Viewing data for Crocodylus rhombifer
| Scientific name | Crocodylus rhombifer |
| Common name | Cuban crocodile |
| Maximum lifespan | 38.20 years (Crocodylus rhombifer@AnAge) |
| Total mtDNA (size: 16795 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7198 | 9597 | 4708 | 2490 | 4239 | 5358 |
| Base content per 1 kb (bases) | 429 | 571 | 280 | 148 | 252 | 319 |
| Base content (%) | 42.9% | 57.1% | ||||
| Total protein-coding genes (size: 11388 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4963 | 6425 | 3397 | 1566 | 2942 | 3483 |
| Base content per 1 kb (bases) | 436 | 564 | 298 | 138 | 258 | 306 |
| Base content (%) | 43.6% | 56.4% | ||||
| D-loop (size: 1073 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 333 | 740 | 212 | 121 | 336 | 404 |
| Base content per 1 kb (bases) | 310 | 690 | 198 | 113 | 313 | 377 |
| Base content (%) | 31.0% | 69.0% | ||||
| Total tRNA-coding genes (size: 1543 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 661 | 882 | 382 | 279 | 395 | 487 |
| Base content per 1 kb (bases) | 428 | 572 | 248 | 181 | 256 | 316 |
| Base content (%) | 42.8% | 57.2% | ||||
| Total rRNA-coding genes (size: 2577 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1156 | 1421 | 649 | 507 | 526 | 895 |
| Base content per 1 kb (bases) | 449 | 551 | 252 | 197 | 204 | 347 |
| Base content (%) | 44.9% | 55.1% | ||||
| 12S rRNA gene (size: 984 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 466 | 518 | 260 | 206 | 195 | 323 |
| Base content per 1 kb (bases) | 474 | 526 | 264 | 209 | 198 | 328 |
| Base content (%) | 47.4% | 52.6% | ||||
| 16S rRNA gene (size: 1593 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 690 | 903 | 389 | 301 | 331 | 572 |
| Base content per 1 kb (bases) | 433 | 567 | 244 | 189 | 208 | 359 |
| Base content (%) | 43.3% | 56.7% | ||||
| ATP6 (size: 696 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 309 | 387 | 213 | 96 | 177 | 210 |
| Base content per 1 kb (bases) | 444 | 556 | 306 | 138 | 254 | 302 |
| Base content (%) | 44.4% | 55.6% | ||||
| ATP8 (size: 162 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 52 | 110 | 39 | 13 | 43 | 67 |
| Base content per 1 kb (bases) | 321 | 679 | 241 | 80 | 265 | 414 |
| Base content (%) | 32.1% | 67.9% | ||||
| COX1 (size: 1557 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 662 | 895 | 412 | 250 | 436 | 459 |
| Base content per 1 kb (bases) | 425 | 575 | 265 | 161 | 280 | 295 |
| Base content (%) | 42.5% | 57.5% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 279 | 405 | 185 | 94 | 173 | 232 |
| Base content per 1 kb (bases) | 408 | 592 | 270 | 137 | 253 | 339 |
| Base content (%) | 40.8% | 59.2% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 358 | 426 | 231 | 127 | 211 | 215 |
| Base content per 1 kb (bases) | 457 | 543 | 295 | 162 | 269 | 274 |
| Base content (%) | 45.7% | 54.3% | ||||
| CYTB (size: 1165 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 515 | 650 | 355 | 160 | 306 | 344 |
| Base content per 1 kb (bases) | 442 | 558 | 305 | 137 | 263 | 295 |
| Base content (%) | 44.2% | 55.8% | ||||
| ND1 (size: 963 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 434 | 529 | 285 | 149 | 263 | 266 |
| Base content per 1 kb (bases) | 451 | 549 | 296 | 155 | 273 | 276 |
| Base content (%) | 45.1% | 54.9% | ||||
| ND2 (size: 1053 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 465 | 588 | 335 | 130 | 270 | 318 |
| Base content per 1 kb (bases) | 442 | 558 | 318 | 123 | 256 | 302 |
| Base content (%) | 44.2% | 55.8% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 155 | 193 | 102 | 53 | 89 | 104 |
| Base content per 1 kb (bases) | 445 | 555 | 293 | 152 | 256 | 299 |
| Base content (%) | 44.5% | 55.5% | ||||
| ND4 (size: 1374 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 592 | 782 | 413 | 179 | 356 | 426 |
| Base content per 1 kb (bases) | 431 | 569 | 301 | 130 | 259 | 310 |
| Base content (%) | 43.1% | 56.9% | ||||
| ND4L (size: 294 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 130 | 164 | 96 | 34 | 87 | 77 |
| Base content per 1 kb (bases) | 442 | 558 | 327 | 116 | 296 | 262 |
| Base content (%) | 44.2% | 55.8% | ||||
| ND5 (size: 1860 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 818 | 1042 | 581 | 237 | 458 | 584 |
| Base content per 1 kb (bases) | 440 | 560 | 312 | 127 | 246 | 314 |
| Base content (%) | 44.0% | 56.0% | ||||
| ND6 (size: 528 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 232 | 296 | 174 | 58 | 88 | 208 |
| Base content per 1 kb (bases) | 439 | 561 | 330 | 110 | 167 | 394 |
| Base content (%) | 43.9% | 56.1% | ||||
| ATP6 (size: 696 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.03%) 
Alanine (Ala, A)
n = 20 (8.66%) 
Serine (Ser, S)
n = 12 (5.19%) 
Threonine (Thr, T)
n = 25 (10.82%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 9 (3.9%) 
Leucine (Leu, L)
n = 62 (26.84%) 
Isoleucine (Ile, I)
n = 18 (7.79%) 
Methionine (Met, M)
n = 11 (4.76%) 
Proline (Pro, P)
n = 15 (6.49%) 
Phenylalanine (Phe, F)
n = 5 (2.16%) 
Tyrosine (Tyr, Y)
