Viewing data for Tamias sibiricus
| Scientific name | Tamias sibiricus |
| Common name | Siberian chipmunk |
| Maximum lifespan | 9.60 years (Tamias sibiricus@AnAge) |
| Total mtDNA (size: 16558 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5808 | 10750 | 3791 | 2017 | 5155 | 5595 |
| Base content per 1 kb (bases) | 351 | 649 | 229 | 122 | 311 | 338 |
| Base content (%) | 35.1% | 64.9% | ||||
| Total protein-coding genes (size: 11328 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 3940 | 7388 | 2697 | 1243 | 3659 | 3729 |
| Base content per 1 kb (bases) | 348 | 652 | 238 | 110 | 323 | 329 |
| Base content (%) | 34.8% | 65.2% | ||||
| D-loop (size: 1090 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 388 | 702 | 261 | 127 | 360 | 342 |
| Base content per 1 kb (bases) | 356 | 644 | 239 | 117 | 330 | 314 |
| Base content (%) | 35.6% | 64.4% | ||||
| Total tRNA-coding genes (size: 1508 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 513 | 995 | 300 | 213 | 453 | 542 |
| Base content per 1 kb (bases) | 340 | 660 | 199 | 141 | 300 | 359 |
| Base content (%) | 34.0% | 66.0% | ||||
| Total rRNA-coding genes (size: 2560 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 942 | 1618 | 518 | 424 | 660 | 958 |
| Base content per 1 kb (bases) | 368 | 632 | 202 | 166 | 258 | 374 |
| Base content (%) | 36.8% | 63.2% | ||||
| 12S rRNA gene (size: 965 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 380 | 585 | 211 | 169 | 240 | 345 |
| Base content per 1 kb (bases) | 394 | 606 | 219 | 175 | 249 | 358 |
| Base content (%) | 39.4% | 60.6% | ||||
| 16S rRNA gene (size: 1595 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 562 | 1033 | 307 | 255 | 420 | 613 |
| Base content per 1 kb (bases) | 352 | 648 | 192 | 160 | 263 | 384 |
| Base content (%) | 35.2% | 64.8% | ||||
| ATP6 (size: 680 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 234 | 446 | 167 | 67 | 222 | 224 |
| Base content per 1 kb (bases) | 344 | 656 | 246 | 99 | 326 | 329 |
| Base content (%) | 34.4% | 65.6% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 63 | 141 | 50 | 13 | 61 | 80 |
| Base content per 1 kb (bases) | 309 | 691 | 245 | 64 | 299 | 392 |
| Base content (%) | 30.9% | 69.1% | ||||
| COX1 (size: 1542 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 568 | 974 | 324 | 244 | 513 | 461 |
| Base content per 1 kb (bases) | 368 | 632 | 210 | 158 | 333 | 299 |
| Base content (%) | 36.8% | 63.2% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 241 | 443 | 152 | 89 | 221 | 222 |
| Base content per 1 kb (bases) | 352 | 648 | 222 | 130 | 323 | 325 |
| Base content (%) | 35.2% | 64.8% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 293 | 491 | 179 | 114 | 258 | 233 |
| Base content per 1 kb (bases) | 374 | 626 | 228 | 145 | 329 | 297 |
| Base content (%) | 37.4% | 62.6% | ||||
| CYTB (size: 1139 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 430 | 709 | 297 | 133 | 365 | 344 |
| Base content per 1 kb (bases) | 378 | 622 | 261 | 117 | 320 | 302 |
| Base content (%) | 37.8% | 62.2% | ||||
| ND1 (size: 956 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 359 | 597 | 257 | 102 | 287 | 310 |
| Base content per 1 kb (bases) | 376 | 624 | 269 | 107 | 300 | 324 |
| Base content (%) | 37.6% | 62.4% | ||||
| ND2 (size: 1042 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 338 | 704 | 256 | 82 | 335 | 369 |
| Base content per 1 kb (bases) | 324 | 676 | 246 | 79 | 321 | 354 |
| Base content (%) | 32.4% | 67.6% | ||||
| ND3 (size: 346 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 113 | 233 | 76 | 37 | 122 | 111 |
| Base content per 1 kb (bases) | 327 | 673 | 220 | 107 | 353 | 321 |
| Base content (%) | 32.7% | 67.3% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 462 | 916 | 333 | 129 | 460 | 456 |
| Base content per 1 kb (bases) | 335 | 665 | 242 | 94 | 334 | 331 |
| Base content (%) | 33.5% | 66.5% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 89 | 208 | 58 | 31 | 117 | 91 |
| Base content per 1 kb (bases) | 300 | 700 | 195 | 104 | 394 | 306 |
| Base content (%) | 30.0% | 70.0% | ||||
| ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 593 | 1225 | 422 | 171 | 600 | 625 |
| Base content per 1 kb (bases) | 326 | 674 | 232 | 94 | 330 | 344 |
| Base content (%) | 32.6% | 67.4% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 181 | 344 | 144 | 37 | 118 | 226 |
| Base content per 1 kb (bases) | 345 | 655 | 274 | 70 | 225 | 430 |
| Base content (%) | 34.5% | 65.5% | ||||
| ATP6 (size: 680 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.89%) 
Alanine (Ala, A)
n = 15 (6.67%) 
Serine (Ser, S)
n = 14 (6.22%) 
Threonine (Thr, T)
n = 21 (9.33%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 9 (4.0%) 
Leucine (Leu, L)
n = 39 (17.33%) 
