Viewing data for Pseudomys chapmani


Scientific name Pseudomys chapmani
Common name Western pebble-mound mouse
Maximum lifespan 6.80 years (Pseudomys chapmani@AnAge)

Total mtDNA (size: 16249 bases) GC AT G C A T
Base content (bases) 5856 10391 3925 1931 4538 5853
Base content per 1 kb (bases) 360 639 242 119 279 360
Base content (%) 36.0% 63.9%
Total protein-coding genes (size: 11328 bases) GC AT G C A T
Base content (bases) 4138 7190 2924 1214 3229 3961
Base content per 1 kb (bases) 365 635 258 107 285 350
Base content (%) 36.5% 63.5%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1493 bases) GC AT G C A T
Base content (bases) 490 1003 282 208 438 565
Base content per 1 kb (bases) 328 672 189 139 293 378
Base content (%) 32.8% 67.2%
Total rRNA-coding genes (size: 2517 bases) GC AT G C A T
Base content (bases) 904 1612 500 404 624 988
Base content per 1 kb (bases) 359 640 199 161 248 393
Base content (%) 35.9% 64.0%
12S rRNA gene (size: 953 bases) GC AT G C A T
Base content (bases) 353 600 197 156 230 370
Base content per 1 kb (bases) 370 630 207 164 241 388
Base content (%) 37.0% 63.0%
16S rRNA gene (size: 1564 bases) GC AT G C A T
Base content (bases) 551 1012 303 248 394 618
Base content per 1 kb (bases) 352 647 194 159 252 395
Base content (%) 35.2% 64.7%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 239 442 170 69 214 228
Base content per 1 kb (bases) 351 649 250 101 314 335
Base content (%) 35.1% 64.9%
ATP8 (size: 192 bases) GC AT G C A T
Base content (bases) 58 134 48 10 55 79
Base content per 1 kb (bases) 302 698 250 52 286 411
Base content (%) 30.2% 69.8%
COX1 (size: 1545 bases) GC AT G C A T
Base content (bases) 610 935 372 238 460 475
Base content per 1 kb (bases) 395 605 241 154 298 307
Base content (%) 39.5% 60.5%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 248 436 160 88 195 241
Base content per 1 kb (bases) 363 637 234 129 285 352
Base content (%) 36.3% 63.7%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 300 484 192 108 238 246
Base content per 1 kb (bases) 383 617 245 138 304 314
Base content (%) 38.3% 61.7%
CYTB (size: 1144 bases) GC AT G C A T
Base content (bases) 432 712 297 135 328 384
Base content per 1 kb (bases) 378 622 260 118 287 336
Base content (%) 37.8% 62.2%
ND1 (size: 955 bases) GC AT G C A T
Base content (bases) 349 606 247 102 279 327
Base content per 1 kb (bases) 365 635 259 107 292 342
Base content (%) 36.5% 63.5%
ND2 (size: 1036 bases) GC AT G C A T
Base content (bases) 347 689 277 70 280 409
Base content per 1 kb (bases) 335 665 267 68 270 395
Base content (%) 33.5% 66.5%
ND3 (size: 348 bases) GC AT G C A T
Base content (bases) 123 225 86 37 106 119
Base content per 1 kb (bases) 353 647 247 106 305 342
Base content (%) 35.3% 64.7%
ND4 (size: 1375 bases) GC AT G C A T
Base content (bases) 485 890 353 132 394 496
Base content per 1 kb (bases) 353 647 257 96 287 361
Base content (%) 35.3% 64.7%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 112 185 83 29 93 92
Base content per 1 kb (bases) 377 623 279 98 313 310
Base content (%) 37.7% 62.3%
ND5 (size: 1821 bases) GC AT G C A T
Base content (bases) 654 1167 486 168 518 649
Base content per 1 kb (bases) 359 641 267 92 284 356
Base content (%) 35.9% 64.1%
ND6 (size: 519 bases) GC AT G C A T
Base content (bases) 194 325 161 33 88 237
Base content per 1 kb (bases) 374 626 310 64 170 457
Base content (%) 37.4% 62.6%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%)
Alanine (Ala, A)
n = 13 (5.75%)
Serine (Ser, S)
n = 16 (7.08%)
Threonine (Thr, T)
n = 20 (8.85%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (4.87%)
Leucine (Leu, L)
n = 44 (19.47%)
Isoleucine (Ile, I)
n = 29 (12.83%)
Methionine (Met, M)
n = 13 (5.75%)
Proline (Pro, P)
n = 15 (6.64%)
Phenylalanine (Phe, F)
n = 11 (4.87%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 2 (0.88%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 8 (3.54%)
Glutamine (Gln, Q)
n = 7 (3.1%)
Histidine (His, H)
n = 9 (3.98%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 9 12 6 3 22 1 12 7 0 1 2 7 1 10 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 4 3 6 0 2 2 6 0 2 1 11 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 9 0 3 2 6 0 1 4 0 2 0 0 4 4 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 2 0 3 1 1 0 3 1 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