n = 4 (1.73%) 
Tryptophan (Trp, W)
n = 4 (1.73%) 
Aspartic acid (Asp, D)
n = 2 (0.87%) 
Glutamic acid (Glu, E)
n = 4 (1.73%) 
Asparagine (Asn, N)
n = 12 (5.19%) 
Glutamine (Gln, Q)
n = 7 (3.03%) 
Histidine (His, H)
n = 4 (1.73%) 
Lysine (Lys, K)
n = 6 (2.6%) 
Arginine (Arg, R)
n = 4 (1.73%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 13 | 7 | 7 | 8 | 21 | 14 | 10 | 6 | 1 | 0 | 1 | 4 | 4 | 4 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 0 | 3 | 9 | 7 | 1 | 0 | 3 | 3 | 1 | 2 | 1 | 9 | 3 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 12 | 2 | 3 | 2 | 5 | 1 | 0 | 1 | 3 | 1 | 2 | 2 | 2 | 10 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 1 | 0 | 2 | 4 | 2 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 42 | 80 | 73 | 37 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 16 | 71 | 40 | 105 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 38 | 62 | 97 | 35 | ||||||||||||
| ATP8 (size: 162 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPEPWLMISSITWLVFIITLQPKIASMKFMNNPSNPNQKTTKTWSWPQI* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.89%)
Serine (Ser, S)
n = 5 (9.43%)
Threonine (Thr, T)
n = 5 (9.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.89%)
Leucine (Leu, L)
n = 4 (7.55%)
Isoleucine (Ile, I)
n = 6 (11.32%)
Methionine (Met, M)
n = 4 (7.55%)
Proline (Pro, P)
n = 7 (13.21%)
Phenylalanine (Phe, F)
n = 2 (3.77%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 4 (7.55%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 1 (1.89%)
Asparagine (Asn, N)
n = 5 (9.43%)
Glutamine (Gln, Q)
n = 4 (7.55%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 4 (7.55%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 2 | 2 | 0 | 0 | 1 | 0 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 1 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 0 | 1 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 1 | 4 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 3 | 12 | 25 | 14 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 5 | 17 | 15 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 10 | 27 | 12 | ||||||||||||
| COX1 (size: 1557 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 43 (8.3%)
Alanine (Ala, A)
n = 36 (6.95%)
Serine (Ser, S)
n = 35 (6.76%)
Threonine (Thr, T)
n = 38 (7.34%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 39 (7.53%)
Leucine (Leu, L)
n = 54 (10.42%)
Isoleucine (Ile, I)
n = 41 (7.92%)
Methionine (Met, M)
n = 31 (5.98%)
Proline (Pro, P)
n = 31 (5.98%)
Phenylalanine (Phe, F)
n = 47 (9.07%)
Tyrosine (Tyr, Y)
n = 17 (3.28%)
Tryptophan (Trp, W)
n = 17 (3.28%)
Aspartic acid (Asp, D)
n = 14 (2.7%)
Glutamic acid (Glu, E)
n = 9 (1.74%)
Asparagine (Asn, N)
n = 18 (3.47%)
Glutamine (Gln, Q)
n = 12 (2.32%)
Histidine (His, H)
n = 16 (3.09%)
Lysine (Lys, K)
n = 11 (2.12%)
Arginine (Arg, R)
n = 8 (1.54%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 17 | 23 | 8 | 10 | 22 | 3 | 7 | 11 | 1 | 9 | 5 | 22 | 3 | 18 | 29 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 1 | 0 | 7 | 16 | 13 | 0 | 4 | 9 | 24 | 6 | 3 | 8 | 18 | 2 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 17 | 1 | 2 | 8 | 15 | 2 | 0 | 8 | 6 | 11 | 0 | 4 | 7 | 11 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 15 | 8 | 1 | 3 | 11 | 11 | 0 | 1 | 1 | 5 | 1 | 0 | 0 | 1 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 141 | 110 | 147 | 121 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 132 | 98 | 212 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 32 | 170 | 214 | 103 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 10 (4.41%)
Serine (Ser, S)
n = 17 (7.49%)
Threonine (Thr, T)
n = 21 (9.25%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 31 (13.66%)
Isoleucine (Ile, I)
n = 15 (6.61%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 9 (3.96%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 10 (4.41%)
Glutamic acid (Glu, E)
n = 11 (4.85%)
Asparagine (Asn, N)
n = 8 (3.52%)
Glutamine (Gln, Q)
n = 10 (4.41%)
Histidine (His, H)
n = 10 (4.41%)
Lysine (Lys, K)
n = 3 (1.32%)
Arginine (Arg, R)
n = 5 (2.2%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 7 | 10 | 1 | 6 | 16 | 2 | 5 | 8 | 2 | 4 | 2 | 7 | 1 | 5 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 3 | 2 | 2 | 6 | 0 | 1 | 1 | 3 | 3 | 3 | 2 | 9 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 14 | 0 | 4 | 2 | 6 | 0 | 1 | 4 | 6 | 3 | 1 | 1 | 2 | 6 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 10 | 1 | 1 | 9 | 3 | 0 | 0 | 3 | 2 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 53 | 64 | 66 | 45 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 57 | 62 | 83 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 64 | 104 | 45 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (6.92%)
Alanine (Ala, A)
n = 20 (7.69%)
Serine (Ser, S)
n = 16 (6.15%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 34 (13.08%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 13 (5.0%)
Proline (Pro, P)