Isoleucine (Ile, I)
n = 29 (12.89%) 
Methionine (Met, M)
n = 16 (7.11%) 
Proline (Pro, P)
n = 14 (6.22%) 
Phenylalanine (Phe, F)
n = 13 (5.78%) 
Tyrosine (Tyr, Y)
n = 2 (0.89%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 12 (5.33%) 
Glutamine (Gln, Q)
n = 9 (4.0%) 
Histidine (His, H)
n = 6 (2.67%) 
Lysine (Lys, K)
n = 4 (1.78%) 
Arginine (Arg, R)
n = 5 (2.22%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 8 | 14 | 13 | 1 | 14 | 0 | 11 | 9 | 0 | 3 | 0 | 6 | 0 | 9 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 2 | 6 | 7 | 0 | 0 | 2 | 9 | 0 | 9 | 1 | 4 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 8 | 1 | 3 | 1 | 6 | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 5 | 7 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 3 | 0 | 1 | 0 | 3 | 1 | 1 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 39 | 62 | 86 | 39 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 60 | 37 | 106 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 45 | 100 | 76 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFVTILSMIIALFIMFQLKISNHLYPTNPLFKDTKLIEHKSPWETKWTKIYLPLSLPLQ* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.49%)
Serine (Ser, S)
n = 5 (7.46%)
Threonine (Thr, T)
n = 7 (10.45%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.49%)
Leucine (Leu, L)
n = 11 (16.42%)
Isoleucine (Ile, I)
n = 7 (10.45%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 6 (8.96%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 2 (2.99%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 2 (2.99%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 3 (4.48%)
Histidine (His, H)
n = 2 (2.99%)
Lysine (Lys, K)
n = 6 (8.96%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 3 | 1 | 2 | 0 | 3 | 0 | 5 | 3 | 0 | 0 | 0 | 1 | 0 | 1 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 2 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 4 | 1 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 2 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 0 | 1 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 6 | 16 | 25 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 19 | 20 | 26 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 15 | 35 | 14 | ||||||||||||
| COX1 (size: 1542 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.16%)
Alanine (Ala, A)
n = 42 (8.19%)
Serine (Ser, S)
n = 29 (5.65%)
Threonine (Thr, T)
n = 37 (7.21%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.41%)
Leucine (Leu, L)
n = 59 (11.5%)
Isoleucine (Ile, I)
n = 39 (7.6%)
Methionine (Met, M)
n = 32 (6.24%)
Proline (Pro, P)
n = 28 (5.46%)
Phenylalanine (Phe, F)
n = 42 (8.19%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 16 (3.12%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 16 (3.12%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.51%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 11 | 29 | 14 | 4 | 22 | 0 | 19 | 5 | 1 | 13 | 4 | 21 | 0 | 20 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 12 | 7 | 23 | 0 | 9 | 6 | 25 | 7 | 12 | 2 | 14 | 0 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 20 | 0 | 9 | 4 | 13 | 0 | 0 | 3 | 16 | 3 | 1 | 0 | 11 | 5 | 11 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 9 | 1 | 8 | 8 | 9 | 0 | 1 | 1 | 5 | 1 | 0 | 0 | 0 | 1 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 153 | 100 | 136 | 125 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 133 | 95 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 91 | 230 | 178 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 8 (3.52%)
Serine (Ser, S)
n = 21 (9.25%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 35 (15.42%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 13 (5.73%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 12 (5.29%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 7 (3.08%)
Glutamine (Gln, Q)
n = 5 (2.2%)
Histidine (His, H)
n = 8 (3.52%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 3 | 11 | 9 | 3 | 10 | 1 | 10 | 4 | 1 | 6 | 4 | 3 | 0 | 6 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 0 | 3 | 3 | 2 | 0 | 2 | 0 | 6 | 0 | 4 | 3 | 7 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 8 | 0 | 5 | 3 | 9 | 0 | 3 | 1 | 9 | 1 | 0 | 2 | 2 | 5 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 13 | 2 | 6 | 6 | 4 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 56 | 56 | 62 | 54 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 56 | 62 | 85 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 40 | 98 | 82 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 16 (6.15%)
Serine (Ser, S)
