Viewing data for Potamochoerus porcus
| Scientific name | Potamochoerus porcus |
| Common name | Red river hog |
| Maximum lifespan | 22.00 years (Potamochoerus porcus@AnAge) |
| Total mtDNA (size: 16693 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6586 | 10107 | 4214 | 2372 | 4478 | 5629 |
| Base content per 1 kb (bases) | 395 | 605 | 252 | 142 | 268 | 337 |
| Base content (%) | 39.5% | 60.5% | ||||
| Total protein-coding genes (size: 11342 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4492 | 6850 | 3020 | 1472 | 3116 | 3734 |
| Base content per 1 kb (bases) | 396 | 604 | 266 | 130 | 275 | 329 |
| Base content (%) | 39.6% | 60.4% | ||||
D-loop:
No data available for this section.
| Total tRNA-coding genes (size: 1499 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 561 | 938 | 322 | 239 | 411 | 527 |
| Base content per 1 kb (bases) | 374 | 626 | 215 | 159 | 274 | 352 |
| Base content (%) | 37.4% | 62.6% | ||||
| Total rRNA-coding genes (size: 2535 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 974 | 1561 | 535 | 439 | 607 | 954 |
| Base content per 1 kb (bases) | 384 | 616 | 211 | 173 | 239 | 376 |
| Base content (%) | 38.4% | 61.6% | ||||
| 12S rRNA gene (size: 962 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 398 | 564 | 217 | 181 | 222 | 342 |
| Base content per 1 kb (bases) | 414 | 586 | 226 | 188 | 231 | 356 |
| Base content (%) | 41.4% | 58.6% | ||||
| 16S rRNA gene (size: 1573 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 576 | 997 | 318 | 258 | 385 | 612 |
| Base content per 1 kb (bases) | 366 | 634 | 202 | 164 | 245 | 389 |
| Base content (%) | 36.6% | 63.4% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 277 | 404 | 199 | 78 | 186 | 218 |
| Base content per 1 kb (bases) | 407 | 593 | 292 | 115 | 273 | 320 |
| Base content (%) | 40.7% | 59.3% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 62 | 142 | 44 | 18 | 60 | 82 |
| Base content per 1 kb (bases) | 304 | 696 | 216 | 88 | 294 | 402 |
| Base content (%) | 30.4% | 69.6% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 637 | 908 | 359 | 278 | 471 | 437 |
| Base content per 1 kb (bases) | 412 | 588 | 232 | 180 | 305 | 283 |
| Base content (%) | 41.2% | 58.8% | ||||
| COX2 (size: 688 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 271 | 417 | 174 | 97 | 184 | 233 |
| Base content per 1 kb (bases) | 394 | 606 | 253 | 141 | 267 | 339 |
| Base content (%) | 39.4% | 60.6% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 340 | 444 | 216 | 124 | 218 | 226 |
| Base content per 1 kb (bases) | 434 | 566 | 276 | 158 | 278 | 288 |
| Base content (%) | 43.4% | 56.6% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 480 | 660 | 319 | 161 | 310 | 350 |
| Base content per 1 kb (bases) | 421 | 579 | 280 | 141 | 272 | 307 |
| Base content (%) | 42.1% | 57.9% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 384 | 571 | 265 | 119 | 258 | 313 |
| Base content per 1 kb (bases) | 402 | 598 | 277 | 125 | 270 | 328 |
| Base content (%) | 40.2% | 59.8% | ||||
| ND2 (size: 1042 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 377 | 665 | 273 | 104 | 268 | 397 |
| Base content per 1 kb (bases) | 362 | 638 | 262 | 100 | 257 | 381 |
| Base content (%) | 36.2% | 63.8% | ||||
| ND3 (size: 347 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 140 | 207 | 93 | 47 | 93 | 114 |
| Base content per 1 kb (bases) | 403 | 597 | 268 | 135 | 268 | 329 |
| Base content (%) | 40.3% | 59.7% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 546 | 832 | 391 | 155 | 379 | 453 |
| Base content per 1 kb (bases) | 396 | 604 | 284 | 112 | 275 | 329 |
| Base content (%) | 39.6% | 60.4% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 113 | 184 | 74 | 39 | 96 | 88 |
| Base content per 1 kb (bases) | 380 | 620 | 249 | 131 | 323 | 296 |
| Base content (%) | 38.0% | 62.0% | ||||
| ND5 (size: 1821 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 691 | 1130 | 480 | 211 | 509 | 621 |
| Base content per 1 kb (bases) | 379 | 621 | 264 | 116 | 280 | 341 |
| Base content (%) | 37.9% | 62.1% | ||||
| ND6 (size: 528 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 195 | 333 | 148 | 47 | 106 | 227 |
| Base content per 1 kb (bases) | 369 | 631 | 280 | 89 | 201 | 430 |
| Base content (%) | 36.9% | 63.1% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%) 
Alanine (Ala, A)
n = 17 (7.52%) 
Serine (Ser, S)
n = 14 (6.19%) 
Threonine (Thr, T)
n = 27 (11.95%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 10 (4.42%) 
Leucine (Leu, L)
n = 39 (17.26%) 
Isoleucine (Ile, I)
n = 25 (11.06%) 
Methionine (Met, M)
n = 12 (5.31%) 
Proline (Pro, P)
n = 13 (5.75%) 
Phenylalanine (Phe, F)
n = 14 (6.19%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 10 (4.42%) 