n = 13 (5.0%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 6 (2.31%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 1 (0.38%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 9 | 9 | 4 | 4 | 15 | 4 | 6 | 6 | 0 | 8 | 4 | 1 | 2 | 6 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 5 | 11 | 4 | 0 | 1 | 7 | 6 | 4 | 1 | 0 | 11 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 8 | 0 | 0 | 1 | 8 | 0 | 0 | 7 | 5 | 6 | 1 | 1 | 3 | 2 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 15 | 7 | 1 | 1 | 3 | 1 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 65 | 68 | 65 | 63 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 65 | 52 | 100 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 18 | 98 | 98 | 47 | ||||||||||||
| CYTB (size: 1165 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.46%)
Alanine (Ala, A)
n = 26 (6.72%)
Serine (Ser, S)
n = 27 (6.98%)
Threonine (Thr, T)
n = 26 (6.72%)
Cysteine (Cys, C)
n = 1 (0.26%)
Valine (Val, V)
n = 17 (4.39%)
Leucine (Leu, L)
n = 67 (17.31%)
Isoleucine (Ile, I)
n = 29 (7.49%)
Methionine (Met, M)
n = 18 (4.65%)
Proline (Pro, P)
n = 25 (6.46%)
Phenylalanine (Phe, F)
n = 27 (6.98%)
Tyrosine (Tyr, Y)
n = 16 (4.13%)
Tryptophan (Trp, W)
n = 12 (3.1%)
Aspartic acid (Asp, D)
n = 11 (2.84%)
Glutamic acid (Glu, E)
n = 6 (1.55%)
Asparagine (Asn, N)
n = 15 (3.88%)
Glutamine (Gln, Q)
n = 8 (2.07%)
Histidine (His, H)
n = 12 (3.1%)
Lysine (Lys, K)
n = 9 (2.33%)
Arginine (Arg, R)
n = 11 (2.84%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 18 | 15 | 8 | 10 | 28 | 6 | 15 | 7 | 1 | 1 | 7 | 8 | 1 | 6 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 0 | 4 | 13 | 9 | 0 | 0 | 3 | 18 | 4 | 3 | 4 | 17 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 9 | 2 | 4 | 9 | 10 | 1 | 1 | 2 | 4 | 12 | 0 | 0 | 2 | 13 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 6 | 0 | 1 | 10 | 7 | 2 | 0 | 3 | 6 | 2 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 85 | 108 | 100 | 95 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 101 | 77 | 158 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 146 | 167 | 52 | ||||||||||||
| ND1 (size: 963 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (5.0%)
Alanine (Ala, A)
n = 29 (9.06%)
Serine (Ser, S)
n = 25 (7.81%)
Threonine (Thr, T)
n = 30 (9.38%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 16 (5.0%)
Leucine (Leu, L)
n = 65 (20.31%)
Isoleucine (Ile, I)
n = 24 (7.5%)
Methionine (Met, M)
n = 11 (3.44%)
Proline (Pro, P)
n = 17 (5.31%)
Phenylalanine (Phe, F)
n = 19 (5.94%)
Tyrosine (Tyr, Y)
n = 11 (3.44%)
Tryptophan (Trp, W)
n = 8 (2.5%)
Aspartic acid (Asp, D)
n = 3 (0.94%)
Glutamic acid (Glu, E)
n = 10 (3.13%)
Asparagine (Asn, N)
n = 10 (3.13%)
Glutamine (Gln, Q)
n = 7 (2.19%)
Histidine (His, H)
n = 4 (1.25%)
Lysine (Lys, K)
n = 7 (2.19%)
Arginine (Arg, R)
n = 7 (2.19%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 15 | 10 | 5 | 5 | 28 | 9 | 14 | 5 | 2 | 3 | 7 | 3 | 3 | 10 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 1 | 5 | 12 | 12 | 0 | 3 | 7 | 4 | 2 | 1 | 8 | 6 | 2 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 13 | 3 | 4 | 5 | 7 | 4 | 3 | 2 | 4 | 7 | 0 | 4 | 0 | 10 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 6 | 4 | 2 | 1 | 6 | 1 | 1 | 1 | 4 | 1 | 0 | 1 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 82 | 88 | 77 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 96 | 52 | 135 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 37 | 107 | 126 | 51 | ||||||||||||
| ND2 (size: 1053 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.43%)
Alanine (Ala, A)
n = 28 (8.0%)
Serine (Ser, S)
n = 30 (8.57%)
Threonine (Thr, T)
n = 44 (12.57%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 16 (4.57%)
Leucine (Leu, L)
n = 65 (18.57%)
Isoleucine (Ile, I)
n = 33 (9.43%)
Methionine (Met, M)
n = 11 (3.14%)
Proline (Pro, P)
n = 18 (5.14%)
Phenylalanine (Phe, F)
n = 15 (4.29%)
Tyrosine (Tyr, Y)
n = 8 (2.29%)
Tryptophan (Trp, W)
n = 10 (2.86%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 8 (2.29%)
Asparagine (Asn, N)
n = 12 (3.43%)
Glutamine (Gln, Q)
n = 14 (4.0%)
Histidine (His, H)
n = 6 (1.71%)
Lysine (Lys, K)
n = 12 (3.43%)
Arginine (Arg, R)
n = 6 (1.71%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 15 | 8 | 12 | 9 | 27 | 6 | 8 | 12 | 2 | 2 | 4 | 6 | 4 | 1 | 14 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 4 | 15 | 8 | 1 | 2 | 4 | 5 | 1 | 1 | 6 | 11 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 20 | 4 | 5 | 13 | 6 | 2 | 0 | 4 | 3 | 5 | 3 | 3 | 4 | 8 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 5 | 3 | 0 | 1 | 12 | 0 | 0 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 65 | 98 | 116 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 116 | 62 | 140 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 32 | 121 | 140 | 58 | ||||||||||||
| ND3 (size: 1053 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.43%)
Alanine (Ala, A)
n = 28 (8.0%)
Serine (Ser, S)
n = 30 (8.57%)
Threonine (Thr, T)
n = 44 (12.57%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 16 (4.57%)
Leucine (Leu, L)
n = 65 (18.57%)
Isoleucine (Ile, I)