n = 22 (8.46%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 11 (4.23%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 3 | 9 | 5 | 3 | 13 | 1 | 13 | 7 | 0 | 6 | 1 | 7 | 2 | 14 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 4 | 5 | 6 | 1 | 4 | 7 | 8 | 1 | 1 | 4 | 5 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 13 | 0 | 6 | 2 | 9 | 0 | 2 | 3 | 10 | 0 | 0 | 0 | 5 | 3 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 8 | 0 | 3 | 0 | 3 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 63 | 60 | 62 | 76 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 64 | 55 | 98 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 55 | 116 | 83 | ||||||||||||
| CYTB (size: 1139 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.35%)
Alanine (Ala, A)
n = 19 (5.03%)
Serine (Ser, S)
n = 25 (6.61%)
Threonine (Thr, T)
n = 26 (6.88%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 14 (3.7%)
Leucine (Leu, L)
n = 59 (15.61%)
Isoleucine (Ile, I)
n = 46 (12.17%)
Methionine (Met, M)
n = 15 (3.97%)
Proline (Pro, P)
n = 22 (5.82%)
Phenylalanine (Phe, F)
n = 29 (7.67%)
Tyrosine (Tyr, Y)
n = 15 (3.97%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.91%)
Glutamic acid (Glu, E)
n = 6 (1.59%)
Asparagine (Asn, N)
n = 15 (3.97%)
Glutamine (Gln, Q)
n = 6 (1.59%)
Histidine (His, H)
n = 13 (3.44%)
Lysine (Lys, K)
n = 10 (2.65%)
Arginine (Arg, R)
n = 8 (2.12%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 30 | 16 | 13 | 9 | 11 | 23 | 2 | 14 | 5 | 1 | 7 | 1 | 5 | 1 | 13 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 3 | 6 | 5 | 8 | 0 | 2 | 3 | 19 | 0 | 3 | 8 | 11 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 13 | 0 | 6 | 6 | 10 | 0 | 1 | 2 | 6 | 9 | 1 | 0 | 4 | 11 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 5 | 1 | 5 | 6 | 10 | 0 | 1 | 2 | 5 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 94 | 115 | 96 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 51 | 89 | 76 | 163 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 114 | 152 | 105 | ||||||||||||
| ND1 (size: 956 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 28 (8.83%)
Serine (Ser, S)
n = 22 (6.94%)
Threonine (Thr, T)
n = 25 (7.89%)
Cysteine (Cys, C)
n = 2 (0.63%)
Valine (Val, V)
n = 10 (3.15%)
Leucine (Leu, L)
n = 60 (18.93%)
Isoleucine (Ile, I)
n = 25 (7.89%)
Methionine (Met, M)
n = 22 (6.94%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 23 (7.26%)
Tyrosine (Tyr, Y)
n = 9 (2.84%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 4 (1.26%)
Glutamic acid (Glu, E)
n = 10 (3.15%)
Asparagine (Asn, N)
n = 11 (3.47%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 2 (0.63%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 7 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 16 | 21 | 9 | 8 | 25 | 1 | 17 | 7 | 0 | 1 | 3 | 5 | 1 | 16 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 4 | 10 | 13 | 1 | 2 | 3 | 6 | 1 | 6 | 6 | 10 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 16 | 0 | 3 | 5 | 11 | 0 | 0 | 3 | 6 | 3 | 0 | 0 | 5 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 10 | 0 | 1 | 3 | 8 | 0 | 0 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 81 | 94 | 79 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 94 | 51 | 140 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 82 | 164 | 67 | ||||||||||||
| ND2 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.34%)
Alanine (Ala, A)
n = 14 (4.05%)
Serine (Ser, S)
n = 33 (9.54%)
Threonine (Thr, T)
n = 32 (9.25%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 55 (15.9%)
Isoleucine (Ile, I)
n = 42 (12.14%)
Methionine (Met, M)
n = 36 (10.4%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 17 (4.91%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 23 (6.65%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 4 (1.16%)
Lysine (Lys, K)
n = 11 (3.18%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 33 | 9 | 33 | 8 | 9 | 19 | 0 | 19 | 9 | 0 | 2 | 3 | 3 | 0 | 12 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 1 | 6 | 7 | 0 | 2 | 2 | 8 | 3 | 6 | 5 | 9 | 1 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 10 | 0 | 6 | 7 | 18 | 0 | 1 | 1 | 2 | 5 | 0 | 0 | 8 | 15 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 5 | 0 | 0 | 1 | 10 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 43 | 73 | 146 | 85 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 98 | 60 | 158 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 85 | 163 | 91 | ||||||||||||
| ND3 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.34%)
Alanine (Ala, A)
n = 14 (4.05%)
Serine (Ser, S)
n = 33 (9.54%)
Threonine (Thr, T)
n = 32 (9.25%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 55 (15.9%)
Isoleucine (Ile, I)
n = 42 (12.14%)
Methionine (Met, M)
n = 36 (10.4%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 17 (4.91%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 23 (6.65%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 4 (1.16%)
Lysine (Lys, K)