Glutamine (Gln, Q)
n = 10 (4.42%) 
Histidine (His, H)
n = 7 (3.1%) 
Lysine (Lys, K)
n = 5 (2.21%) 
Arginine (Arg, R)
n = 4 (1.77%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 13 | 9 | 3 | 3 | 20 | 4 | 9 | 8 | 2 | 1 | 2 | 6 | 1 | 5 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 5 | 6 | 5 | 1 | 0 | 4 | 6 | 0 | 5 | 4 | 4 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 13 | 2 | 5 | 0 | 5 | 0 | 0 | 4 | 2 | 0 | 1 | 0 | 2 | 8 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 3 | 0 | 0 | 1 | 3 | 2 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 64 | 83 | 39 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 21 | 67 | 39 | 100 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 68 | 96 | 47 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFLTIMSMIMTLFILFQLKISNYLYPMNPEPVEMKVQKHDTPWEMKWTKIYLPLSLPLR* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 4 (5.97%)
Threonine (Thr, T)
n = 6 (8.96%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (2.99%)
Leucine (Leu, L)
n = 10 (14.93%)
Isoleucine (Ile, I)
n = 5 (7.46%)
Methionine (Met, M)
n = 7 (10.45%)
Proline (Pro, P)
n = 7 (10.45%)
Phenylalanine (Phe, F)
n = 3 (4.48%)
Tyrosine (Tyr, Y)
n = 3 (4.48%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 2 (2.99%)
Glutamic acid (Glu, E)
n = 3 (4.48%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 3 (4.48%)
Histidine (His, H)
n = 1 (1.49%)
Lysine (Lys, K)
n = 5 (7.46%)
Arginine (Arg, R)
n = 1 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 2 | 5 | 2 | 0 | 3 | 0 | 3 | 3 | 0 | 1 | 0 | 1 | 0 | 3 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 4 | 1 | 1 | 0 | 2 | 1 | 0 | 0 | 1 | 2 | 0 | 2 | 0 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 3 | 0 | 1 | 1 | 4 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 7 | 17 | 25 | 19 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 4 | 17 | 20 | 27 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 10 | 37 | 14 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 41 (7.98%)
Serine (Ser, S)
n = 32 (6.23%)
Threonine (Thr, T)
n = 36 (7.0%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 37 (7.2%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 39 (7.59%)
Methionine (Met, M)
n = 32 (6.23%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 41 (7.98%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 16 | 24 | 6 | 3 | 22 | 12 | 12 | 5 | 2 | 6 | 1 | 28 | 2 | 17 | 24 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 11 | 10 | 17 | 3 | 14 | 7 | 19 | 7 | 9 | 5 | 13 | 1 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 18 | 3 | 6 | 9 | 11 | 2 | 1 | 3 | 12 | 8 | 2 | 4 | 9 | 8 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 8 | 2 | 8 | 7 | 7 | 2 | 3 | 1 | 4 | 0 | 0 | 0 | 0 | 1 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 150 | 104 | 137 | 124 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 133 | 97 | 208 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 51 | 122 | 203 | 139 | ||||||||||||
| COX2 (size: 688 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.95%)
Alanine (Ala, A)
n = 9 (3.95%)
Serine (Ser, S)
n = 19 (8.33%)
Threonine (Thr, T)
n = 20 (8.77%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 12 (5.26%)
Leucine (Leu, L)
n = 33 (14.47%)
Isoleucine (Ile, I)
n = 18 (7.89%)
Methionine (Met, M)
n = 16 (7.02%)
Proline (Pro, P)
n = 13 (5.7%)
Phenylalanine (Phe, F)
n = 7 (3.07%)
Tyrosine (Tyr, Y)
n = 11 (4.82%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 11 (4.82%)
Glutamic acid (Glu, E)
n = 14 (6.14%)
Asparagine (Asn, N)
n = 5 (2.19%)
Glutamine (Gln, Q)
n = 6 (2.63%)
Histidine (His, H)
n = 7 (3.07%)
Lysine (Lys, K)
n = 6 (2.63%)
Arginine (Arg, R)
n = 6 (2.63%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 5 | 14 | 3 | 5 | 17 | 3 | 5 | 5 | 1 | 2 | 2 | 7 | 1 | 5 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 3 | 6 | 0 | 0 | 1 | 3 | 3 | 2 | 2 | 5 | 6 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 14 | 0 | 4 | 2 | 8 | 1 | 0 | 4 | 7 | 4 | 2 | 0 | 2 | 3 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 13 | 1 | 4 | 7 | 4 | 2 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 55 | 60 | 69 | 45 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 57 | 60 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 57 | 104 | 52 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 18 (6.92%)
Serine (Ser, S)