n = 33 (9.43%)
Methionine (Met, M)
n = 11 (3.14%)
Proline (Pro, P)
n = 18 (5.14%)
Phenylalanine (Phe, F)
n = 15 (4.29%)
Tyrosine (Tyr, Y)
n = 8 (2.29%)
Tryptophan (Trp, W)
n = 10 (2.86%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 8 (2.29%)
Asparagine (Asn, N)
n = 12 (3.43%)
Glutamine (Gln, Q)
n = 14 (4.0%)
Histidine (His, H)
n = 6 (1.71%)
Lysine (Lys, K)
n = 12 (3.43%)
Arginine (Arg, R)
n = 6 (1.71%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 15 | 8 | 12 | 9 | 27 | 6 | 8 | 12 | 2 | 2 | 4 | 6 | 4 | 1 | 14 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 4 | 15 | 8 | 1 | 2 | 4 | 5 | 1 | 1 | 6 | 11 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 20 | 4 | 5 | 13 | 6 | 2 | 0 | 4 | 3 | 5 | 3 | 3 | 4 | 8 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 5 | 3 | 0 | 1 | 12 | 0 | 0 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 65 | 98 | 116 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 116 | 62 | 140 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 32 | 121 | 140 | 58 | ||||||||||||
| ND4 (size: 1374 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (4.81%)
Alanine (Ala, A)
n = 30 (6.56%)
Serine (Ser, S)
n = 41 (8.97%)
Threonine (Thr, T)
n = 53 (11.6%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 16 (3.5%)
Leucine (Leu, L)
n = 92 (20.13%)
Isoleucine (Ile, I)
n = 36 (7.88%)
Methionine (Met, M)
n = 34 (7.44%)
Proline (Pro, P)
n = 22 (4.81%)
Phenylalanine (Phe, F)
n = 14 (3.06%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 11 (2.41%)
Aspartic acid (Asp, D)
n = 7 (1.53%)
Glutamic acid (Glu, E)
n = 7 (1.53%)
Asparagine (Asn, N)
n = 9 (1.97%)
Glutamine (Gln, Q)
n = 18 (3.94%)
Histidine (His, H)
n = 10 (2.19%)
Lysine (Lys, K)
n = 8 (1.75%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 13 | 28 | 14 | 11 | 42 | 6 | 16 | 17 | 1 | 2 | 3 | 8 | 3 | 7 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 5 | 1 | 18 | 7 | 4 | 2 | 8 | 11 | 1 | 1 | 8 | 11 | 2 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 23 | 3 | 3 | 13 | 12 | 2 | 1 | 10 | 5 | 8 | 6 | 3 | 3 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 6 | 1 | 0 | 7 | 8 | 0 | 1 | 0 | 7 | 1 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 82 | 132 | 151 | 93 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 58 | 135 | 73 | 192 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 39 | 146 | 202 | 71 | ||||||||||||
| ND4L (size: 294 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.12%)
Alanine (Ala, A)
n = 8 (8.25%)
Serine (Ser, S)
n = 10 (10.31%)
Threonine (Thr, T)
n = 11 (11.34%)
Cysteine (Cys, C)
n = 3 (3.09%)
Valine (Val, V)
n = 2 (2.06%)
Leucine (Leu, L)
n = 24 (24.74%)
Isoleucine (Ile, I)
n = 7 (7.22%)
Methionine (Met, M)
n = 3 (3.09%)
Proline (Pro, P)
n = 2 (2.06%)
Phenylalanine (Phe, F)
n = 6 (6.19%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.03%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 2 (2.06%)
Asparagine (Asn, N)
n = 7 (7.22%)
Glutamine (Gln, Q)
n = 1 (1.03%)
Histidine (His, H)
n = 3 (3.09%)
Lysine (Lys, K)
n = 1 (1.03%)
Arginine (Arg, R)
n = 2 (2.06%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 4 | 2 | 1 | 6 | 9 | 4 | 3 | 1 | 0 | 0 | 1 | 1 | 0 | 3 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 2 | 1 | 1 | 6 | 1 | 0 | 0 | 3 | 0 | 1 | 1 | 1 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 5 | 0 | 3 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 4 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 16 | 28 | 29 | 25 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 10 | 31 | 15 | 42 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 37 | 33 | 20 | ||||||||||||
| ND5 (size: 1860 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (4.2%)
Alanine (Ala, A)
n = 50 (8.08%)
Serine (Ser, S)
n = 63 (10.18%)
Threonine (Thr, T)
n = 62 (10.02%)
Cysteine (Cys, C)
n = 4 (0.65%)
Valine (Val, V)
n = 19 (3.07%)
Leucine (Leu, L)
n = 100 (16.16%)
Isoleucine (Ile, I)
n = 63 (10.18%)
Methionine (Met, M)
n = 37 (5.98%)
Proline (Pro, P)
n = 29 (4.68%)
Phenylalanine (Phe, F)
n = 28 (4.52%)
Tyrosine (Tyr, Y)
n = 17 (2.75%)
Tryptophan (Trp, W)
n = 7 (1.13%)
Aspartic acid (Asp, D)
n = 13 (2.1%)
Glutamic acid (Glu, E)
n = 15 (2.42%)
Asparagine (Asn, N)
n = 22 (3.55%)
Glutamine (Gln, Q)
n = 19 (3.07%)
Histidine (His, H)
n = 12 (1.94%)
Lysine (Lys, K)
n = 23 (3.72%)
Arginine (Arg, R)
n = 10 (1.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 27 | 36 | 28 | 9 | 18 | 40 | 17 | 14 | 15 | 4 | 2 | 4 | 11 | 2 | 9 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 9 | 1 | 3 | 8 | 23 | 17 | 2 | 2 | 10 | 10 | 4 | 3 | 10 | 16 | 0 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 30 | 20 | 2 | 4 | 18 | 24 | 1 | 2 | 14 | 5 | 12 | 1 | 2 | 4 | 18 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 13 | 2 | 2 | 11 | 20 | 3 | 0 | 4 | 4 | 2 | 0 | 0 | 1 | 0 | 6 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 123 | 154 | 223 | 120 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 63 | 188 | 122 | 247 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 51 | 239 | 239 | 91 | ||||||||||||