n = 11 (3.18%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 33 | 9 | 33 | 8 | 9 | 19 | 0 | 19 | 9 | 0 | 2 | 3 | 3 | 0 | 12 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 1 | 6 | 7 | 0 | 2 | 2 | 8 | 3 | 6 | 5 | 9 | 1 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 10 | 0 | 6 | 7 | 18 | 0 | 1 | 1 | 2 | 5 | 0 | 0 | 8 | 15 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 5 | 0 | 0 | 1 | 10 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 43 | 73 | 146 | 85 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 98 | 60 | 158 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 85 | 163 | 91 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 29 (6.33%)
Serine (Ser, S)
n = 43 (9.39%)
Threonine (Thr, T)
n = 38 (8.3%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 11 (2.4%)
Leucine (Leu, L)
n = 85 (18.56%)
Isoleucine (Ile, I)
n = 51 (11.14%)
Methionine (Met, M)
n = 34 (7.42%)
Proline (Pro, P)
n = 21 (4.59%)
Phenylalanine (Phe, F)
n = 22 (4.8%)
Tyrosine (Tyr, Y)
n = 18 (3.93%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 16 (3.49%)
Glutamine (Gln, Q)
n = 12 (2.62%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 10 (2.18%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 38 | 13 | 32 | 12 | 9 | 34 | 3 | 26 | 11 | 1 | 5 | 1 | 5 | 0 | 16 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 2 | 8 | 10 | 11 | 0 | 1 | 3 | 14 | 0 | 5 | 7 | 9 | 0 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 18 | 0 | 12 | 9 | 13 | 1 | 2 | 6 | 12 | 6 | 0 | 1 | 9 | 7 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 8 | 0 | 2 | 2 | 13 | 0 | 0 | 2 | 8 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 112 | 160 | 117 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 51 | 123 | 82 | 203 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 98 | 214 | 139 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 3 (3.06%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 20 (20.41%)
Isoleucine (Ile, I)
n = 9 (9.18%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 8 (8.16%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 2 | 7 | 4 | 1 | 7 | 0 | 8 | 2 | 0 | 0 | 0 | 6 | 0 | 5 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 3 | 0 | 2 | 6 | 0 | 1 | 1 | 2 | 0 | 2 | 0 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 0 | 4 | 0 | 5 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 3 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 21 | 19 | 25 | 34 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 9 | 22 | 17 | 51 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 1 | 17 | 49 | 32 | ||||||||||||
| ND5 (size: 1818 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (4.46%)
Alanine (Ala, A)
n = 36 (5.95%)
Serine (Ser, S)
n = 48 (7.93%)
Threonine (Thr, T)
n = 54 (8.93%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 15 (2.48%)
Leucine (Leu, L)
n = 92 (15.21%)
Isoleucine (Ile, I)
n = 67 (11.07%)
Methionine (Met, M)
n = 38 (6.28%)
Proline (Pro, P)
n = 26 (4.3%)
Phenylalanine (Phe, F)
n = 49 (8.1%)
Tyrosine (Tyr, Y)
n = 19 (3.14%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 10 (1.65%)
Glutamic acid (Glu, E)
n = 12 (1.98%)
Asparagine (Asn, N)
n = 35 (5.79%)
Glutamine (Gln, Q)
n = 18 (2.98%)
Histidine (His, H)
n = 12 (1.98%)
Lysine (Lys, K)
n = 22 (3.64%)
Arginine (Arg, R)
n = 8 (1.32%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 49 | 18 | 36 | 15 | 6 | 43 | 1 | 26 | 17 | 1 | 4 | 1 | 10 | 0 | 31 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 3 | 5 | 15 | 15 | 1 | 7 | 3 | 17 | 0 | 8 | 6 | 12 | 0 | 16 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 25 | 1 | 11 | 5 | 23 | 2 | 2 | 5 | 7 | 12 | 0 | 1 | 19 | 16 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 10 | 2 | 3 | 7 | 21 | 1 | 1 | 2 | 5 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 100 | 129 | 223 | 154 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 59 | 157 | 129 | 261 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 136 | 273 | 185 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (14.94%)
Alanine (Ala, A)
n = 6 (3.45%)
Serine (Ser, S)
n = 14 (8.05%)
Threonine (Thr, T)
n = 6 (3.45%)
Cysteine (Cys, C)
n = 2 (1.15%)
Valine (Val, V)
n = 19 (10.92%)
Leucine (Leu, L)
n = 22 (12.64%)
Isoleucine (Ile, I)
n = 14 (8.05%)
Methionine (Met, M)
n = 14 (8.05%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 13 (7.47%)
Tyrosine (Tyr, Y)
n = 8 (4.6%)
Tryptophan (Trp, W)
n = 6 (3.45%)
Aspartic acid (Asp, D)
n = 6 (3.45%)
Glutamic acid (Glu, E)
n = 8 (4.6%)
Asparagine (Asn, N)
n = 3 (1.72%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.57%)
Lysine (Lys, K)
n = 1 (0.57%)
Arginine (Arg, R)