n = 21 (8.08%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 37 (14.23%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 7 (2.69%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 21 (8.08%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 6 (2.31%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 7 | 6 | 5 | 4 | 20 | 2 | 5 | 6 | 1 | 2 | 3 | 10 | 1 | 6 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 2 | 2 | 8 | 8 | 0 | 4 | 3 | 12 | 1 | 0 | 2 | 10 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 9 | 1 | 6 | 2 | 7 | 2 | 2 | 2 | 5 | 6 | 2 | 1 | 2 | 4 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 6 | 2 | 2 | 2 | 2 | 1 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 66 | 72 | 54 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 67 | 56 | 95 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 77 | 116 | 53 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 24 (6.33%)
Serine (Ser, S)
n = 26 (6.86%)
Threonine (Thr, T)
n = 26 (6.86%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 19 (5.01%)
Leucine (Leu, L)
n = 55 (14.51%)
Isoleucine (Ile, I)
n = 43 (11.35%)
Methionine (Met, M)
n = 15 (3.96%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 25 (6.6%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 16 (4.22%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 19 | 24 | 11 | 5 | 4 | 27 | 6 | 11 | 5 | 1 | 2 | 5 | 10 | 2 | 7 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 3 | 4 | 8 | 12 | 0 | 3 | 6 | 13 | 2 | 1 | 8 | 14 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 15 | 0 | 2 | 5 | 14 | 0 | 1 | 4 | 6 | 9 | 0 | 2 | 5 | 11 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 4 | 2 | 1 | 10 | 5 | 4 | 0 | 2 | 6 | 0 | 1 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 84 | 91 | 115 | 90 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 94 | 75 | 157 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 134 | 160 | 63 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 31 (9.78%)
Serine (Ser, S)
n = 24 (7.57%)
Threonine (Thr, T)
n = 24 (7.57%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 14 (4.42%)
Leucine (Leu, L)
n = 54 (17.03%)
Isoleucine (Ile, I)
n = 29 (9.15%)
Methionine (Met, M)
n = 18 (5.68%)
Proline (Pro, P)
n = 19 (5.99%)
Phenylalanine (Phe, F)
n = 19 (5.99%)
Tyrosine (Tyr, Y)
n = 12 (3.79%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 4 (1.26%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 11 (3.47%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 5 (1.58%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 13 | 15 | 3 | 7 | 31 | 2 | 10 | 6 | 0 | 1 | 1 | 11 | 1 | 7 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 4 | 10 | 15 | 2 | 1 | 3 | 7 | 1 | 3 | 7 | 7 | 2 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 16 | 0 | 1 | 7 | 12 | 0 | 0 | 4 | 5 | 7 | 1 | 1 | 4 | 7 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 11 | 0 | 2 | 2 | 7 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 72 | 81 | 93 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 94 | 56 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 90 | 164 | 51 | ||||||||||||
| ND2 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 21 (6.07%)
Serine (Ser, S)
n = 28 (8.09%)
Threonine (Thr, T)
n = 36 (10.4%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 13 (3.76%)
Leucine (Leu, L)
n = 57 (16.47%)
Isoleucine (Ile, I)
n = 27 (7.8%)
Methionine (Met, M)
n = 45 (13.01%)
Proline (Pro, P)
n = 18 (5.2%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 17 (4.91%)
Glutamine (Gln, Q)
n = 11 (3.18%)
Histidine (His, H)
n = 4 (1.16%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 14 | 39 | 7 | 4 | 29 | 3 | 13 | 10 | 1 | 0 | 4 | 8 | 1 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 1 | 0 | 12 | 8 | 1 | 1 | 3 | 9 | 1 | 1 | 6 | 11 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 22 | 0 | 2 | 7 | 14 | 1 | 0 | 4 | 3 | 7 | 0 | 1 | 4 | 13 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 5 | 1 | 0 | 0 | 12 | 1 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 80 | 142 | 71 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 99 | 61 | 154 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 94 | 194 | 42 | ||||||||||||
| ND3 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 21 (6.07%)
Serine (Ser, S)
n = 28 (8.09%)
Threonine (Thr, T)
n = 36 (10.4%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 13 (3.76%)
Leucine (Leu, L)
n = 57 (16.47%)
Isoleucine (Ile, I)
n = 27 (7.8%)
Methionine (Met, M)
n = 45 (13.01%)
Proline (Pro, P)
n = 18 (5.2%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 17 (4.91%)
Glutamine (Gln, Q)
n = 11 (3.18%)
Histidine (His, H)
n = 4 (1.16%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 14 | 39 | 7 | 4 | 29 | 3 | 13 | 10 | 1 | 0 | 4 | 8 | 1 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 1 | 0 | 12 | 8 | 1 | 1 | 3 | 9 | 1 | 1 | 6 | 11 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 22 | 0 | 2 | 7 | 14 | 1 | 0 | 4 | 3 | 7 | 0 | 1 | 4 | 13 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 5 | 1 | 0 | 0 | 12 | 1 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 80 | 142 | 71 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 99 | 61 | 154 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 94 | 194 | 42 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 29 (6.33%)