| ND6 (size: 528 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (15.43%)
Alanine (Ala, A)
n = 13 (7.43%)
Serine (Ser, S)
n = 12 (6.86%)
Threonine (Thr, T)
n = 5 (2.86%)
Cysteine (Cys, C)
n = 7 (4.0%)
Valine (Val, V)
n = 25 (14.29%)
Leucine (Leu, L)
n = 27 (15.43%)
Isoleucine (Ile, I)
n = 6 (3.43%)
Methionine (Met, M)
n = 8 (4.57%)
Proline (Pro, P)
n = 1 (0.57%)
Phenylalanine (Phe, F)
n = 14 (8.0%)
Tyrosine (Tyr, Y)
n = 7 (4.0%)
Tryptophan (Trp, W)
n = 5 (2.86%)
Aspartic acid (Asp, D)
n = 5 (2.86%)
Glutamic acid (Glu, E)
n = 4 (2.29%)
Asparagine (Asn, N)
n = 1 (0.57%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 2 (1.14%)
Lysine (Lys, K)
n = 2 (1.14%)
Arginine (Arg, R)
n = 4 (2.29%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 1 | 4 | 4 | 1 | 3 | 2 | 10 | 0 | 0 | 9 | 1 | 3 | 12 | 12 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 6 | 1 | 6 | 2 | 3 | 2 | 6 | 5 | 6 | 10 | 0 | 0 | 0 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 1 | 1 | 3 | 0 | 1 | 0 | 7 | 1 | 7 | 0 | 3 | 7 | 1 | 0 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 3 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 17 | 31 | 54 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 23 | 21 | 80 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 48 | 18 | 36 | 74 | ||||||||||||
| Total protein-coding genes (size: 11468 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 213 (5.57%)
Alanine (Ala, A)
n = 284 (7.43%)
Serine (Ser, S)
n = 298 (7.8%)
Threonine (Thr, T)
n = 351 (9.19%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 191 (5.0%)
Leucine (Leu, L)
n = 650 (17.01%)
Isoleucine (Ile, I)
n = 305 (7.98%)
Methionine (Met, M)
n = 201 (5.26%)
Proline (Pro, P)
n = 200 (5.23%)
Phenylalanine (Phe, F)
n = 216 (5.65%)
Tyrosine (Tyr, Y)
n = 115 (3.01%)
Tryptophan (Trp, W)
n = 100 (2.62%)
Aspartic acid (Asp, D)
n = 73 (1.91%)
Glutamic acid (Glu, E)
n = 92 (2.41%)
Asparagine (Asn, N)
n = 127 (3.32%)
Glutamine (Gln, Q)
n = 108 (2.83%)
Histidine (His, H)
n = 96 (2.51%)
Lysine (Lys, K)
n = 89 (2.33%)
Arginine (Arg, R)
n = 73 (1.91%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 147 | 158 | 151 | 75 | 91 | 264 | 77 | 115 | 94 | 14 | 40 | 39 | 77 | 35 | 85 | 131 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 50 | 12 | 17 | 47 | 135 | 92 | 10 | 22 | 61 | 93 | 37 | 20 | 49 | 118 | 13 | 51 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 134 | 147 | 19 | 37 | 75 | 103 | 13 | 15 | 55 | 49 | 66 | 20 | 28 | 32 | 95 | 22 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 74 | 73 | 19 | 14 | 59 | 79 | 10 | 4 | 19 | 42 | 8 | 0 | 2 | 8 | 1 | 80 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 853 | 984 | 1145 | 840 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 487 | 1063 | 709 | 1563 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 356 | 1258 | 1536 | 672 | ||||||||||||
>NC_024513.1 Crocodylus rhombifer mitochondrion, complete genome CAAAGGTTTAGTCCTGACCTTATTATTAGCTATTGCTCAACTTACACATGCAAGCATCAACGCCCCAGTG AGAACACCCCAAATAGCCCAACTAAGGGACACGGAGCCGGCATCAGGCACATTAACACTATAGCCCACGA CGCCTAGCCTACGGCCACACCCCCATGGGATACAGCAGTGATTAACATTAAACCATAAGCGAAAGCTTGA TTTAGTTAGAGCGCAAAGGGGCGGCCAATCTCCGTGCCAGCAGCCGCGGTTACACAGCTACAGCCCCAAG TTAATAAAAACGGCGTAAATTGTGGCTAAGATCAAATCTACTAAGTTAAGGCGAAAAGCTTGTCAAGCCG TGAAAAGCTAAAAACCTGCCAAAAACGCCAATATTAACATAGCCTTAACCAACAAGACACACCCGAACCC ACGAAAGCTGGGGTACAAACTAGGATTAGATACCCTACTATGCCCAGCCCTCAACAAAGGTGTACTAACC ACACACTACACTCGCCAGGGGATTACGAGCAACTTGCTTAAAACTCAAAGGACTTGACGGTATTTCGAAC CCACCTAGAGGAGCCTGTCCTATAATCGACAATACACGATCCACCCAACCACCTTTTGCCCTAAGCAGCC TGTATACCGCCGTCGCAAGCTTAGCCCATGAGGGACAAGAACCTAGCACAATAACTCACTTCTGAGCTAG TACGTCAGGTCAAGGTGCAGCCAATAAGTTGGTAGAGATGGGCTACATTTTCTACACCATAGAAATTGGT CACGGAGAGGCCTGTGAAACCAGGACTGTCAAAGACGGATTTAGCAGTAAATTAGGAGAAGAGTGCCTAG TTGAAGATGGCCCCGGAATATGTACACACCGCCCGTCACCCTCCTCGAATTTAACCCAATTTTTGCTACA TAACGCACATAGAATTCAATGAGATGAGGAAAGTCGTAACAAGGTAAGCGTACCGGAAGGTGTGCTTGGA ACATCAAAATGTAGCTTAAACCAAAGCATTCTGCTTACACCTGAAACATGTTTACCTAAATAAACCATTT TGATCAACCCGCCCTAGCCCTTAAAATCAACCCAAATAAAGTTAACTACACTAAACCAAAACATTTTTAT GCCTAAGTATCGGCGAGAGAAAAGACAATAGGCGCAATAGAGACAGTACCGCAAGGGAAAGATGAAATAA AAATTTAACACAAAAGTACAACACAGCAAAGATTAACCCTTTTACCTTTTGCATTATGGTTTAGCCAAAC ATAATCGTGGCAAGGAGCACTAAAGTCACTTACACCCGAATCTGGGCGAGCTACTAGCCAGCAGAAGTAA CACAGCACCAACCCATCTCTGTAGCAAAAGAGCGGGAAGACTGCCTAGTAGAAGTGAAAAGCCTAACGAG CCCAGTGATAGCTGGTTGCTTGGGAACAGAATATAAGTTCTACTGAAAGCCTTCTGACTCACCAAGACAA AGGACAAAGAAAGCTTTCAAGCTATTTAATGGGGGTACAGCCCCATTAACACAGGACTCAACCTCTACCT AAGGGTAAAACTAACTCGCACTTTAAATGTAGGCTTTAAAGCAGCCAGCACAACGAAAGCGTCAAAGCTC GCACCAAAAAATACCTACAACAAAATTAAACCCTACAGCACAACCAAGCCTTTCTAAAACATTAGAAGAG ATTATGCTAAAATTAGTAATAAGAAACTTGATCTTCTCCTGGGCGCCAGCCTACACTACTCATGACACAC TATTGGTAATTAACACCCTGCCCATCTACCACAAACATAAGGGCCACACACTGTTAACCCAACACAGGAG CGCAACAGGAAAGGCTAAACCCTGCAAAAGGAACTCGGCAAACAAAGATTCCGACTGTTTACCAAAAACA CAGCCCCCAGCTAGCCAAGTATTGGGGGTGATGCCTGCCCAATGACTTTAAGTTAAATGGCCGCGGTATC TACAACCGTGCGAAGGTAGCGTAATCATTTGTTCTTTAAATAAGGACCAGTATGAAGGGCTAAACGAGAA TCTATCTGTCTCTTGCAGAAGGCCAGTGAAATTGATCTCCCTGTGCAAAAGCAGGGATGTCAACATTAGA