGCCCATTCTTTCCTCTTAAATAAGACATCTCGATGGACTAGTGACTAATCAGCCCATGCCCAACA
TAACTGTGGTTTCATGCATTTGGTATTTTTATATTTTGGGGATGCTTGGACTCAACTAGACCTCCCGGTC
TGAATGCAGCCAATTAACTTGTAGCTGGACTCTAATTGAACGTTATTCATCAGCCTGGCAGTGAACTACA
TGGGCTATTCAGTCAATGGTTACAGGACATAGGAAAGTGCAGCCCCCATTCATCCGCCACCGGACATACA
TTAAGTTGTTCGCTAACATCACTGAGACATGCGTATTATTCAGTCAATGGTTACAGGACATACCTATATA
TATCCCCCCGGTGCTCCTTCAAATCTCTAATACACCTACTTAGTTACGCTTCTCCAAAGCAGAGAGCTAT
CCCCCTAGATTGTATAAACGAATTTGTTAAAAACTGAATACCAAGGCCCACACGAACCACGCAAGGCAGC
CCTACAAGTTGAACGT


Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.