Serine (Ser, S)
n = 38 (8.3%)
Threonine (Thr, T)
n = 42 (9.17%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 15 (3.28%)
Leucine (Leu, L)
n = 89 (19.43%)
Isoleucine (Ile, I)
n = 44 (9.61%)
Methionine (Met, M)
n = 36 (7.86%)
Proline (Pro, P)
n = 20 (4.37%)
Phenylalanine (Phe, F)
n = 18 (3.93%)
Tyrosine (Tyr, Y)
n = 16 (3.49%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 23 (5.02%)
Glutamine (Gln, Q)
n = 9 (1.97%)
Histidine (His, H)
n = 13 (2.84%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 10 (2.18%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 20 | 30 | 12 | 12 | 44 | 13 | 7 | 9 | 0 | 0 | 3 | 12 | 0 | 4 | 14 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 1 | 2 | 5 | 13 | 9 | 2 | 3 | 3 | 9 | 2 | 5 | 5 | 10 | 0 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 24 | 1 | 7 | 11 | 10 | 0 | 1 | 9 | 6 | 10 | 2 | 1 | 9 | 14 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 8 | 0 | 1 | 3 | 11 | 1 | 0 | 2 | 7 | 1 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 133 | 167 | 86 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 119 | 85 | 202 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 29 | 139 | 201 | 90 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 4 (4.08%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 8 (8.16%)
Methionine (Met, M)
n = 11 (11.22%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 5 | 8 | 2 | 5 | 6 | 1 | 6 | 2 | 0 | 1 | 0 | 4 | 1 | 2 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 3 | 1 | 3 | 4 | 0 | 1 | 1 | 2 | 0 | 0 | 1 | 1 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 2 | 0 | 3 | 1 | 3 | 0 | 0 | 2 | 2 | 2 | 0 | 2 | 3 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 21 | 21 | 30 | 27 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 10 | 21 | 17 | 51 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 32 | 41 | 18 | ||||||||||||
| ND5 (size: 1821 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.62%)
Alanine (Ala, A)
n = 39 (6.44%)
Serine (Ser, S)
n = 50 (8.25%)
Threonine (Thr, T)
n = 51 (8.42%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 23 (3.8%)
Leucine (Leu, L)
n = 86 (14.19%)
Isoleucine (Ile, I)
n = 54 (8.91%)
Methionine (Met, M)
n = 47 (7.76%)
Proline (Pro, P)
n = 27 (4.46%)
Phenylalanine (Phe, F)
n = 41 (6.77%)
Tyrosine (Tyr, Y)
n = 22 (3.63%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 12 (1.98%)
Glutamic acid (Glu, E)
n = 13 (2.15%)
Asparagine (Asn, N)
n = 33 (5.45%)
Glutamine (Gln, Q)
n = 17 (2.81%)
Histidine (His, H)
n = 15 (2.48%)
Lysine (Lys, K)
n = 21 (3.47%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 29 | 25 | 41 | 8 | 11 | 42 | 2 | 20 | 16 | 1 | 0 | 5 | 13 | 5 | 16 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 1 | 5 | 7 | 11 | 20 | 1 | 0 | 9 | 17 | 2 | 4 | 10 | 12 | 1 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 25 | 3 | 8 | 13 | 15 | 3 | 3 | 8 | 6 | 16 | 0 | 3 | 10 | 23 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 10 | 3 | 6 | 6 | 21 | 0 | 1 | 3 | 5 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 115 | 131 | 217 | 144 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 66 | 156 | 134 | 251 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 30 | 193 | 270 | 114 | ||||||||||||
| ND6 (size: 528 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (14.86%)
Alanine (Ala, A)
n = 7 (4.0%)
Serine (Ser, S)
n = 12 (6.86%)
Threonine (Thr, T)
n = 10 (5.71%)
Cysteine (Cys, C)
n = 3 (1.71%)
Valine (Val, V)
n = 24 (13.71%)
Leucine (Leu, L)
n = 18 (10.29%)
Isoleucine (Ile, I)
n = 14 (8.0%)
Methionine (Met, M)
n = 10 (5.71%)
Proline (Pro, P)
n = 3 (1.71%)
Phenylalanine (Phe, F)
n = 12 (6.86%)
Tyrosine (Tyr, Y)
n = 10 (5.71%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 3 (1.71%)
Glutamic acid (Glu, E)
n = 10 (5.71%)
Asparagine (Asn, N)
n = 4 (2.29%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 4 (2.29%)
Arginine (Arg, R)
n = 1 (0.57%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 0 | 3 | 5 | 0 | 0 | 0 | 5 | 0 | 0 | 14 | 1 | 3 | 6 | 12 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 3 | 0 | 4 | 1 | 1 | 1 | 12 | 3 | 3 | 8 | 2 | 1 | 0 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 1 | 6 | 0 | 2 | 0 | 3 | 1 | 10 | 0 | 1 | 8 | 2 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 5 | 5 | 3 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 9 | 46 | 51 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 28 | 32 | 78 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 40 | 10 | 28 | 98 | ||||||||||||