CGAGAAGACCCTGTGAAACTTTAAACCACTAAATCACAAAAAATTGTAAAATCTCACCCCAAGCGGGCTG ACTACAATTAGCACGTTGATTTAGCGTTTTCGGTTGGGGCGACCCCAAAATAAAAAAAACTTTCCAGGAA AACAGTAACATGACAATTACTAACCAAGACCCACACCACAAAGTGCTTAAATGTAATCAGATCCGGCACA CGCCGATTCATGAACCAAGCTACTCCAGGGATAACAGCGCAATCCCCTTCAAGAGCCCGTATCGACAAGG GGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGTAACCGCTATTAATGGTTCGTTTGTTCA ACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTATCTATGAATGCGA ACCTTTCTAGTACGAAAGGACCGAAAGAGCAAGGCCCATGCCACTAAAGTAAGCCTTACCTAAAGCTTAA TGAAAACAACTAAATTAACAACCAGGACAATCACACCCCGCCTCAATACAAGAGGAAGCTGGGTTGGCAG AGCCTGGTTTAATGCAAAAGACCTAAGCCCTTTACCCAGAGATTCAAATTCTCTACTCAGCAATAAGTTT TTTAACAACCACGCCCATCCTTATCTACATCATCTCAGTCCTAATCGCAGTTGCATTCCTAACGGGACTA GAACGAAAAATCATTGGCTATATACAGCTACGTAAAGGCCCCAACATTGTCGGCCCCCTTGGACTGCTAC AGCCATTCGCCGATGGCCTCAAGCTTATTATCAAAGAGCTAACACTGCCCCTACTCGCCACCCCTGCTTT ATTTATTTTATCCCCCGCAGTCGCCCTCATTTTATCCCTAATTATATGAACCCCCCTGCCCGTGCCATTT TCTATCGCCCATCTAAACCTCGGCATGCTATTTTTATTAGCCATATCCAGCTTAGCAGTCTACTCGCTAT TGTGATCCGGGTGAGCATCAAACTCTAAATACGCCCTAATAGGCGCCTTACGAGCAGTAGCCCAAACCAT CTCCTACGAAGTCACATTAGCCATCATTGTTCTATCTATCGTCCTACTTAGTGGTGGATTTTCACTACAC GCACTAGCTGTGACCCAAGAACCCACCTACTTGGCTCTAACCACGTGACCATTACTAATAATATGATATA CCTCAACATTAGCAGAAACAAACCGCGCCCCGTTTGACCTCACAGAGGGTGAGTCAGAACTAGTATCTGG CTTCAACGTTGAGTATAGCGCAGGGCTATTCACACTATTTTTTCTGGCTGAATACGCTAACATCCTGCTA ATAAACATTTTAACCACCATCTTATTCCTAAACACAACAACAAACCTGCAAACACAAACATTATTCACCA CCGCCCTAATAAGTAAATCGATTCTACTAACCATCGGATTCCTATGAGTCCGAGCATCATACCCGCGATT TCGGTATGATCAATTGATACACCTACTGTGAAAAAACTTCTTGCCAGCCACCCTGGCAATCTGCCTGTGA CACTCGTCGTTCCCAGTGTCAACATTTGGTCTTCCAGTAGCAAGGATTCGTGCCTGAACGCCAAAGGGCT ACTTTGATGAGGTAGAAAGTGGAGGTTAAAATCCTCCCGAATCCTAGAGGAGCAGGGGTTGAACCTGCAC AAAAGAATCCAAAATTCTTCCTACTTCCATTGTAGTATCCCCTAACAGAAGAGTAAGCTAACTAAAGCTA TTGGGTCCATACCCCAACAATGAGGGGCAATCCTTCCTCTCCTAACTCATGCCCATCTTCCAGCCCGTCA TCTTAACTACACTAACTATTACAACACTCATTTTCCTATCCTCCACCCACCTGGTGCTCATATGGGTAGC ACTAGAACTTAGCACATTAGTAGTTCTGCCATTAATTGCCAATAAATCGCACCCACGATCCGTTGAAGCT CACAAAAATACTCCTCACACAGGCCACCGCTTCTGCCTGATCATCTTCTCATGGACGTTAAACTATATCA CAACCGGGGGTGGCCAAATTACAGAAGTAACAAACCAAACACTTACAACCATTACGGCCCTAGCCCTGTT TATTAAAATTGGATTAGTGCCATTCCACTTCTGAGTGCCCGAAACCATTCAAGGAATAACTCCAACCGCC TCCATCTTCCTACTTACCTGACAAAAACTAGGTCCACTAATTATACTGTACCTAATGAGCCCACTAATTA ATTTCGAGGTCCTCTCTGCAGTATCTATCCTATCCGCCACAATTGCTGGCTGACTTGGACTTAACCAAAC CCAAATCCGAAAACTAGTAGCATTATCTTCAATTGCCCAAATAGCCTGAACCCTGGTGATTATCAAATAC GCACCATCACTTACAATCCTAGCCTTCTATTTGTACTCAATCACAATTTCCACCACGCTTCTCACACTAG AAAAACTTTCAACAACATCCATTAACAACCTCCTACTTTCGTTCCAAAAAGCCCCAATTACTTCCCTACT ATTGACGATCTCTTTATTGTCCCTATCAGGACTACCCCCACTAGCCGGCTTCCTACCAAAATGACTAACA ATCGACCAGCTCGTAGCAGAGGGAGCAATTTGAGTCGCATTCACAATACTCATGGCCTCTCTTCTAAGCC TTTTCTTCTACCTCCGACTATGGTACAACTCCGCATCCACCCTTCCCCCCAACACTGCTAATACCCAACG ACTATGACGCAAACCAGTCCAACAAACCAGCCTCACAATCAACTCCCTAGCTATAGCCGCCCTAACCTTA ATCCTAGCGGCCACCATAATAAAAGCCATTACAAAACAAGAGTCCTATTAAAAGAAATTAGGTTCAATCT TCAAGCCAAGGGCCTTCAAAGCCCTAGATAGGAGTTAACAATCTCCTATTTCTTGAGTAAGGTTTATAGG GTTTTATCCTATATCTTCTGAATGCAAATCATAGACTTTTATTAAGCTAAAACCTCACTAGGCAAATGGG CCTCGATCCCATAAATTATTAGTTAACAGCTAATTACTCTAACCGGCTAGTTTTTACCTAAATCTTAAGC CCAGGTACAATTTAAAGTACATCTACGAGTTTGCAGTTCGTCGTGAATTTCACTACAGAGCCTGGTAAAA AGAGGATTTGAACCTCTGTAAATAGGTTTACAGCCCACTGCCATCACACTCGGCCATTCTACCAGTGAAT ATTAATCGTTGACTTTTTTCCACTAACCACAAAGATATTGGCACCTTGTACTTTATTTTCGGCGCCTGAG CCGGAATAGTAGGCACAGCCATAAGCCTATTAATCCGAACAGAGCTCAGCCAGCCGGGTCCCTTCATAGG AGATGACCAAATTTACAATGTCATTGTTACAGCACATGCCTTTATCATAATTTTCTTTATAGTTATACCA ATCATGATCGGGGGATTTGGAAATTGACTACTCCCATTAATAATTGGAGCACCCGACATAGCATTCCCTC GCATAAACAACATAAGCTTCTGATTGCTGCCCCCATCATTTACCCTACTCCTCTTTTCCGCCTTTATTGA AACTGGGGCTGGCACCGGATGAACAGTCTACCCACCTCTAGCTGGAAACCTAGCCCACGCCGGACCATCA GTAGACCTCACTATCTTCTCCCTTCACCTTGCTGGAGTGTCATCCATCCTTGGAGCAATTAATTTTATTA CCACAGCTATCAACATAAAACCCCCAGCAATGTCACAACAACAAACGCCCCTTTTTGTATGATCTGTTCT AGTTACAGCTGTTCTCCTATTGCTATCACTACCCGTCCTAGCTGCAGGGATTACTATATTACTCACTGAC CGAAACTTGAACACCACTTTCTTCGACCCGGCAGGAGGAGGAGACCCAATCCTATACCAACACCTTTTCT GATTCTTCGGCCACCCAGAAGTATATATCCTTATCCTGCCAGGGTTTGGAATAATTTCCCACGTAATTAC CTTCTACTCAAGCAAAAAAGAACCATTTGGTTATATAGGAATAGTATGAGCCATAATGTCAATTGGCTTC CTTGGCTTCATTGTCTGAGCCCACCACATGTTTACAGTAGGAATAGATGTTGACACTCGAGCATACTTCA CATCCGCCACAATGATTATCGCCATCCCCACTGGTGTAAAAGTATTCAGCTGATTAGCCACTATTTATGG GGGAGTAGTAAAATGACAAGCCCCCATGCTATGAGCACTCGGCTTCATTTTCTTATTCACAGTAGGAGGA CTAACAGGAATTGTACTAGCTAACTCGTCACTGGACATTATTCTCCACGACACCTACTACGTAGTAGCCC ACTTCCACTATGTGCTATCTATGGGAGCAGTATTCGCCATCATAAGCGGATTCACCCACTGATTCCCATT ATTTACAGGATTCACCCTACACAGCACATGAACAAAAATTCAATTCATGATCATATTTACAGGTGTAAAC CTAACCTTCTTCCCACAACACTTCCTAGGCCTATCAGGAATACCACGACGGTATTCAGACTACCCAGACG CATATGCCTTCTGAAATATAATCTCCTCGATTGGGTCATTAATCTCCATAGTATCAGTTATCCTACTCAC ATTTATTGTATGAGAAGCATTTTCATCAAAACGAAAAGTTCAAGTACCTGAAATAGCAAGCACAAATGTA GAATGACTAAACAACTGTCCACCATCATACCACACCTACGAAGAACCAGTCTTTGTTCAAGTACAACCAA AACTAAAATAAGCACAACCACAACCTAATGCCAAGGACAGGGGGAATTGAACCCCCACCATTTGGTTTCA AGCCAAGCGCAATACGACATGCTCTGTCCTCCAAGAAGAGTTAGTATACACATATTACCCGCCCTTGTCA