n = 2 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 1 | 9 | 1 | 0 | 0 | 0 | 14 | 0 | 0 | 9 | 0 | 4 | 6 | 12 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 2 | 0 | 4 | 0 | 2 | 0 | 12 | 1 | 6 | 7 | 3 | 0 | 0 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 0 | 4 | 0 | 3 | 1 | 5 | 1 | 5 | 3 | 3 | 7 | 3 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 6 | 6 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 65 | 7 | 45 | 58 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 23 | 27 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 36 | 7 | 46 | 86 | ||||||||||||
| Total protein-coding genes (size: 11395 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 216 (5.69%)
Alanine (Ala, A)
n = 230 (6.06%)
Serine (Ser, S)
n = 291 (7.67%)
Threonine (Thr, T)
n = 293 (7.72%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 163 (4.3%)
Leucine (Leu, L)
n = 599 (15.79%)
Isoleucine (Ile, I)
n = 373 (9.83%)
Methionine (Met, M)
n = 247 (6.51%)
Proline (Pro, P)
n = 196 (5.17%)
Phenylalanine (Phe, F)
n = 257 (6.77%)
Tyrosine (Tyr, Y)
n = 126 (3.32%)
Tryptophan (Trp, W)
n = 105 (2.77%)
Aspartic acid (Asp, D)
n = 73 (1.92%)
Glutamic acid (Glu, E)
n = 95 (2.5%)
Asparagine (Asn, N)
n = 157 (4.14%)
Glutamine (Gln, Q)
n = 87 (2.29%)
Histidine (His, H)
n = 95 (2.5%)
Lysine (Lys, K)
n = 95 (2.5%)
Arginine (Arg, R)
n = 64 (1.69%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 264 | 109 | 219 | 107 | 55 | 221 | 9 | 195 | 82 | 5 | 57 | 18 | 77 | 11 | 162 | 95 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 28 | 10 | 17 | 49 | 74 | 104 | 3 | 42 | 33 | 122 | 19 | 61 | 47 | 87 | 1 | 82 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 68 | 140 | 3 | 71 | 43 | 127 | 4 | 17 | 29 | 78 | 48 | 5 | 12 | 75 | 82 | 47 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 48 | 82 | 13 | 39 | 34 | 91 | 4 | 8 | 10 | 44 | 2 | 1 | 0 | 4 | 1 | 100 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 777 | 834 | 1212 | 972 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 459 | 964 | 733 | 1639 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 120 | 810 | 1696 | 1169 | ||||||||||||
>NC_025277.1 Tamias sibiricus mitochondrion, complete genome TTTAACGTAGCTTAAATACTAAAGCAAAGCACTGAAAATGCTTAGACGGATTATATTAATCCCGTAAACA TAAAGGTTTGGTCCTGGCCTTTTCATTAACTTATAGTTGACTTATACATGCAAGCATCCCCATCCCGGTG AGAATGCCCTCTATATCTTACTAGATCAAAAGGTGCAGGCATCAAGTTCACTTATTTACCATGTAGCTCA TAACGCCTTGCTCCACCACACCCCCACGGGACACAGCAGTAATTAAAATTAAGCAATGAACGAAAGTTCG ACTAAATTAGACTATTCTAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAGTT AATGAAGCACGGCGTAAAGCGTGATTAAGAGATATCACAAATAAGATTAAGCTAATACTAAGCTGTAGAA AGCCCTAGTATTAATAAAAATAGAATACGAAAGTAATCTTAAAAATTCTGAACTCACGATAGCTAAGACA CAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACATAAATACTCAATAAACAAGAGTATTCGCC AGAGTACTACTAGCAACAGCCTAAAACTCAAAGGACTTGGCGGTGCTTTACACCCCTCTAGAGGAGCCTG TTCTATAATCGATAAACCCCGCTTAACCTTACCACCCCTTGCAACATCAGCCTATATACCGCCATCTTCA GCAAACCCTATCAAGGTAGTATAGTAAGCACAATAATTCAACACTAATACGTTAGGTCAAGGTGTAGCCT ATGAGGTGGGAAGAAATGGGCTACATTTTCTACTCTACTAGAACACTCACGATAACTTTCATGAAACACT GAAAGTCAAAGGCGGATTTAGTAGTAAGTTAGGAGTAGAGAGCCTAACTGAATAGGGCAATAAGGCACGC ACACACCGCCCGTCACCCTCTTCAAATATAAAATAAAATTTAATTCCATAATTATATTAAACACAAGTAT AAGAAGAGATAAGTCGTAACAAGGTAAACATACTGGAAAGTGTGTTTGGAATAATCAAAATGTAGCTTAA CACATAAAGCATCTGGCCTACACCCAGAAGATTTCCTTATAAAGAACATTTTGAAACCAATTCTAGCTCA ACATCCTACAAAATTTAACTACAAACAATCCATTAAACAAAACATTTACCTCTGAAAAAGTATAGGAGAT AGAAATTCAAAACATGAAGCTATAGAGATAGTACCGTAAGGGAAAGATGAAAGAAAAAAAATATAGTGAA ACAAAGCAAAGACTAAAACTTTTACCTTTTGCATAATGATTTAACTAGAATACTTTTGACAAAAAGAATT TAAGCCAAAAACCCCGAAACCAGACGAGCTACTTACTAGCAGCCAATTTAGGGCCAATCCGTCTATGTAG CAAAATAGTGGAAAGACTAATAAGTAGAGGTGAAAAGCCTATCGAGCCTGGTGATAGCTGGTTGTCCAGA CTAGAATATTAGTTCAACCTTAAATTTATCTAAAGCAATATCCCAAAAGCCAAATATAAATTTTAAGCGC TATTCTAAAGAGGGACAGCTCTTTAGAACAAGGAAAAAACCTTAATTAGAGAGTAAATATTTATATTTAT CATAGTTGGCCTAAAAGCAGCCATCAATTAAAAAAGCGTTAAAGCTTAACCAATATACCAAAACTAAATA TCTTTATTTACCTTGACCTCCTAATTTATAAACTGGACTAATCTATTAATCAATAGAAGAAATAATGTTA AAATAAGTAACAAGAAAATATTTCTCCCTGCATAAGCTTATATCAGATCAAATAATTTACTGATAGTTAA CAGCCCAATAAAAACAAACATACTATTAAAGCATTATTAAACACACTGTTAACCCAACCCTGGCATGCAC CTATAATAAACCTTAAGGGAAAGATTAAAAAGAGTAAAAGGAACTCGGCAAACAATAACCCCGCCTGTTT ACCAAAAACATCACCTCTAGCATAAAAAGTATTAGAGGCACTGCCTGCCCAGTGACATAAGTTAAACGGC CGCGGTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAAATAGGGACTTGTATGAATGGCTT GACGAGGGTTTAACTGTCTCTTACTCCCAATCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATATAA TAATAAGACGAGAAGACCCTATGGAGCTTAAATATTCTAGTCTAACATTCACTCCATTTACACCCACGGG CAATAAAACCTATGTAAACAGACTACAAATTTTGGTTGGGGTGACCTCGGAGTACAAATTAACCTCCGAA TGATATTAATCTAGACTACGACCCGTCTAAATTTTTATTCATAAATTGACCCAAAAATATTTGATCAACG GAACAAGTTACCCTAGGGATAACAGCGCAATCCTACTCAAGAGTTCATATCGACAGTTAGGGTTTACGAC CTCGATGTTGGATCAGGACATCCAAATGGTGTAACCGCTATTAATGGTTCGTTTGTTCAACGATTAAAGT CCTACGTGATCTGAGTTCAGACCGGAGAAATCCAGGTCGGTTTCTATCTATTAATAAATTTCTCCCAGTA