| Total protein-coding genes (size: 11410 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 214 (5.63%)
Alanine (Ala, A)
n = 255 (6.71%)
Serine (Ser, S)
n = 283 (7.45%)
Threonine (Thr, T)
n = 313 (8.24%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 194 (5.11%)
Leucine (Leu, L)
n = 587 (15.45%)
Isoleucine (Ile, I)
n = 324 (8.53%)
Methionine (Met, M)
n = 262 (6.89%)
Proline (Pro, P)
n = 191 (5.03%)
Phenylalanine (Phe, F)
n = 225 (5.92%)
Tyrosine (Tyr, Y)
n = 139 (3.66%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 71 (1.87%)
Glutamic acid (Glu, E)
n = 100 (2.63%)
Asparagine (Asn, N)
n = 153 (4.03%)
Glutamine (Gln, Q)
n = 87 (2.29%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 98 (2.58%)
Arginine (Arg, R)
n = 66 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 179 | 145 | 208 | 68 | 62 | 273 | 49 | 110 | 77 | 10 | 30 | 27 | 116 | 21 | 95 | 130 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 54 | 7 | 20 | 46 | 90 | 108 | 11 | 40 | 46 | 101 | 27 | 34 | 58 | 95 | 4 | 55 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 74 | 171 | 13 | 51 | 58 | 105 | 11 | 11 | 47 | 65 | 74 | 13 | 25 | 54 | 99 | 32 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 69 | 83 | 17 | 28 | 43 | 81 | 17 | 5 | 11 | 48 | 2 | 1 | 0 | 5 | 1 | 91 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 834 | 897 | 1209 | 861 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 470 | 984 | 755 | 1592 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 275 | 1053 | 1673 | 800 | ||||||||||||
>NC_020737.1 Potamochoerus porcus isolate GLC18 mitochondrion, complete genome GTTAATGTAGCTTAAATTACCAAAGCAAGGCACTGAAAATGCCTAGATGAGCCTCATAGCTCCATAAACA CACAGGTTTGGTCCTGGCCTTTCTATTAGTTCTTAGTAAAATTACACATGCAAGCATCCGCGCCCCGGTG AGAATGCCCTCTAGATCTTGAAGATTAAAAGGAGCAGGTATCAAGCACACCCAGACGGTAGCTCATAACG CCTTGCTTAACCACACCCCCACGGGAAACAGCAGTGATAAAAATTAAGCCATGAACGAAAGTTTGACTAA GTTATATTAATTTAGAGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAATTAATAG ATATACGGCGTAAAGAGTGTTAAAGAAAAAACCACAATAGAGTTAAATTATAACTAAGCTGTAAAAAGCC CTAGTTAGAATAAAATAACCTGCAAAAGTGACTCTAAAGTCTCTGATACACGACAGCTAGGGTCCAAACT GGGATTAGATACCCCACTATGCCTAGCCCTAAACCTAGATAGTTATACAACAAAACTATTCGCCAGAGTA CTACTCGCAACAGCCTAAAACTCAAAGGACTTGGCGGTGCTTCACACCCACCTAGAGGAGCCTGTTCTAT AATCGATAAACCCCGATAAACCTTACCAACCCTTGCCAATTCAGCCTATATACCGCCATCTTCAGCAAAC CCTAAAAAGGAACAATAGTAAGCACAATCATCACACATAAAGACGTTAGGTCAAGGTGTAGCTTATGAGT TGGGAAGAAATGGGCTACATTCTCTGCATAAGAGCATCCACCCATACGAAAGTTTTTATGAAACTAAAAA CTAAAGGAGGATTTAGCAGTAAATCAGGAATAGAGTGCCTGATTGAATAAGGCCATGAAGCACGCACACA CCGCCCGTCACCCTCCTCAAGCATGTAGTAGTACAAAATAATCTATATTTAGTTACATAATCATGTAAGA GGAGACAAGTCGTAACAAGGTAAGCGTACTGGAAAGTGTGCTTGGATTATCAAAGTATAGCCTAAAATAA AGTACCTAGCTTACACCTAGGAGATCCCACAACGTATGGGTACTTTGAACTAAAGCTAGCTCAACATACT AGATAAACATAAAATTATACTCAAATAAAATAAAACATTTACCCAACACTAAAGTATAGGAGATAGAAAT TTTTACCTTTGACGCTATAGAGATAGTACCGTAAGGGAAAGATGAAAGAATCAAATTAAAGTAAAAAAAA GCAAAGATTAACCCTTCTACCTTTTGCATAATGGTTTAACTAGAAAAAATCTAACAAAGAGAACTTCAGC TAGATACCCCGAAACCAGACGAGCTATCTATGAGCAGTTTAAAAGAACCAACTCATCTATGTGGCAAAAT AGTGAGAAGACTTATAGATAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTGTCCGAGAAAGAA TTTCAGTTCAACCTTAAAAATACCTCAAAAACTCTAAATTCCAATGTATTTTTAAGAGATAATCTAAAAA GGTACAGCTTTTTAGAAACGGGTACAACCTTAACTAGAGAGTAAAGTCTTAATACCACCATAGTAGGCCT AAAAGCAGCCATCAATTGAGAAAGCGTTAAAGCTCAACAAACCCACCAACATAATCCCAATAATTAATAA TAAACTCCTAGCCCAATATCGGACTAATCTATTAAAACATAGAAGCAATAATGTTAATATGAGTAACAAG AAACCTTTCTCCTTGCACACGCTTACATCAGTAACTAATACTATACTGATAATTAACAATCAATAAACCA AAACAACACTAAAACGTTTATTAACCATATTGTTAACCCGACACAGGAGTGCACTAAGGAAAGATTAAAA GAAGTAAAAGGAACTCGGCAAACACAAACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATTACCAGT ATTAGAGGCAATGCCTGCCCAGTGACATCAGTTTAACGGCCGCGGTATTCTGACCGTGCAAAGGTAGCAT AATCACTTGTTCTCTAAATAAGGACTTGCATGAATGGCCACACGAGGGTTTTACTGTCTCTTACTTCCAA TCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATAAAAAAATAAGACGAGAAGACCCTATGGAGCTTT AATTAACTAATCTAAAAGTTAAGCAACTTAACCACAAAGGGATAACATAAAACTTAATATGGATTAGCAA TTTTGGTTGGGGTGACCTCGGAGCACAAAAAACCCTCCGAGTGATTTTAATCTAGACAGACCAGTCAAAA CAACTATAAATATCACTTATTGATCCAAAATTTTGATCAACGGAACAAGTTACCCTAGGGATAACAGCGC AATCCTATTATAGAGTTCCTATCGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACACCCAAATGG TGCAACCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCA ATCCAGGTCGGTTTCTATCTATTACAAATTTCTCCCAGTACGAAAGGACAAGAGAAATGAGACCAACCTC ACAAATGCGTCTCAGAGACAATTAATGATATAATCTCAACTTAATTAACTCATGATAAACCCAACCCTAG ATCAGGGCATATTAGGGTGGCAGAGACCGGTAATTGCGTAAAACTTAAACCTTTATTACCAGAGGTTCAA CTCCTCTCCCTAATAATATGTTCGTAATTAACATCTTAAGCCTCATCATTCCTATCCTATTAGCCGTAGC GTTCCTTACCCTAGTAGAACGAAAAGTACTAGGCTATATACAACTACGAAAAGGACCAAATGTTGTAGGT CCTTACGGCCTACTCCAACCCATTGCTGACGCCCTAAAACTATTCACTAAAGAACCCCTACGACCAGCCA