AGGGCAAAATATAGGATCAAACCCCTTTACTCTTCTATGGCAAATCCAATACACCTAGGACTCCAAGACG CAATATCCCCATTAATAGAAGAACTCCTCTATTTTCATGACCACACACTAATAATTATTTTTCTAATCAG CATGTTTGTACTCTATACAATCTCAGTTTTATTGCTAACAAGCCTATACCACACAAATGCAACAGATGTA CAAGAAATAGAAATAATCTGAACTATTCTACCAGCCCTAATCCTAATTACCATCGCCCTTCCATCTCTGC GCACACTATACCTCATAGACGAAACCACCAACCCATGCCTAACCATTAAAGTAATTGGACATCAATGGTA TTGAACATATGAATATACAGACTTTTCACAGCTGGAGTTCGACTCTTACATACTACCAACACAAGACCTA CCTCAAGGTCATTTCCGCCTCCTAGAAGTAGACCACCGCATGGTTGTCCCAACAAACTCAAGCACTCGAA CATTAATTACAGCTGAAGACGTCCTACACTCATGAGCAGTGCCATCCTTAGGAATCAAAATAGACGCAGT ACCCGGGCGACTAAACCAAACCTCACTAACATCTCCCAACCCTGGGGTTTTCTATGGCCAATGCTCTGAA ATCTGCGGGGCAAACCATAGTTTTATGCCTATTGTTGTAGAAGCTGTACCAATACAGCATTTCCAAAGCT GATTAAAAACAAACTCATAACCACTAAGAAGCTAAACCGGCCAAAGCCCTAGCCTTTTAAGCTAGCATTG GGGACCACGCCAACCCCCTTAGTGACATGCCACAATTAAACCCAGAACCTTGATTAATGATCTCATCCAT TACATGGCTAGTATTCATTATTACTTTACAACCAAAAATTGCTTCTATAAAGTTTATAAATAACCCAAGC AACCCAAACCAAAAAACTACTAAAACATGATCCTGGCCACAAATCTAAATCTATTTGACCAATTCTTAGT GCCTAAGCTATTTGGCATATCACTATTAATCCCAGCCATATTGCTAACGACACTGCTAATTTATAACCCA CAAGACCGCTGACTGTCGAACCCTTTAACAACCCTACAAGCCTGGCTAATTGCAAAAACCACTAAACAAA TCATAACCCCAGTGAACAAACCGGGACATAAGTGATCATTAATGCTGGTCTCACTATTAACAATGCTTAT TCTAAACAACCTTTTAGGCCTTCTCCCATATACATTTACACCAACAACTCAGCTGTCTATAAACATAGCC CTGGCCTTACCACTATGGCTGGCAACAGTACTAATTGGCCTACGAAACAAACCGGCTTCTTCACTAGCCC ACCTCCTGCCAGAAGGGACCCCGACACCCCTTATCCCAATCTTAATCTTAATCGAGACAATCAGCCTGCT CATCCGACCAATCGCACTCGCCGTGCGACTTACAGCCAACCTCACCGCAGGACATCTTTTGATACACCTA ATCTCTACTGCTGCACTCAACCTAGTGACAACTTCCACGCTACTTGCTGGACTAACCCTGTCCATCCTGG CCCTGTTAATACTCCTGGAAATTGCGGTAGCAATGATCCAAGCATATGTATTTACCCTACTACTCTCACT ATACCTGCAAGAAAACGTATAATGACCCACCAAATACACCTATTTCACATGGTTAACCCAAGCCCGTGAC CAATTTTAGGGGCTATGGCTGCCATAATACTAACAGCCGGATTAATCCTATGATTCCACTGTAATTTAAG CCTAGTTTTACTTATAGGACTAATCTCAACCTTGCTGATTATATTTCAATGATGACGAGACGTTGTCCGA GAAAGCACCTATCTAGGCCACCATACCCCACCAGTCCAAAAAGGACTACGATATGGTATAATCCTCTTTA TCACCTCAGAGGTCTTCTTTTTCCTTGGATTTTTCTGAGCATTCTACCACTCAAGCCTGGCTCCAACCCC AGAACTGGGGGGACAATGGCCACCAACCGGAATTACCACATTAGACCCATTCGAAGTTCCACTCCTCAAT ACAGCAGTTCTACTAGCCTCAGGGGTTACTGTGACATGAGCCCACCACAGCCTAATGGAAGCCAACCGAA CACCTGCCATCCACGCCTTAACTCTTACAATTATTCTAGGGCTATACTTCACTGCTCTTCAAGCAATAGA ATATTACGAAGCCCCATTCACCATCGCAGACAGCAGCTATGGCTCAACCTTCTTCGTTGCCACAGGCTTT CACGGCCTACATGTTATTATTGGCTCAACATTCCTGATAACCTGCCTCTACCGACAAATCATACACCACT TCACCTCAAATCACCACTTCGGCTTCGAAGCCGCCGCTTGATACTGACACTTCGTAGATGTGGTCTGACT ATTCCTATACATCTCAATCTATTGATGAGGCTCCTGCTCTTCTAGTATTGACAATACAAATGACTTCCAA TCATTAAACCCTGGTATCAACCTCAGGGAAGAGCAATAAACCTACTTACTGCATTCATATTAGCCACAGC CACTGCAGTAGCCGTAATTACCTTAAACCTACTGATATCAGAAATGACCCCAGACCCCGAAAAACTCTCA CCATATGAGTGCGGATTCGACCCGCTAGGATCCGCCCGCCTGCCACTATCTATCCGCTTTTTCATAATCG CCATCTTATTCCTGCTATTTGACCTAGAGATCGCCATTCTACTACCACTAGCATGAGCCCTTCAACTCAC AAACCTGATCAAAAGCATCACATGAGCCATCATTATCTTCTTACTCATATTTGCAGGTCTAACGTACGAA TGACTACAAGGCGGACTAGAATGAGCAGAATAGCCTTTAACCAAAGGAGCTAGTCCAAGCTAAGACTTCT AGCTTCGGCCTAGAAAATCATGACCAACTTCATGGCTCCCTATTGACCTCCCCCACCAATCTACTGTTTA CCCTTTCTTTCATCATCTTCACCATTGGGTTTACCTTCCGCCACACTCATCTCCTCTCAGCCCTATTATG CCTGGAAGGCATGATATTGTCAGTATTTCTATTAATAGCAACATGGTCTCTAAACTCAAACATCTCATCT CTCATCCTGCCTTTAACAGTCCTAACACTATCAGCCTGTGAAGCTGGCATTGGCCTCGCCCTACTAATTG CCTCAGCCCGAACACATAATACAGCCAACCTCAAAAACCTAAATCTGCTCCAATGTTAAAAATCATTGTA CCCACAATAATACTAATTCCCTCAACCTGCCTAACAACCACAAAAAACACCTGACTATCACCGACAGCCT ACTCAACAGTTATTATTATCCTAGGCATACTTGTCTTAAACCCCGGAGACATTCTGGTAAATACTAGTGG TTTATTATTAGGAAGCGACCAAATTTCAACACCCCTACTTATACTATCCTGCTGACTACTTCCATTAATA TTTATAGCCAGCCAAAGCTCCATATCACACGACCCAACCCAACAAAAACGGCTATTTATTACAGCCCTAG CCCTCCTACAATTGGCCCTAATATTAGTATTCATGGCCCTAGACCTGATACTATTTTACACCGCCTTTGA AGCGACCCTCATTCCAACCCTAATAGTGATCGCCCGATGAGGCTCCCAAACAGAACGACTCGGAGCCGGA CTATACTTCCTCCTATACACCATCACTAGCTCTATACCGCTTCTAATTGCGCTTCTCTGGGTCTATAACA TAAAAGGAACTACATCCATTACACTTTTACAACTATTACCACAAATAACCCTAATATTCTGGACAAGCAC GTTACTGTGAACCTCCCTTATATTGGCCTTCCTAGTAAAAATCCCAATTTACGGCCTTCACCTATGGCTA CCAAAAGCCCACGTAGAAGCCCCCATTGCCGGATCCATAGTCCTTGCAGCGATCCTATTAAAACTCGGGG GCTATGGCCTGCTACGAATTACAAACCTACTAACTGAACAAACCACATCCTCTTATATCCTTCCCCTAAC AGTGGCACTATGGGGTGCACTCATAACTGGCATAATCTGCTTACGACAAACAGACTTAAAATCCCTAATT GCCTACTCCTCAGTAAGCCACATGGGACTAATAACAAGCTCGATCCTCACTCGTAATCAACTAGCCCCCT CAGGCTCAATAATTATAATAGTGGCCCACGGCCTTACATCCTCAATACTATTCTGCTTGGCAAATATCAC CTATGAACGAACACACTCACGAACCCTACTACTAACGCAAGGAGTACAACTCGCCACCCCAATCATGACA TCCTGATGGCTTCTGGCCTGCTTAACAAACATAGCACTCCCCCCAACAATTAACTTTATTGGAGAGCTCA CCCTTATAGTATCACTATTTGACTGGGCGGACATTACTATTTTTCTAACAGGACTAAGCGCATTCATCAC CTCGATTTACACCCTACACATATTCTCCTCCACCCAGCAAGGAACCTTACCAAGCCACATTATTACAATA AGCCCAACCCAAACGCGAGAACATCTGCTAATAATGCTACACTCTGCACCATCAGTTGCTTTAATCCTTA TTCCTCAACTAATGTATTACCAATAAACCGTAACAACTGACGAAAGCGCACCAACTATGAGAGTGCCTAC AAGAACTGCTAATTCTGTCCCCCGGATTTAATCACCCGGCTCTCATATTATACAATACTGACCCGTAGAT ATAGTTTAAACAAAACGTTAGAATGTGGACCTAAAAACAGGAACTCACTCACTCCTTATCTACCGGCACA CATCTTACTACAAATACTACAAAGCTTTTAATGGATAACAGTATTCCATCGGCTTTAGGAGCCGAGCATC TTGGTGCAACTCCAAGTGAAAGCAACCATAACACAGTCCTCAACCTTAATCATTATACTTTTCCTGCTAC CCCTAGCAATCTTAACGCTCCCAATACTAATCCCAAACTCAAAACTGACCTCGCCACTTAACACCAAAGT