CGAAAGGACAAGAGAAATAAGGCCAATTTTTCATTATATGCCTTAGACAAATAGATGATATCATCTAAAT CTAGTAAACCATTATTAACCCTGCCCTAGAACAGGGTTTGTTAAGATGGCAGAGCCTGGAAATTGCGTAA GACTTAAAACTTTATTATCAGAGGTTCAACTCCTCTTCTTAACACTTATGTTCTTAATAAACTTACTCCT ACTTATTATCCCAATCCTAGTGGCAATAGCATTCTTAACCCTTGTAGAACGAAAAATATTAGGATATATA CAACTCCGAAAAGGCCCAAACATTGTAGGACCATATGGCCTCCTACAACCATTTGCAGATGCCATAAAAT TATTTATAAAAGAACCCCTAAAACCCCTAACATCTTCTATTTCCCTATTTATTATCGCCCCATCACTAGC TTTAACACTGGCATTTACAATATGAATTCCTATCCCTATACCCCAACCCCTAATCAACATAAATATAGGT ATACTTTTTATCCTTGCCACATCAAGCTTAGCTGTCTATACAATCTTATGATCAGGATGAGCCTCAAATT CAAAATACGCCCTATTTGGAGCATTACGAGCCGTAGCACAAACAATCTCCTATGAAGTCACCTTAGCAAT CATCCTCCTATCAGTACTTCTATTAAGCGGGTCATTTACTCTATCTTCCCTTATCACAACTCAACAATTT ACATGACTCCTATTACCTACATGACCCCTAGCCATAATATGATTTATCTCAACATTAGCAGAAACTAACC GAGCCCCTTTTGACTTAGCAGAAGGAGAATCAGAACTTGTATCCGGCTTTAACGTTGAATATGCAGCAGG TCCATTTGCCCTATTCTTTATAGCTGAATACACAAATATCATTATAATAAATGCTCTCACAACCACAATC TTCATAGGAGCATTACTCAACCCACTTGACCCTGAAATATTTACATTTAGCTTCACCCTAAAAACCCTTC TATTAACATCAATTTTCCTATGAATTCGAGCATCATACCCACGATTCCGCTATGACCAACTAATACATCT CCTATGAAAAAATTTTTTACCACTAACACTAGCCCTATGCATATGACACATCTCCCTACCCGTCATCATA GCGTGTATTCCACCTCTAACCTAAAGAAATATGTCTGACAAAAGAGTTACTTTGATAGAGTAAATAATAG AGGTTTAAATCCTCTTATTTCTAAAACAATAGGACTTGAACCTAATCTAAAGAATTCAAAATTCTTCGTG CTACCCTTACACCATGTCTTATTAGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTT GGTTTTTATCCTTCCCGTACTAATTAATCCCTTAACCTCCTCCACTATCTACCTAACCCTCATTTCAGGA ACATTAATTACATTATTTAGTTCTCATTGACTAATAATCTGAGTAGGTTTAGAAATAAGCATACTAGCTA TTATCCCAATTCTCATCAACAAAGCCAACCCACGATCAACAGAAGCAGCATCCAAATATTTTCTAGTTCA AGCAACAGCATCAATGATTCTCATAATAGGGTCAATCATTAACTTCATGAATATAGGCCAATGAACCCTT ATAAATCCATTTAACCAAGTCTCATCAATTATATTTACCATTGCACTCTCAATAAAAATAGGACTAGCCC CATTTCATATATGAGTACCTGAAGTTACCCAAGGAATTCCACTTATATCAGGACTAATTTTATTAACATG ACAAAAAATTGCCCCAATCTCTATTATACTTCAAATTTCACCGTCCATTAACCCCACCCTCATTATAATA ATAGCCCTACTATCCATCATTCTAGGGGGCTGAGGGGGTCTCAACCAAACTCAACTACGAAAAATTATAG CATATTCATCAATTGCCCACATAGGATGAATAATAATAATTATTACATTTAACCCTACCTTAACCATATT TAACTTAATTATTTACATTTTACTCACATTCAACATATTCATTTTACTTTACCATGACAAAAACACTACC ACCCTATCACTATCTAATTTATGAAATAAATCTCCTATTTTAACCTCCATAACCCTTATCGTCCTAATAT CTCTAGGAGGACTTCCTCCCCTAACTGGATTTACCCCTAAATGAATAATTATTAAAGAACTTGTATCAAA CAACAATATTATCTTATCAACATTAATAGCAATAATTGCCTTACTAAACTTATTTTTCTACATACGACTT GTCTACTCCACATCACTAACTATATTTCCATCATCAAATAATATGAAGATAAAATGACAATTTGAAAACT CAAACCCAACACCCTTTCTACCAACTTTCATTACCTTATCTACCATAACTTTACCTCTAATACCCCTCCT CTTATGCATTATTTAGAAATTTAGGTTAAACAGACCAAGAGCCTTCAAAGCCCTAAGTAAGTGAATACAC TTAATTTCTGAAATAAGGACTGCAAGACTCTATCCTACATCAACCGAATGCAAATCAGCCACTTTAATTA AGCTAAGCCCTTAATTCCTAGACTGATGGGACTTAAACCCATGAACCTTTAGTTAACAGCTAAATGCCTA AATCAACTGGCTTCAATCTACTTCTCCCGCCGTATAAAAAAAAGGCGGGAGAAGCCCCGGCAGAGTTGAA GCTGCTTCTTTGAATTTGCAATTCAATATGACAATTCACCTCAGGACTTGGTAAAAAGAGGAATTCAACC TCTGTCTTTAGATTTACAGTCTAATGCTTGCTCAGCCATTTTACCACCTACCTATGTTCATCAACCGTTG ATTATTCTCAACAAATCACAAAGACATTGGAACTCTATATCTCCTATTCGGCGCTTGAGCAGGAATAGTT GGAACAGCACTTAGCCTACTAATTCGAGCAGAACTAGGCCAACCTGGAGCCCTACTAGGAGACGATCAGA TCTATAATGTCATTGTAACTGCCCATGCATTTGTAATAATTTTCTTCATAGTTATACCAATTATAATTGG TGGATTCGGAAACTGATTAGTTCCATTAATAATTGGTGCCCCTGATATAGCATTCCCACGAATAAATAAT ATGAGCTTTTGGCTCCTTCCACCATCATTTCTACTTCTTTTAGCTTCATCAATAGTTGAAGCCGGAGCAG GAACAGGTTGAACAGTATACCCTCCTTTAGCTGGAAACCTAGCACATGCAGGAGCATCAGTTGACTTAAC CATTTTCTCCCTTCATCTAGCTGGGGTATCATCAATCCTAGGAGCAATTAATTTTATTACAACTATTATT AACATAAAACCTCCTGCTATATCCCAATATCAAACTCCATTATTTGTCTGATCAGTATTAATCACAGCAG TATTACTTCTTTTATCCCTACCTGTTCTTGCTGCAGGAATCACAATACTCTTAACAGACCGCAATTTAAA TACAACATTCTTTGACCCTGCAGGGGGTGGGGACCCTATTCTTTATCAACATCTATTCTGATTCTTTGGG CATCCAGAAGTTTATATCCTTATTCTTCCTGGATTTGGGATTATTTCTCACATTGTAACTTATTATTCAG GTAAAAAAGAACCCTTCGGTTATATAGGAATAGTATGAGCCATAATATCAATTGGTTTCCTTGGATTTAT CGTATGAGCACATCACATATTCACAGTAGGTATAGACGTTGATACTCGAGCATATTTTACATCTGCAACT ATAATTATTGCTATTCCCACTGGGGTTAAAGTTTTCAGCTGATTAGCAACTCTACACGGAGGAAACATCA AATGATCTCCAGCAATACTATGAGCCCTTGGCTTCATCTTTCTATTCACCGTAGGAGGCCTAACAGGAAT TGTTTTAGCTAATTCCTCTCTAGATATCGTCTTACATGACACATATTATGTCGTAGCACACTTCCATTAT GTTCTATCTATAGGAGCTGTATTTGCCATTATAGGCGGATTTGTACACTGATTCCCTTTATTTACTGGCT ATACACTCGATGATATATGAGCTAAAATTCATTTTACAGTTATGTTTGTAGGGGTAAATATAACCTTTTT CCCACAACATTTTTTAGGACTATCAGGAATACCACGACGGTACTCAGATTATCCAGATGCATACACAGCA TGAAATACTGTATCTTCTATAGGTTCTTTCATTTCTCTAACAGCTGTAATAATTATAATTTTCATAATCT GAGAAGCATTTGCATCAAAACGAGAAGTATTAATTGTAGAATTAACAACTACTAATCTAGAGTGACTTCA CGGATGCCCTCCACCATATCATACATTTGAAGAACCAACTTATGTAAAAGCTTAGGTCAAGAAAGGGAAG AATCGAACTTCCTTAAACTAGTTTCAAGCCAGCCCCATAACCACTATGACTTTCTTCATGAGATATTAGT AAAAACATTACATAACTTTGTCAAAGTTAATTTATAGGTTTAAATCCTTTATATCTCTTATGGCATATCC ATTTGAATTAGGATTTCAAGATGCTACATCACCCATTATAGAAGAACTTCTACATTTTCACGATCATACT TTAATAATTGTATTCCTAATTAGCTCTTTAGTCCTTTATATTATTTCCCTTATATTAACTACTAAACTCA CCCATACAAGTACTATAGATGCCCAAGAAGTCGAAACAATTTGAACCATTCTTCCTGCCATTATTTTAAT