CATCCTCAACCTCCATATTCATCATTGCACCAATTCTAGCCCTATCCTTAGCATTAACAATATGAATTCC GCTGCCAATACCGTATCCTCTAATCAATATGAACTTAGGAGTACTATTTCTACTAGCCATATCAAGCCTG GCAGTCTACTCCATCCTATGATCAGGATGGGCATCCAACTCAAAATACGCACTCATCGGAGCTCTACGAG CGGTAGCCCAAACAATCTCATATGAAGTAACACTAGCAATTATTCTACTATCAGTACTACTAATAAATGG ATCATACACCTTATCTACCCTCATCACAACACAAGAACATATCTGAATAATCTTTACATCCTGACCCCTA GCCATAATATGATTCATTTCAACCCTAGCAGAAACCAACCGAGCTCCATTTGACCTTACAGAAGGGGAAT CAGAACTTGTATCAGGCTTCAACGTAGAATATGCAGCCGGACCCTTTGCCTTATTCTTCATAGCAGAATA TGCTAACATTATTATAATAAATGCATTTACAGCAATTCTCTTTCTAGGAGCATTCCATGATATACACACA TCCGAATTATACACAATCAACTTCGTGTTAAAAACACTCGCATTAACAATTACTTTCCTATGAATTCGAG CATCATACCCACGATTCCGATACGATCAACTAATGCACCTACTATGAAAAAGCTTTCTACCCTTGACACT AGCCCTATGCATATGACACATTTCACTCCCCATCATAACAGCAAGCATTCCCCCACAAACATAGAAATAT GTCTGATAAAAGAGTTACTTTGATAGAGTAAAAAATAGAGGTTCAAACCCTCTTATTTCTAGAACAATAG GACTCGAACCTAAACCTGAGAATTCAAAATTCTCCGTGCTACCAAAATACACCACATTCTATAGTAAGGT CAGCTAAATCAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTCATATCCTTCCCGTACTAATAAACCC CTTAACCTATGCCACTCTTATTATAACTGTAATATCTGGAACCATATTGGTAATAATCAGCTCGCACTGA CTACTTATCTGAATTGGATTCGAAATAAACCTACTTGCAATAATCCCAGTATTAATAAAAAATTTTAACC CACGAGCCATAGAGGCAGCCACAAAATATTTCCTAACACAAGCCACAGCCTCCATAGTACTAATAATAGC CATCATTATTAACTTTCTATACTCCGGCCAGTGAACCGTCACAAAGTTATTCAACCCAATAGCAATAATA ATAATAACCATAGCCCTAGCCATAAAACTGGGACTTTCACCCTTCCACTTTTGAGTCCCAGAAGTAACCC AAGGCATTTCACTACAAGCAGGACTACTATTATTAACATGACAAAAATTAGCCCCATTATCAGTACTATG CCAAATTTCACAATCAATTAACCCCAACTTAATGCTAACCATAGCCATACTGTCAATCCTAGTCGGAGGC TGAGGGGGACTAAACCAAACCCAACTTCGAAAAATCATAGCGTACTCATCAATCGCACACATAGGATGAA TAACAGCAGTACTGCCATACAACACAACTATAACAATTTTAAACCTACTAATCTACATTACAATAACACT AACTATATTCATATTACTAATCCATAGCTCAACAACCACAACCTTATCCCTATCTCTCACATGAAACAAA ACACCTATCATCACAAGCCTAATGATGATAATCCTACTCTCAATGGGAGGTTTACCCCCACTATCAGGAT TCGTACCAAAATGAATAATTATCCAAGAAATAACAAAAAATGAAAGCATTATTATACCAACACTTATAGC AATAACAGCACTACTAAATCTCTACTTTTACATGCGACTAGCCTACTCCTCCTCACTAACCATATTTCCA TCCGTCAATAACATAAAAATAAAATGACAATTTGAATATACAAAACGAATAAAACTACTCCCCACAATGA TCGTGCTATCAACACTAATTCTACCCATAACACCAGCCCTTTCATCCTTAAACTAGGAATTTAGGTTAAT ACAGACCAAGAGCCTTCAAAGCTCTAAGCAAGTACAAAGTACTTAACTCCTGAAAACATAAGGGCTGCAG GACTCATCCTACATCAATTGAATGCAAATCAAACACTTTAATTAAGCTAAGTCCTCACTAGATTGGCGGG ATTACACACCCACGAAACTTTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCTCCC GCCGCGGGAAAAAAAAGGCGGGAGAAGTCCCGGCAGAATTGAAGCTGCTTCTTTGAATTTGCAATTCAAT ATGGTATTTCACTACGGAACCTGGTAAAAAGAGGACTCAACCTCTGTCTTTAGATTTACAGTCTAACGCT TACTCAGCCATTTTACCTATGTTCGTAAATCGTTGACTATACTCAACAAACCACAAAGACATTGGCACCT TGTATTTGCTGTTTGGTGCCTGAGCAGGAATAGTAGGTACCGCCTTGAGCCTGTTAATTCGTGCTGAACT GGGTCAGCCCGGAACTTTACTCGGTGATGACCAAATCTATAATGTAATTGTTACAGCCCATGCCTTCGTA ATAATCTTTTTTATGGTAATACCTATCATAATCGGGGGTTTTGGTAATTGACTTGTACCGTTAATAATTG GAGCACCTGATATAGCCTTCCCACGTATAAACAACATGAGCTTCTGACTACTTCCACCATCCTTTCTGCT ACTACTAGCATCCTCAATAGTAGAAGCTGGGGCGGGTACTGGATGAACCGTATATCCACCCTTAGCTGGG AATCTAGCCCACGCAGGCGCTTCGGTTGATTTAACAATTTTCTCCCTACATCTTGCAGGAGTATCATCAA TCTTAGGGGCTATCAATTTTATTACCACAATCATTAACATAAAACCCCCTGCAATGTCCCAATACCAAAC ACCCCTATTTGTCTGATCAGTACTAATTACAGCCGTATTACTTCTACTGTCTCTGCCAGTTTTAGCGGCT GGTATTACCATGCTATTAACAGATCGCAATCTAAACACAACCTTCTTTGACCCAGCAGGTGGAGGAGACC CAATCCTTTATCAACACCTATTCTGATTCTTCGGACACCCAGAAGTATATATTCTCATCTTGCCAGGATT CGGAATAATCTCCCACATTGTAACTTATTATTCGGGTAAAAAGGAGCCATTCGGATATATAGGCATAGTA TGAGCTATAATATCTATTGGATTTCTAGGTTTTATTGTATGGGCCCACCATATGTTTACTGTAGGAATAG ATGTAGACACACGAGCGTACTTCACGTCCGCTACAATAATTATTGCTATTCCAACTGGGGTAAAAGTGTT TAGCTGACTAGCTACCCTTCATGGCGGTAATATTAAATGATCACCCGCAATACTATGAGCCCTAGGCTTC ATCTTCCTGTTTACTGTGGGAGGTCTAACGGGCATCGTACTGGCTAATTCATCTTTAGATATTGTTCTGC ACGACACGTACTATGTAGTTGCACATTTCCACTATGTATTATCCATAGGAGCAGTATTCGCCATTATAGG GGGTTTCGTTCACTGATTCCCTCTATTCTCTGGGTACACACTCGACCAGACATGAGCAAAAATCCACTTT GTAATTATATTTGTAGGAGTAAACATAACCTTCTTCCCACAACATTTTCTAGGACTGTCTGGAATGCCTC GACGATACTCCGATTATCCTGATGCATACACAGCATGAAACACTATTTCCTCAATAGGCTCATTCATCTC ACTAACAGCAGTAATATTAATGATCTTCATTATCTGGGAAGCATTCGCATCAAAGCGAGAAGTATCTGCA GTAGAACTAACAAGTACAAACCTGGAGTGACTGCACGGATGCCCTCCTCCTTATCATACATTTGAAGAAC CAACATACATTAATATAAAATAGATACAAGAAAGGAAGGAATCGAACCCTCTTTCACTGGTTTCAAGCCA ACGCCATAGCCACTATGTCTTTCTCAATAACTGAGATACTAGTAAAATATTACATAACTTTGTCGAAGTT GTATTACAGGTGAAAGCCCTGTGTATCTCTATGGCTTATCCTTTTCAACTAGGCTTTCAAGATGCCGCTT CGCCAATTATAGAAGAACTCCTACATTTCCATGACCACACCCTAATAATTGTATTTTTAATTAGCTCTTT AGTGTTATATATTATTTCCCTCATACTAACAACAAAACTGACACACACCAGCACAATAGATGCCCAAGAG GTAGAAACAATTTGAACAATCCTACCCGCTATTATTCTAATCCTAATTGCCCTTCCATCACTACGAATTC TATATATAATAGACGAAATCAACAACCCTGCCTTAACTGTAAAAACTATAGGACATCAGTGGTACTGAAG CTATGAATATACAGACTATGAAGATCTCACCTTTGACTCATACATAATCCCCACATCAGACCTTAAGCCC GGAGAAATACGACTACTAGAAGTAGACAATCGGGTTGTTTTACCAATAGAAATAACAATTCGAATACTAG TATCTTCTGAAGACGTACTACACTCATGAGCCGTCCCATCTCTCGGCCTAAAAACAGATGCCATTCCAGG