GCTGACAGCAAAACTGGCCTTCCTCACTAGCCTAATCCCACTGACCTATCTCATCTATAATGACTTAACC ATTACTACATACGAAACCCAGTGATCAACAATCAGCACAACCACAATTCGCATTAGCTTCACGCTAGACA TTTACTCCACCTTCTTCTTACCCATCCTCCTTTTTGTTGTATGGTCTATCATAGAATTTACAGTACAATA CATGGAGTCAGACATAAAAATTAACGCTTTCTTTAACCAACTCATCACCTTCACCCTAATAATAATAATT CTTGTAACTGCTGAAAACCTCTTCCAATTTTTCATTGGTTGAGAAGGAGTGGGCATCATATCCTTTATGC TGATTAACTGATGATCATTCCGATCAAACTCAAACAAAGCTGCCATGCAAGCCGTAATTTATAACCGCTT AGCAGACATTGGCCTAGTTATCACCCTGGCATGAATAGTCATCAACAACCTATCCCTAAGTATTAAAGGC ATACAAATCACACCAGACATAGCCCTCATCCCCTCACTCGGATTGCTTCTAGCAGCTGCTGGAAAATCTG CTCAATTCGGATTCCACCCATGACTCCCCGCAGCAATAGAAGGTCCAACCCCCGTCTCAGCCCTACTGCA CTCAAGCACTATAGTAGTAGCTGGAGTATTCCTACTCATCCGCACCTCAGACCTCCTATACAGCAGCGAA ACAGCAACCACAGCCTGCTTACTGCTGGGGGCCTTCACATCCATACTGGCCGCCTCCTGTGCACTAACCC AAAATGATCTAAAAAAAATTATTGCCTACTCAACTACTAGCCAGCTAGGCCTAATAATGACCTCCATTGG GTTAAAACAACCCGAACTCGCATTTATACACATCTCAACACACGCATTCTTTAAAGCAATACTATTCCTA TGCGCAGGAGCAATCATCCACAGCCTAGACAACGAACAAGACATCCGAAAGATGGGAGGACTCAAAAAAG CGCTTCCTACTACATCCTCCTGCTTAATTATTGGCTCCCTTGCCCTCTCAGGAATACCATTTATGGCTGG CTTTTACTCAAAAGACGCCATCATTGAATCAATCAACACCTCCAGCGTAAACTCCCTGTCACTAGCCATA ACCCTAGTAGCAACCACCTTCACCACACTTTACAGCCTGCGCATGATCTACTATGTAGCCCTAAGCACCC CACGAATCCTACCACTATCCCCCATCTCCGAAACTCCTCGGACAACCAACCCAATTATACGGCTAGCCAT TGGAAGCATCGCGGGCGGGCTCATAATTTCAGCCACTATTCTACCACCAAATATTCCACAGCTAACCATA CCAACATCAGCCAAGCTGGCCGCACTAAGTATCTTAATCCTAGGGTTACTGGTCGGCTCAATCCTAATTA CAGTAACAGACCAACTTCCCAACTCCACCAAAGGCACCCAAAACCCCCTCATCTCTAAAATCATCCACTC TTACTTCATTCTGCACCATACCCTATCATCCATAGTCTTACAAATCAGCCAAAAACTATCAACCCATCTG ATAGACCAAACACACTATGAAGCCTTAGGCCCTAAAACAATAACCTACCTACAAATACTAATGGCCAAGC TACTAACTAATCTCCATAAAGCCCGAATTAACCCATACTTAAAAATCATTATCCTATCCATCATACTAAT CTCCTTGTTCTACTTAACCTCAATGAGCGCAGAGCCCCTCGATGCCGCCCACGAACTAGAATCATAATGG TAAACAACACCACCAATAAAGCCCAACCACTTAAAATGAGAAAGCCCCAGCCGCTTATATAAAACAGCCC AACCCCTAAAAACTCATTACTCACATCACCACTTCAGGTCTCAACGGCATCAACAAAACACCCTAAAACC TCAGCTCACGCAGAGTCATATATATAATATCCACCAACGCCTAAACCAGCCCCGCAAACACAGGCCAACA CCTTAGACCCCCCTGCTCCCCAGAATTCACAATATTTATCATCAGTGAATCCCACACAAAAAGCAAAAAC CACCAATAAACCGCCCAAATAAATTAGTAGTACTACAAGCGGCATAAAACTTCCACCTCCCACTACTAAT AATGCACTGCCAAATATTGCAGCAAAAAGCAAACTAACCACCCCATAATGGATCGTCACCCCAGACGCCA CTAACACCACACTGACTATCATTAAACAACAAAGAAGAAAAAATGTAATTCCCATTATTCTCACCTGGAC TTAGACCAAGACCTGGGGTACGAAAAACCCCTGTTGTATCTTCAACTATAAAAACTAACATTAAACCAAA TGGCCCACCAACTACGAAAATCCCACCCACTCTTAAAACTAGTAAACCACTCTTTAATTGACTTACCCAC CCCATCCAACATCTCCTACTGATGAAATTTTGGATCACTTCTTGGATTCACCCTATTAATCCAACTAGCA TCGGGCATCCTACTAATAATGCACTTCCTAGCTGATGACTCTCTGGCTTTTATATCTGTCGCTTATACTT CACGAGAAGTTTGATATGGCTGATTAATCCGAAGTCTCCATGCAAACGGAGCCTCCCTATTCTTCCTATG TATTTTCCTACACATTGGGCGCGGAGTATACTATGGATCATATCTCAATGAAAACACATGAAACATCGGA GTACTGCTACTGTTACTACTGATAGCAACTGCCTTCATAGGCTACGTCTTACCATGAGGACAAATATCAT TCTGAGGGGCAACCGTAATCACCAACCTAATATCAGCCATCCCATACGTAGGAGACACAATTGTAACCTG AATTTGAGGAGGGCCATCAGTCAACAGCGCAACCCTAACACGATTCACCACTTTACACTTCCTTCTCCCA TTTGTCCTCATAGCCACAGTCATCACACACCTCATCTTCCTCCACGAACGCGGATCATTCAACCCACTAG GACTAGCCTCCAACGCCGACAAAATTCCATTCCACCCATACTTCTCAGCAAAAGACGCCATAGGAATAGT CATAGCCACCGTCCTATTAATAACCCTTACGTTCTACTTCCCAAACCTATTAGGGGACCCAGAAAACTTT ACCCCTGCCGACCCCATAAAGACGCCAGACCATATTAAACCAGAATGATACTTCTTATTTGCCTACACAA TCCTACGATCTATCCCAAACAAGCTCACAGGAGTACTTGCCATGTTCGCATCCATCCTAGTACTATTACT TCTACCTGCACTACATACATCAAAACGGCAATCAATAAGCCTGCGCCCTCTATCCCAACTCCTATTCTGA ACCCTAATCGCAGACTTCTTTATTCTCACATGAATTGGAGGACAACCAGTGCAGGACCCATACATCTTAA TTGGACAAATAGCCTCCTTCATCTACTTCTCCACCATCCTTATCTTACTACCGCTGGCTGGAATAATTGA AAACCTATTAATCAAACCCCTTCGGTACCGACCCTACGGACCATGAAAACTCCCCATTATACCAACATGA GGCAGTAGAATAACCCCACACACTCTTGTAGCTCAACCCCAAAGCGCTGGCCTTGTAAGACAGAGATGGA ATACACACACCTTCCCAAGAGTGTCTAACAACCGTTCAAGAAGGCAGACATAACTCTACTCTTCCGGCCC CCAAAGCCGACATTCTTATTAAACTACTTCTTGAACTAAATCAGTCATCGTAGCTTAATTCACAAAAGCA TAACACTGAAAATGTTAATATGGACAAAGAGTCCCGAATGACAAACAGACCAACCAAAAACCACGAGCAC TATTACCTTCCCCCAAACAAAAAGATAATATGTACCACCCCCCAGCTATGTATTATAAGGCATTCATTTA TCTGCCCCTAGCACCCATCCATTAGTTCTTATTAGTCAGCATCTCACGTGAAATCACCATCCATTGTATC CATACTAACTATTACTAGTCTCAAGCCCATACCTGGACACGGCTCACATTTATTGCTCTTCTTAGAGACC TCTGGTTATCACTCTCACGTACCCATCTTGCTATTGCCTGGACATTCTTTCCTCTTCTTAGAGGCCTCAA CCCGCACCATATGGCTTCACTCATTCACGTCCGTAATCGCGGCATCCCTTTTCTTCAATGGCTATTGGTT CTTTATTTTTTTGGGGAGATCTCATCCACTACCCGGGGGCTTATATCTAAAATCATTAAATCAAGGTGGT ACATATTCCTTGCAGAACGGACCAGCTCGGCTTTCATGTACATAAATATTTAATGCTCGTTATACATATT ACTCTTTAATTAGGCCCCCCCTCCCCCCAGTTTTAGTTGGCCCCGGGGTCGGCTCTTCTGTAATTTTAGT GATAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAGATAGAAAGAAAAACACAAAGGAAAAACAGGA AAAATTTTTAACTTTTTTTTTTATTTTTTTTAAAAATTATTAACCTAGGCTAAAATAGGAAAAAATTTTA AAAATTTTTTTAAAAATTTTAAAAAATTTTTTTAAAATTATTAACCTAAGCTAAAATAGGAAAAAATTTT AAAAAATTTTAAAAAATTTTAAAAAATTTTTTTAAAATTATTAACCTAAGCTAAAATAGGAAAAAATTTT AAAAAATTTTAAAAATTTTTTTTAAAAATTATTAACCTAGGCTAAAATAGGAAAAAATTTTAAAAAATTT TAAAATTTTTTTTAAAAATTATTAACCTAGGCTAAAATAGGAAAAACCTTTAACACATTAAACTAAGACT GCCACCACAGCCATACAGTTATTATACACAAACAAAACATGAGCGTTAAATCGCCCAAATAACAA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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