TTTAATTGCCCTGCCTTCATTACGAATTTTATATATAATAGATGAAATTAACGACCCATCACTTACAGTT AAAACTATAGGTCACCAATGATACTGAAGTTATGAATATACAGACTATGAGGACTTAAATTTTGACTCTT ATATAGTCCCAACTTCAGACCTAAACCCCGGAGAACTACGATTGCTAGAAGTTGATAACCGAGTAGTTCT CCCTATAGAACTACCTGTACGTATATTGATTTCATCAGAAGATGTTCTCCACTCTTGAGCAGTTCCATCC CTTGGACTAAAAACAGACGCTATCCCAGGTCGACTAAACCAAGCTACACTTACCTCAACACGACCAGGAC TATATTATGGACAGTGTTCCGAAATCTGTGGATCTAATCATAGTTTTATGCCCATCGTCCTTGAACTAGT TCCATTAAAACACTTTGAGAACTGATCTTCATCAATACTTTAAATTCATTATGAAGCTATAATAGCGTTA ACCTTTTAAGTTAAAGACTAGGATATTAAACATCCTCATAATGAGATGCCACAACTAGATACATCAACAT GATTCGTAACAATCTTATCAATGATTATTGCCTTATTTATTATATTCCAACTTAAAATCTCAAACCATTT ATACCCCACCAACCCACTATTCAAAGACACAAAATTAATTGAACATAAATCCCCTTGAGAAACTAAATGA ACGAAAATCTATTTGCCTCTTTCATTACCCCTACAATAATAGGACTACCTATTGTTGTTCTTATTATTAT ATTCCCTAATATCTTATTTCCTAGCTCCAACCGACTAATCAATAATCGGTTAATCTCATTTCAACAATGA CTAATTCAACTTGTACTAAAACAAATAATGACAATACATAACCAAAAAGGACGAACCTGATCTTTAATAT TAATCTCACTTATTATATTTATTGGCTCAACAAACTTACTAGGACTACTTCCTCACTCATTTACTCCAAC GACCCAACTATCAATAAACCTAGGAATAGCAATTCCTCTATGAGCTGGAGCAGTAATTACTGGCTTCCGT AACAAGACCAAAGCATCTTTAGCCCACTTCTTACCACAAGGAACTCCAATCCCTCTTATTCCCATACTTA TTATTATTGAAACAATTAGCCTTTTTATTCAACCAATAGCCCTTGCCGTACGATTAACCGCCAACATTAC AGCAGGACATCTTCTCATACACCTAATCGGAGGAGCAACTATAGTACTTACTTCAATTAGCCCTCCTACA GCAATAATTACATTTATTATCTTAATTTTACTTACAATCCTTGAATTTGCAGTAGCTCTAATTCAAGCCT ATGTATTTACCCTTCTAGTTAGCCTATACTTACATGATAATACCTAATGACCCACCAAACTCATGCATAT CATATAGTTAATCCCAGCCCCTGACCACTTACAGGAGCATTATCAGCTTTACTCCTTACATCTGGTTTAG TAATATGATTCCACTTTAATTCAAGCACACTACTAACTTTAGGCATACTAACAAATATATTAACCATATA TCAATGATGACGAGATGTAGTTCGTGAAGGGACATTTCAAGGCCACCACACTATAATTGTTCAAAAAGGA CTACGATATGGAATAATTCTATTTATCATTTCAGAAGTATTTTTCTTTGCTGGTTTTTTTTGAGCATTCT ATCACTCTAGTCTAGCCCCTACTCCAGAACTTGGTAGTTGCTGACCCCCAATTGGCATTAACCCCCTAAA TCCACTAGAAGTTCCACTCTTAAACACATCCGTTCTCCTAGCTTCAGGAGTCTCAATCACATGAGCTCAT CATAGCCTAATAGAAGGTAACCGAAAACACATGGTTCAAGCCCTTTCAATTACAATTGCATTAGGACTGT ATTTCACCTTATTACAAGCCTCTGAATATTTAGAAACATCTTTTACTATTTCTGATGGAATTTATGGCTC AACATTTTTTATAGCCACAGGCTTCCACGGACTTCACGTAATTATTGGCTCTACATTTTTACTAGTGTGC TTAGCACGCCAATTAAATTTTCATTTCACATCCAAACATCACTTCGGATTTGAAGCGGCCGCATGATATT GACACTTTGTAGATGTAGTGTGACTATTCCTATATGTATCAATCTATTGATGAGGCTCATACCCCTTTAG TATAATTAGTACAATTGACTTCCAATCAATTAATCCTAGATCAAACCTAGGAAGGAGTAATCAACCTTAT TATCTCTTTATTAATAAACATTTTTATCCCCCTTTTACTTATCTTAGTGGCATTTTGATTACCACAATTA AACATTTACTCAGAAAAAGCAAGTCCATATGAATGCGGATTTGATCCAATAGGATCAGCCCGCCTTCCAT TCTCAATGAAATTTTTTCTTGTAGCAATTACATTTCTATTATTTGATCTAGAAATTGCCTTACTACTACC CTTACCCTGAGCATCTCAAACTACTAATATCAAATTAATACTAACTATAGCCCTAATTTTAATCCTAATT CTAACCCTTGGCTTAGCCTACGAATGAACCCAAAAAGGCTTAGAGTGAGTTGAATTGATAATTAGTTTAA ATAAAACAAGTGATTTCGACTCACTAAATTATGAATTACTCATAATTATCAAATATGCCTGCCATTATCT TTAATACATTTCTAGCATACACAGTATCATTACTAGGAATATTCATTTATCGATCTCATCTTATATCTTC ATTACTATGCTTAGAAGGTATAATATTATCAATATTTATTTTATGTTCTCTCTTAGCCCTTAATTTCCAC TTCTCACTTTCATTTATTATCCCTATTATTTTACTAGTATTTGCAGCATGCGAAGCAGCAGTAGGCCTAG CATTACTAGTAATAGTATCTAACACTTATGGAATAGATTACGTACAAAATCTTAACATTCTACAATGCTA AAAATTATTCTACCAACTATCTTACTAGCACCCCTTACATGATTTTCCAAAAATTCTATAATCTGAATTA ACCCCTCAATCCATAGCCTACTAATTAGCTTAATAGTCCTAATAATACTAAACCAGGCAGACGATGTAGG CTTAACATATTCACAAACTTTCTTTTCTGATACTCTCTCCACACCACTATTAATCTTAACTTCATGACTC CTTCCCTTAATAATTATAGCTAGCCAAAAACATCTATCTAAAGAACCCCTTATACGAAAAAAATTATATA TTCTCATATTGATTTCTCTACAATCATTCTTAATTTTAACTTTCTCGGCTACAGAACTAATCATATTTTA TATCCTGTTTGAAGCCACTTTAATTCCTACCCTAATTATTATTACCCGATGAGGAAGTCAAACTGAACGA CTAAATGCAGGAACATACTTTTTATTTTATACACTAGTTGGATCTCTACCACTTTTAGTAGCCCTCATTT ACATCCAAAAATCTTACGGATCTCTAAATTTTATTGTATCCATATATCAAACTTCTAACCTACCTTTTTT ATGATCAAACAATATCCTGTGACTAGCATGTATCATAGCATTTATAGTTAAAATACCATTATATGGTTTT CACCTATGACTCCCCAAAGCCCATGTTGAAGCCCCAATTGCAGGATCTATAGTTCTTGCAGCCATTCTAC TAAAACTAGGAGGATACGGAATAATCCGCATTTCAACCCTCCTTCACCCTATTACCACTTTCATAGCCTA CCCATTTATTATACTATCCCTATGAGGAATAATTATAACAAGCTCTATCTGCTTACGACAAACAGACTTA AAATCCTTAATTGCTTATTCATCAGTTAGTCACATAGCCCTAGTAATTGTAGCTATTATAATTCAAACAC CCTGAAGCTTCATAGGAGCTACAGCACTTATAATTGCCCATGGCTTAACATCCTCAATACTATTTTGCCT TGCAAACACCAATTATGAACGAATTCACAGCCGAACTATAATTCTAGCACGCGGCCTACAATCAATTCTA CCACTTATAGCTATATGATGAACTCTAGCTACCCTAACTAATCTAGCTCTACCACCATCAATTAATTTAA TTGGAGAAATATTCATTATTTTATCAACCTTTACATGATCTAATTATACAATTATCTTAACCGGAATAAA TATATTAATTACAGCCCTCTATTCACTGTACATATTAATCTCCACACAACGAGGAAAATTTACATATCAC GCATCCAACATTCACCCCTCCTTTACACGAGAAAACATACTCATGCTCCTTCACCTATTTCCTCTTCTTG CCTTATCTATTAAACCTACAATTATTTTAGGACAATTATATTGTAAATATAGTTTAAACAAAACATTAGA TTGTGAATCTAACAATAGAGACTTTCAACCTCTTATTTACCAAGAAAGAATGCAAGAACTGCTAATTCAT GCCCTCCGTATTTACCTATGCGGCTTTCTTACTTTTATAGGATAGTAGTAATCCATTGGCCTTAGGAGCC AAAAAATTGGTGCAACTCCAAATAAAAGTAATTAACATGTTCCCCTCGCTTATCTTCATATCACTTATTA CATTAACTTTCCCAATTATTATAACTCTAACTGACCTAAATAAAAACAATAAATTCCCAAACTACGTAAA AACCTCAATTGTATTAGCCCTACTATTATGCCTAATTCCCACAATAATATTTATCAATCATAATTACGAA