GCGACTAAATCAAACAACCCTAATATCCACACGACCCGGTCTTTATTACGGACAATGCTCAGAAATCTGC GGGTCAAACCATAGCTTTATGCCCATTGTACTCGAACTGGTCCCACTGAAGTACTTCGAAAAATGGTCAA CATCAATACTAACAGGCTCATTGAGAAGCTAACCAGCACTAACCTTTTAAGTTAGAGATTGGGGGCTTAA GTCCTCCCTCAATGATATGCCACAATTGGACACATCTACATGATTTCTTACAATTATATCAATAATTATA ACACTATTTATTTTATTTCAACTAAAAATCTCGAACTACTTGTACCCAATGAACCCAGAACCAGTAGAAA TAAAGGTTCAAAAACATGATACCCCCTGAGAAATAAAATGAACGAAAATCTATTTACCTCTTTCATTACC CCTACGATAATAGGACTACCTATTGCTACCTTAATCATCGTCTTTCCTAGCCTATTATTCCCCACACCCA AACGACTCATTAACAACCGCACAGTCTCTATTCAACAATGGTTAATCCAGCTAGCATCTAAACAAATAAT AGCCATCCATAACCAAAAGGGCCAGACCTGATCACTAATGCTCATATCTCTAATCATATTCATTGGCTCA ACAAATATCCTAGGCCTATTACCACACTCATTCACACCTACCACGCAACTATCAATAAACTTAGGCATAG CAATTCCCCTGTGATCAGCGACTGTATTCACAGGATTCCGCCATAAAACTAAGACATCTCTAGCTCACTT TCTACCACAAGGAACACCTGCTCCACTAATTCCCATGCTCGTAATTATCGAAACCATTAGCCTATTTATT CAACCAGTAGCCCTAGCTGTACGATTAACAGCAAACATCACAGCAGGACACCTGCTAATTCACTTAATCG GAGGAGCCACCTTAGCTCTACTTAGCATCAACACCATAACAGCCTTTATCACATTCACTATCCTTGTTCT ACTGACTATTCTTGAATTCGCAGTGGCCCTAATCCAAGCCTATGTATTCACACTACTAGTAAGCCTGTAT TTACATGACAACACATAATGACCCACCAAGCACACGCATATCACATAGTAAACCCAAGTCCATGACCACT TACCGGAGCCCTATCAGCTCTACTAATAACATCGGGTCTAGCCTTATGATTCCATTTTAACTCTGTCCTC CTACTATCCCTAGGACTACTAACCAATACTTTAACGATATATCAGTGGTGACGAGATATTATTCGAGAAA GTACTTTCCAAGGTCACCATACACCAGTTGTCCAAAAAGGCCTACGATATGGTATAATCCTATTTATCAT CTCTGAAGTTCTGTTCTTCACAGGATTCTTCTGAGCCTTCTACCACTCAAGCCTGGCACCAACACCCGAG TTGGGAGGTTGCTGACCACCAACAGGAATTCACCCACTAAATCCCCTAGAGGTACCACTACTAAACACTT CAATCCTCCTTGCCTCAGGAGTATCAATTACCTGAGCTCATCATAGCTTAATAGAAGGGGACCGAAAACA TATACTTCAAGCACTATCCATTACCATCGCACTAGGCGTATATTTCACCCTTCTCCAAGCCTCAGAATAC TACGAAGCACCATTCACAATCTCGGACGGAGTGTACGGATCTACCTTCTTCGTAGCCACAGGATTTCATG GATTACACGTAATTATTGGATCTACATTTCTAGCAGTATGCCTCCTACGACAATTAAAGTTCCACTTCAC ATCTAACCATCACTTTGGCTTCGAAGCCGCAGCCTGATACTGACACTTTGTAGATGTAGTCTGACTATTC CTTTACGTATCAATCTATTGATGGGGATCTTACTCTTTTAGTATCAAATAGTACAATTGACTTCCAATCA ATCAGCTTCGGTAAACCCCGAAAAAGAGTAATAAATATTATACTAACACTACTCACAAATGTAACCCTGG CCTCCTTACTCGTATTAATCGCATTCTGACTACCCCAACTAAACGCATACTCGGAAAAAACAAGCCCATA CGAATGTGGGTTTGACCCTATGGGATCAGCACGCCTTCCATTCTCAATGAAATTTTTCCTAGTAGCAATT ACATTTCTCCTTTTTGACCTAGAAATTGCCCTACTTCTTCCCTTACCATGAGCACTTCAGACGAACGACC TAAAAACAATGCTCACAATAGCACTATTTCTTCTTACACTATTAGCAGCAAGCCTAGCATACGAATGGAC CCAAAAAGGCCTAGAATGGACAGAATATGATAATTAGTTTAAAACAAAACAAATGATTTCGACTCATTAG ACTATGATTTATCTCATAATTATCAAGTGCCATTAGTATACATGAATATCATCATAGCATTTGCAATTGC CCTTATAGGACTACTCATATATCGATCTCACTTAATATCTTCACTTCTATGCTTAGAAGGAATAATACTA TCACTCTTCATTATGTCTACCTTAATTATCTTGAACACACACTTCACCCTGGCCAGCATAATACCCATCA TCCTCTTGGTATTTGCAGCCTGCGAGGCTGCACTCGGCCTATCATTACTAGTAATGGTATCCAATACATA TGGTAGCGACTACGTTCAAAACTTAAATCTCCTACAATGCTAAAAATCATCATTCCTACAACAATACTAC TGCCTATAACATGAATATCTAAGCACAATATAATCTGAATTAATACTACAGTACACAGCCTTCTTATCAG CCTAATCAGCTTGTCTCTGCTAAATCAACTGAATGACAACAGCCTTAACTTTTCCCTAATATTCTTCTCC GACTCACTATCAACACCCCTACTAATTCTAACCACATGACTCCTTCCTCTCATACTGATAGCTAGCCAAT CCCACCTGTCAAAAGAAACAACAACCCGAAAAAAACTATATATTACTATACTAATCCTACTGCAATTATT CCTAATTATAACTTTCACCGCCACTGAACTAATCCTATTCTACATCCTATTTGAAGCAACACTAGTACCC ACACTAATTATTATTACACGCTGAGGAAATCAAACAGAACGACTCAACGCAGGACTATACTTCCTGTTCT ACACTCTAGCAGGATCTCTACCACTACTAGTAGCGCTGGTCTACATTCAAAATATTACAGGCTCACTAAA CTTCTTAATTATCCACTACTGATCTCACCCATTATCTAATACTTGGTCTAATGTCTTCATATGGCTAGCA TGCATCATAGCCTTCATAGTAAAAATGCCACTGTACGGTCTCCACCTCTGACTACCAAAAGCCCATGTAG AAGCCCCTATTGCAGGTTCAATAGTACTTGCAGCCGTACTACTAAAACTCGGAGGCTATGGCATAATACG AATTACGACTATTCTAAACCCACTAACAGACTACATAGCTTACCCATTCCTTATGCTTTCCATATGAGGT ATAGTCATAACTAGTTCTATTTGCTTACGCCAAACTGATCTAAAATCCCTAATTGCCTATTCATCAGTAA GCCACATAGCACTTGTAATCGTAGCGATCATGATTCAAACTCCATGAAGCTTCATAGGAGCCACAGCCCT TATAATCGCCCACGGACTAACATCCTCCATACTATTCTGTCTGGCTAACACCAACTATGAACGAGTACAC AGCCGAACCATAATCTTAGCCCGAGGACTACAAACATTTCTTCCACTCATAGCAACATGATGACTAATGG CTAGCCTCGCAAACTTAGCCCTGCCCCCATCCATTAACCTAATCGGAGAACTACTCATTATCACATCATC ATTCTCCTGATCCAACATCACAATCATTCTTATAGGGATAAATATAATAATTACAGCCCTCTACTCCCTC TATATACTAATCACAACACAACGAGGAAAATATACTCACCACATTAACAACATCAAACCCTCATTTACAC GGGAAAACGCTCTCATGGCCCTGCACATTCTACCACTGCTACTACTAACCCTAAACCCTAAAGTAATTTT AGGGCCCCTTTACTGTAGATATAGTTTAACAAAAACACTAGATTGTGGATCCAGTAATAGAATCTTAAAT ATTCTTATCTACCGAAAAAGTCTGCAAGAACTGCTAACTCATGCTTCCACACCTAAAAATGTGGCTTTTT CAACTTTTAAAGGATAACAGTTATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAATTCCAAATAAAAG TAATAAACTCATTCGCCCCACTCACACTAACCACACTAACCATTCTAGTCATACCAATTATAATGTCCAA CTCAAATATCTACAAAACCAACCTCTATCCCAACTACGTGAAAAACATCGTATCCTGCGCCTTCACCCTC AGCCTAGTCCCTTTACTAATATTTATCCACACGGGCCAAGAAACAACTATCTCAAACTGACACTGAATAA CCTTACAAACCGTAGAACTATCTCTTAGCTTCAAAATAGATTACTTCTCAGTAATATTCACTCCCGTAGC ACTATTTGTCACATGATCAATTATAGAGTTCTCCATATGATATATACACTCGGACCCTTTCATTAATCGA TTTTTTAAATACCTATTACTATTCTTAATTACTATAATAATTCTCGTAACCGCTAATAACCTCTTCCAAC