40 68 79 40
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 59 37 108
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 43 112 66
ATP8 (size: 192 bases)
Amino acid sequence: MPQLDTSTWFITIVSSMITLFILFQLKISSQTFPMPPSPKHMTTLNTKNPWESKWTKIYLPLL*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 7 (11.11%)
Threonine (Thr, T)
n = 9 (14.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.59%)
Leucine (Leu, L)
n = 8 (12.7%)
Isoleucine (Ile, I)
n = 6 (9.52%)
Methionine (Met, M)
n = 4 (6.35%)
Proline (Pro, P)
n = 7 (11.11%)
Phenylalanine (Phe, F)
n = 4 (6.35%)
Tyrosine (Tyr, Y)
n = 1 (1.59%)
Tryptophan (Trp, W)
n = 3 (4.76%)
Aspartic acid (Asp, D)
n = 1 (1.59%)
Glutamic acid (Glu, E)
n = 1 (1.59%)
Asparagine (Asn, N)
n = 2 (3.17%)
Glutamine (Gln, Q)
n = 3 (4.76%)
Histidine (His, H)
n = 1 (1.59%)
Lysine (Lys, K)
n = 5 (7.94%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 3 3 1 0 2 0 5 3 0 0 1 0 0 2 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 0 0 0 0 0 0 0 2 1 3 1 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 8 1 0 2 4 1 0 0 1 0 0 0 0 2 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 0 1 0 5 0 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
3 14 26 21
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 23 15 23
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 11 38 11
COX1 (size: 1545 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 33 (6.42%)
Threonine (Thr, T)
n = 39 (7.59%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 39 (7.59%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 36 (7.0%)
Methionine (Met, M)
n = 29 (5.64%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
18 18 25 10 7 23 2 16 5 1 9 6 23 1 19 23
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 0 11 17 14 0 7 7 30 2 5 1 22 0 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 24 0 4 5 21 0 2 1 11 9 1 1 5 12 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 9 0 5 10 10 0 2 0 6 0 0 0 1 0 16
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
151 102 134 128
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
75 139 96 205
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 131 245 127
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 10 (4.41%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 12 (5.29%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 11 13 10 3 10 1 9 6 0 2 2 6 2 5 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 3 5 3 2 0 0 3 5 0 2 1 11 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 12 0 3 2 9 0 2 2 5 4 0 0 7 2 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 14 1 4 7 5 0 2 0 4 0 0 0 0 1 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
56 56 68 48
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 55 62 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 49 111 62
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 22 (8.46%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 14 (5.38%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 11 (4.23%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 21 (8.08%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 7 9 7 2 14 1 10 7 0 3 2 9 0 15 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 2 1 4 10 0 3 3 13 1 1 2 7 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 11 0 7 2 9 0 1 3 5 7 0 1 2 5 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 7 0 3 1 4 0 0 1 4 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 63 62 76
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 63 58 97
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 66 126 64
CYTB (size: 1144 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 19 (5.0%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 32 (8.42%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 17 (4.47%)
Leucine (Leu, L)
n = 53 (13.95%)
Isoleucine (Ile, I)
n = 42 (11.05%)
Methionine (Met, M)
n = 17 (4.47%)
Proline (Pro, P)
n = 22 (5.79%)
Phenylalanine (Phe, F)
n = 29 (7.63%)
Tyrosine (Tyr, Y)
n = 14 (3.68%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 11 (2.89%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.47%)
Glutamine (Gln, Q)
n = 7 (1.84%)
Histidine (His, H)