TTTATTATCTCTAACTGACACTGAATAACTATTCAAACCTTTAAACTCTCAATAAGCTTTAAACTAGATT ACTTCTCAATTCTATTTATACCAGTAGCATTATTTGTAACATGATCTATTATAGAATTTTCAATATGATA TATACATTCTGACCCCTATATTAATCAATTTTTTAAATACCTTCTTCTTTTTCTCATCACAATAATAATC TTAGTTACATCTAATAATTTATTTCAATTATTTATTGGATGAGAAGGAGTAGGAATCATGTCATTTCTCT TAATTGGTTGATGATACGGTCGAACCGACGCCAACACAGCCGCCCTTCAAGCAATTTTATACAATCGAAT TGGAGATATTGGATTCGTTCTAGCTATAGCCTGATTCCTAACTAACTCAAACTCATGAGAATTTCAACAA TTATTTATACTAAACTCTACTTTCCTACCTTTAATTGGCCTTCTCCTAGCAGCAACCGGTAAATCAGCCC AATTCGGACTTCACCCATGACTTCCTTCAGCAATAGAAGGTCCTACCCCAGTATCAGCCCTACTACATTC CAGTACTATAGTTGTAGCAGGTATTTTCCTACTAATTCGATTTCACCCATTACTAGAACAGAACAAAACT ATTCAAACCCTAATCCTTTGCTTAGGAGCTATCACAACACTATTCACAGCTATCTGTGCCTTAACACAAA ATGACATTAAAAAAATTGTTGCATTTTCCACATCAAGCCAATTAGGATTAATAATAGTAACAATTGGAAT TAACCAACCCTACCTAGCATTTCTTCATATTTGTACTCACGCATTCTTTAAAGCAATATTATTTATATGC TCTGGCTCGATCATTCACAATCTAAATGATGAACAAGACATTCGAAAAATAGGAGGACTATTTAAAGCTC TACCCTTTACCTCCTCATCCTTAATAGTAGGAAGCCTTGCACTAACAGGTACACCATTCCTAACAGGATT TTACTCAAAAGACTTAATCATTGAGTCTGCAAACACGTCATATACCAACGCCTGAGCCCTATCTATTACT CTAATTGCCACATCCCTAACAGCCATTTATAGCACACGCATTATCTTCTTTGCATTAATAGGACAACCAC GATTCTCACCTCTTATTATCATTAATGAAAACAATCCACAAATAATTAACTCAATTAAACGCCTCCTAAT TGGTAGTATTATTGCAGGATTTCTACTAACATTTAATATTCCTCCAATAAATGTACCAATTATAACTATA CCCTTATATCTAAAAATTACAGCCCTATTTGTCACCTTAATAGGATTCACAATTGCTATAGAACTAAATC AACTAACACTAAACTTAAAAATAACATTCTATTCAAATATACCTATATTTTCTACTCTTTTAGGATACTT CCCTTCTATTACCCATCGTATTTATCCTTACCTGAATCTTACTGCGAGCCAAAAACTAGCATCAACTCTA CTAGACCTAATTTGAATAGAAAAAACAATCCCAAAATTGACCGCCAATTTTCACTCAACAGCCTCAACTA TAACTTCTAACCAAAAGGGCCTAATTAAACTATACTTTTTATCATTTTTAATTTCAATCATCCTAATAAC CATTATCATAATCTACCTCCACGAGTAATCTCAATAACAATAAAAATGCTTACAAACAACGACCAACCAG CCACAACTATTATTCAACTTCCACAACTATACATTGCTGCAACTCCTATAGAATCTTCACGAATTAAACC TAACTCATCACCATCAAACAACATTCAATTATCTGAATTACCTAATTCAACAACAATATCTACCCCATCA TGAAACATTATAAATAATATAATTATAACCTCCACCCAAAACCCTAATAACAATACACCCCAGATAACAG CATTTGAACTTCAAGTCTCAGGGTACTCCTCAGTAGCTATAGCAGTTGTGTAACCAAACACCACTAATAT CCCCCCTAAATAAATTAAAAAAACTATCAAGCCAAGGAAAGACCCACCAAAATACAACACAATACCACAT CCAACTCCACCACTAATAATTAATCCTAACCCACCATAAATAGGAGAAGGCTTTGAAGAAAACCCTACAA AACCTAACACAAACAATAAACTTAACAAGTACATAATATATGTCATTATTTTTACATGGAATCTAACCAT GACCAATGACATGAAAAATCATCGTTGTTATTCAACTATAAAAACATTAATGACAAATATCCGTAAAACT CATCCCCTCATTAAAATTATCAACCACTCATTTATTGACTTACCCACCCCATCCAACATTTCTGCATGAT GAAACTTTGGATCCCTCCTAGGCATCTGCCTAATTATCCAAATTATTACTGGATTATTTTTAGCCATACA CTACACATCAGATACCTTAACAGCTTTCTCATCTGTAACCCATATTTGCCGAGACGTAAACTACGGTTGA CTAATTCGCTACATACATGCCAACGGAGCCTCAATATTTTTTATCTGCTTATTCCTCCATGTAGGACGAG GACTATACTACGGATCCTATACTTACTTTGAAACATGAAATATTGGAGTTATTCTCCTATTCGCAGTTAT AGCTACAGCATTTATAGGCTACGTTCTTCCCTGAGGACAGATATCTTTCTGAGGAGCAACAGTTATTACT AACCTTCTATCAGCTATCCCTTATATCGGAACAACATTAGTTGAATGAATTTGAGGTGGATTTTCAGTTG ATAAAGCTACTCTAACACGATTCTTCGCATTCCACTTCATTCTTCCATTCATTATTACAGCATTAGTAAT AATTCACTTACTATTCCTCCATGAAACAGGATCTAACAACCCCTCAGGACTAATCTCTGACTCAGATAAA ATTCCCTTCCACCCATATTACACCATTAAAGATATCCTAGGAATGCTTCTCTTACTTTTATTCCTAATAA TTCTAGTCCTATTTTCCCCAGACCTTCTGGGAGACCCAGACAACTATACCCCAGCTAATCCACTTAATAC CCCACCCCACATTAAACCAGAGTGGTATTTCCTATTTGCCTATGCTATCTTACGATCAATTCCCAACAAA CTAGGAGGAGTTCTAGCACTAATCCTCTCCATTCTTATCCTCATACTGTTCCCTATTCTCCATACATCTA AACAACGCAGCATAATATTCCGACCTCTAAGTCAATGTATATTCTGAATTTTAGTAGCCGATCTATTAAC ACTCACCTGAATCGGAGGACAACCAGTGGAACACCCCTTTATCATTATTGGCCAACTAGCATCCATCCTA TACTTTTCAATTATTCTTCTAATTATACCAACCATCAGCTTATTTGAAAACAAACTCCTAAAATGATAGC CCTAATAGTATAAAATATTACTTTGGTCTTGTAAACCAAAAATGAAGCCACAACCTTCTTAGAGCATTAT TCAGGGAAGAAATTTTCCACTCCACCTTCAACTCCCAAAGCTGACATTCTATCTTAAACTATTCCCTGAC ATTTGACCAATTCCTAAACATTTAACTCTCATGTAACTATTAACTTTCGTCCAACAATCAATAGAAACCC GCTATGTAATACGTGCATTAATGCCCTACCACATTAATAATTGTCACAGTACATAATATTATTAATAATA CATAGAACATACTATGTTTAATCAACATTAAACGTCCACCCCATGCATATAAGCATGCACATCAACACCG ACATAGTACATAAACCATTACAATTTTGACCAGCACTGACTATGTTTTTCCATACGGATATGATTGTAAT ACATAAAATCCTTAATAGTACATAGTACATTCCAATTCACTTGCGGTACATGCCCCATTTTCGTCATATA CCTTTCACGTTCCAAATGACTATCCCCTTCCATTATGTGGTCTCTTAATCTACCAACCTCCGTGAAATCA GCAACCCGCCAGAGTCATGCCTCTCTTCTCGCTCTGCGCCCATGAACCTTGGGGGTCGCTAGACTGAAAC TATAACTGGCATCTGGTTCCTACCTCAGGGCCATATCATGCGTAATCGCCCACTCGTTCCCCTTAAATAA GACATCACGATGCTTTGGGACTATTCCGTCCGTGAAATGTCAATCCTTGCACTGGCGTGCCTAACGTATT TTTATTTTTTGGGGTATGCTTCGACTCACCAATGGCCGTCAGAGGCCTTAACACAGTCATCCCAATTGTA GCTGGACTTCATAGTCACTATGTTTTATCAGCATATTTACCAGCAGGTTATTCAGAGTCCATGCTTGTAG ACATAAAATGATTTAAAACAGAATTTCTACTGAAGCGAACAAATTATTAACCTAATTTCCCCTCCCACAG ATAATAAAAATTAAATATAATTTTTCTTCTTCTTATATGTATATTAATTTCTTAACTCGCTCATCAGTAG ATTTAATAACTTGTTCCCCAAACCTATTATTTTAATAGTCTTCTTCTATCATTTAATATTTTGTCAAATT ACTCAACTTACTATTACAAAATTCTAACTTTATCAATCTTACCTCATTAAAATATTTACTAACATACTAC TTCATAAACCTCACTCTATATAAATATATTAACACTAG
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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