TTTTTATCGGATGAGAGGGCGTAGGAATTATGTCGTTCTTACTAATCGGATGATGACACGGACGAACAGA TGCCAACACAGCTGCACTACAAGCAATCTTATACAATCGAATTGGAGATATTGGATTCATCCTATCTATA GCATGATTCCTATCTCACTCAAACGCATGAGATTTCCAACAAATCTTTATACTAAATGACGAATGCCCAA ACATACCATTAATAGGCCTACTCCTAGCTGCAGCAGGAAAATCAGCTCAATTCGGACTACATCCCTGATT ACCCTCGGCAATAGAAGGCCCAACTCCTGTGTCAGCATTACTGCACTCCAGCACAATAGTGGTAGCAGGA GTATTCCTACTTATTCGCTTCTACCCCTTAATAGAAACTAACAAACTAGTCCAAACTATTACACTATGCT TAGGAGCTATCACCACCTTGTTCACAGCACTATGCGCAATCACGCAGAACGATATTAAAAAAATCGTGGC CTTCTCAACTTCAAGCCAACTAGGCCTAATGATAGTAACAATCGGAATCAACCAACCCCACTTAGCATTT CTTCATATCTGTATACATGCCTTCTTTAAAGCAATATTATTCATATGCTCCGGGTCCATCATTCACAACC TCAACGACGAACAAGACATCCGAAAAATAGGCGGACTGTACAAAGCAATACCATTTACAACAACAGCACT AACCATCGGAAGTCTAGCACTAGCGGGAATACCCTACCTCACAGGATTTTACTCAAAAGACCTTATTATT GAAGCAGCAAGCACATCCTATACAAATGCCTGAGCCCTATTAATAACATTAATTGCCACATCTTTGACTG CTGCTTACAGCACTCGAATTATCTTCTTCACACTCTTAGGACAACCACGCTTCTCACCTCTAGTACTAAT CAATGAAAATAACCCCTTACTAATCAACTCCATTAAACGTCTCCTAATCGGAAGTATTTTTGCCGGCTTT ATCATTTCCAACAGCATCCCACCAATAATAACACCAAACATGACAATACCCCTTTACATAAAAACGACAG CCCTAGTCGTGACCATTATAGGCTTTATATTAGCCCTAGAACTAAACAACATAACCTACTACCTAAAACT TGACCACCCGTCACAAACATATAAATTCTCCAACATACTAGGGTATTACCCCTCCATTATACACCGCCTA CCAACATACTATAACCTATCTATAAGTCAAAAATCTGCATCATCCCTATTAGATATGATCTGACTAGAAA TTATTCTACCAAAAATGACTTCTCATATTCAAATAAAAATATCTATTATAGTATCAAATCAAAAAGGCCT AATTAAATTGTACTTTCTTTCCTTTCTCATTACTATTACAGTAAGCATAGTATTATTTAATTTCCACGAG TAATCTCCATAATAACAACAACCCCAATAAGCAATGATCAGCCAGTAACAATAACCAATCAAGTACCATA ACTATATAAAGCAGCAATACCCATAGCTTCTTCACTAAAAAACCCTGAATCACCCGTATCATAAATTACT CAATCCCCAAGCCCGTTAAACTCAAAAATAACCTTCACTTCTTCTTCTTTTAATGCATAACAAACCATAC AAAGCTCTATTATAAGACCAGAAACAAATACCCCCAACACAGTCTTGTTAGAAACCCAGACCTCGGGATA CACCTCAGTAGCCATGGCAGTGGTATAGCCAAAAACCACTAACATACCCCCCAAATAAATCAAAAACACC ATTAAACCCAAAAAAGATCCACCATAATTCAATACAATGCCACAACCAACCCCACCACTCACAATCAACC CAACACCACCATAAATAGGAGAAGGCTTAGAAGAAAAACCAACAAATCCAATAACAAAAATAGTGCTTAA AATAAACGCAAGATATATTGTCATTATTCTCACATGGAATCTAACCATGACCAATGACATGAAAAATCAT CGTTGTACTTCAACTACAAGAACCTTAATGACCAACATCCGAAAATCACACCCACTAATAAAAGTTATCA ACAATGCATTCATTGACCTTCCAACCCCCTCAAATATTTCATCATGATGAAACTTCGGTTCCTTACTAGG CATCTGCTTAATCTTACAAATCCTTACAGGCCTATTCTTAGCAATACACTATACATCAGATACAACAACA GCCTTCTCATCAGTAGCACACATCTGTCGAGACGTAAATTATGGATGAATCATCCGCTACTTACATGCAA ACGGAGCATCAATATTCTTCATTTGCCTATTCATCCATGTAGGTCGAGGCCTATACTATGGATCCTACAT GTTTACAGAAACATGAAACATCGGAGTAATCCTGTTATTCACTGTCATAGCAACAGCCTTCGTAGGTTAT GTCCTACCCTGAGGACAAATATCATTCTGAGGGGCCACAGTCATCACAAATCTATTATCAGCTATTCCCT ACATCGGAACAAACCTTGTAGAGTGAATCTGAGGGGGCTTCTCCGTCGACAAAGCAACCCTCACACGATT CTTTGCCTTCCACTTCATCCTACCCTTTATTATTATCGCTCTTGCAACTGTGCACCTCCTATTCCTGCAC GAAACCGGATCCAACAACCCTACCGGAATTCCATCAGACATAGACAAGATCCCATTTCACCCATACTACA CTATCAAGGACATTCTAGGAGCCCTACTTATGATATTAATCCTACTGACCCTAGTACTATACTCACCAGA CTCACTAGGAGACCCAGACAACTACACCCCAGCAAACCCACTAAGTACACCACCCCACATTAAACCAGAA TGATATTTCTTATTTGCCTACGCCATCCTACGCTCAATTCCCAATAAGTTGGGCGGAGTGTTGGCTCTGG CAGCCTCTATCCTAGTCCTAATTCTAATACCCATACTACACACATCCAAACAACGAAGCATAATGTTTCG ACCACTGAGCCAATGCCTATTTTGAGTACTAGTTGCAGACCTCATCGCACTAACATGAATTGGAGGACAG CCCGTAGAACACCCATTCATTATTATTGGCCAACTAGCTTCTATTCTGTATTTCCTAATTATCCTAGTAT TAATACCAATTACTAGCATTATCGAGAACAGCCTCTTAAAGTGAAGAGTCTTTGTAGTATATCAAATACC CTGGTCTTGTAAACCAGAAAAGGAGAATGACTCCTCCCTAAGACTCAAGGAAGGAGAACAACTCCGCCAT CAGCACCCAAAGCTGAAATTCTAACTAAACTATTCCCTGATGACTAAAAACAAATCATTCGTGTGCAAGC TAAAATGCCAAGTACCTCCTTACTATCTCTAAAACAAAAAACTTCATAAAAATTCCACATAAACATATAA ATATGTAACTCTAAGAATTTAGCCATTAAAAATTTTTATAACTATAACCCTATGTACGTCGTGCATTAAT TGCTAGTCCCCATGCATATAAGCATGTACATACTATTATTGATATTACATAGTACATATTATTATTGATC GTACATAGCACATTTATGTTAAATAAATCCCAGTCAGCATGCATATCACCACCACTAGATCACGAGCTTA ATTACCATGCCGCGTGAAACCAGCAACCCGCTTGGCAAGGATTTCTCTTCTCGCTCCGGGCCCATCAATC GTGGGGGTTTCTAACTATGAATTTTATCAGGCATCTGGTTCTTACTTCAGGGCCATCTCACCTAAAACCG TCCACTCTTTCCCCTTAAATAAGACATCTCGATGGACTAATGACTAATCAGCCCATGCTCACACATAACT GAGGTTTCATACATTTGGTATTTTTTAATTTTTGGGGATGCTTGGACTCAGCTATGGCCGTCTGAGGCCC TAACACAGTCAAATCAATTGTAGCTGGACTTCATGGCATTCATAATCCGGCACGGCAATCCAAACAAGGT GCTATTCAGTCAATGGTCACAGGACATAACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACAC GTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACAC GTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACAC GTGCGTACACGTGCGTACACGTGCGTACACGTGCGTACACGTGCGCGTAAGCAGGTAAATTGTTGACTTA CTCAAACCCCCCTTACCCCCCAATTAAACTTATGCTCCACACACCCTATAGTGCCTTGCCAAACCCCAAA AACAAAGCAAGATGTGCAAATACAATGAAGCTTAACTAGCATCAAATAACATCTAACAATACCAACCGCA TAGCCCACTATATCTTATAAATCGCTTACTTGAGTGCGTGCTACAAAGGCAGACATCTACCCCCCTAGAT TTTCACGTAAATCTGCACAAATAAATTTAAAATTACAACACAATCCTCTCTCAAAATATACGCACCCGTT TAAGCAAACGCCCATAATTTAAAACAATTTGAA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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