n = 14 (3.68%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 25 16 3 3 33 2 11 6 1 5 3 9 0 14 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 2 2 9 8 0 1 2 20 2 4 2 16 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 20 0 4 5 13 0 1 1 6 8 0 1 4 13 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 6 0 4 7 9 0 0 0 8 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
78 92 119 92
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 95 78 158
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 110 187 77
ND1 (size: 955 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 23 (7.26%)
Serine (Ser, S)
n = 28 (8.83%)
Threonine (Thr, T)
n = 21 (6.62%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 12 (3.79%)
Leucine (Leu, L)
n = 56 (17.67%)
Isoleucine (Ile, I)
n = 26 (8.2%)
Methionine (Met, M)
n = 21 (6.62%)
Proline (Pro, P)
n = 21 (6.62%)
Phenylalanine (Phe, F)
n = 23 (7.26%)
Tyrosine (Tyr, Y)
n = 13 (4.1%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 12 (3.79%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 14 20 5 4 31 2 14 7 0 1 1 9 1 10 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 4 8 10 1 1 4 6 1 2 1 18 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 13 0 1 5 18 0 2 2 6 7 0 0 5 7 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 10 1 1 2 7 0 0 1 7 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 82 91 84
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
34 89 57 138
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 76 179 56
ND2 (size: 1036 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 15 (4.36%)
Serine (Ser, S)
n = 24 (6.98%)
Threonine (Thr, T)
n = 46 (13.37%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 59 (17.15%)
Isoleucine (Ile, I)
n = 44 (12.79%)
Methionine (Met, M)
n = 28 (8.14%)
Proline (Pro, P)
n = 21 (6.1%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 9 (2.62%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 21 (6.1%)
Glutamine (Gln, Q)
n = 13 (3.78%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 24 26 10 6 30 0 13 12 1 1 0 4 0 6 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 0 5 10 0 0 3 9 1 2 2 17 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 26 0 1 4 15 0 4 0 5 4 0 0 7 14 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 4 0 0 0 12 0 0 0 3 0 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
37 89 155 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 102 65 149
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 86 189 66
ND3 (size: 1036 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 15 (4.36%)
Serine (Ser, S)
n = 24 (6.98%)
Threonine (Thr, T)
n = 46 (13.37%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 59 (17.15%)
Isoleucine (Ile, I)
n = 44 (12.79%)
Methionine (Met, M)
n = 28 (8.14%)
Proline (Pro, P)
n = 21 (6.1%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 9 (2.62%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 21 (6.1%)
Glutamine (Gln, Q)
n = 13 (3.78%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 24 26 10 6 30 0 13 12 1 1 0 4 0 6 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 0 5 10 0 0 3 9 1 2 2 17 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 26 0 1 4 15 0 4 0 5 4 0 0 7 14 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 4 0 0 0 12 0 0 0 3 0 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
37 89 155 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 102 65 149
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 86 189 66
ND4 (size: 1375 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.94%)
Alanine (Ala, A)
n = 20 (4.38%)
Serine (Ser, S)
n = 41 (8.97%)
Threonine (Thr, T)
n = 43 (9.41%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 9 (1.97%)
Leucine (Leu, L)
n = 83 (18.16%)
Isoleucine (Ile, I)
n = 53 (11.6%)
Methionine (Met, M)
n = 40 (8.75%)
Proline (Pro, P)
n = 19 (4.16%)
Phenylalanine (Phe, F)
n = 17 (3.72%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 11 (2.41%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 24 (5.25%)
Glutamine (Gln, Q)
n = 11 (2.41%)
Histidine (His, H)
n = 14 (3.06%)
Lysine (Lys, K)
n = 15 (3.28%)
Arginine (Arg, R)
n = 9 (1.97%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
22 31 34 12 3 46 3 18 11 0 2 1 5 1 10 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 3 4 12 4 0 2 5 9 2 2 1 13 3 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 24 0 6 7 17 0 7 4 6 9 4 1 8 16 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 8 0 2 3 15 0 2 0 7 0 0 0 0 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 117 186 95
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
52 112 92 202
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 124 218 96
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 10 (10.2%)
Threonine (Thr, T)
n = 11 (11.22%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 4 (4.08%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 1 (1.02%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 1 7 4 4 11 0 2 2 0 0 0 4 0 3 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 2 2 2 4 0 0 0 4 0 1 1 0 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 3 0 2 5 3 0 0 0 2 1 0 1 0 6 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 2 0 1 0 1 0 0 1 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
19 25 31 24
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
8 31 17 43
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
2 27 44 26
ND5 (size: 1821 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (4.29%)
Alanine (Ala, A)
n = 34 (5.61%)
Serine (Ser, S)
n = 54 (8.91%)
Threonine (Thr, T)
n = 61 (10.07%)
Cysteine (Cys, C)
n = 8 (1.32%)
Valine (Val, V)
n = 14 (2.31%)
Leucine (Leu, L)
n = 91 (15.02%)
Isoleucine (Ile, I)
n = 61 (10.07%)
Methionine (Met, M)
n = 43 (7.1%)
Proline (Pro, P)
n = 24 (3.96%)
Phenylalanine (Phe, F)
n = 36 (5.94%)
Tyrosine (Tyr, Y)
n = 18 (2.97%)
Tryptophan (Trp, W)
n = 13 (2.15%)
Aspartic acid (Asp, D)
n = 10 (1.65%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 43 (7.1%)
Glutamine (Gln, Q)
n = 14 (2.31%)
Histidine (His, H)
n = 11 (1.82%)
Lysine (Lys, K)
n = 25 (4.13%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
28 33 41 20 11 41 1 17 14 0 5 1 8 0 18 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 4 4 5 18 11 0 0 7 15 4 6 4 14 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
24 28 0 6 9 31 0 1 7 9 9 0 1 16 27 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 10 1 4 6 25 0 1 2 6 0 0 0 1 0 13
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
95 131 241 140
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
64 165 133 245
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 190 275 133
ND6 (size: 519 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (15.12%)
Alanine (Ala, A)
n = 9 (5.23%)
Serine (Ser, S)
n = 8 (4.65%)
Threonine (Thr, T)
n = 5 (2.91%)
Cysteine (Cys, C)
n = 3 (1.74%)
Valine (Val, V)
n = 22 (12.79%)
Leucine (Leu, L)
n = 30 (17.44%)
Isoleucine (Ile, I)
n = 15 (8.72%)
Methionine (Met, M)
n = 7 (4.07%)
Proline (Pro, P)
n = 3 (1.74%)
Phenylalanine (Phe, F)
n = 9 (5.23%)
Tyrosine (Tyr, Y)
n = 9 (5.23%)
Tryptophan (Trp, W)
n = 7 (4.07%)
Aspartic acid (Asp, D)
n = 6 (3.49%)
Glutamic acid (Glu, E)
n = 8 (4.65%)
Asparagine (Asn, N)
n = 3 (1.74%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 1 (0.58%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 1 2 4 0 0 0 9 0 0 16 0 1 5 9 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 3 0 5 0 3 1 10 1 4 11 3 0 0 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 0 0 5 0 0 0 3 0 9 0 5 17 3 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 6 6 0 1 0 0 0 1 0 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
71 8 34 60
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
40 22 28 83
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
50 3 26 94
Total protein-coding genes (size: 11381 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 211 (5.57%)
Alanine (Ala, A)
n = 215 (5.67%)
Serine (Ser, S)
n = 293 (7.73%)
Threonine (Thr, T)
n = 335 (8.84%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 165 (4.35%)
Leucine (Leu, L)
n = 595 (15.7%)
Isoleucine (Ile, I)
n = 364 (9.6%)
Methionine (Met, M)
n = 240 (6.33%)
Proline (Pro, P)
n = 192 (5.06%)
Phenylalanine (Phe, F)
n = 224 (5.91%)
Tyrosine (Tyr, Y)
n = 128 (3.38%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 71 (1.87%)
Glutamic acid (Glu, E)
n = 92 (2.43%)
Asparagine (Asn, N)
n = 174 (4.59%)
Glutamine (Gln, Q)
n = 86 (2.27%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 101 (2.66%)
Arginine (Arg, R)
n = 64 (1.69%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
180 184 213 95 47 274 14 142 83 3 45 20 89 11 124 100
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
27 12 17 47 82 84 2 26 37 123 25 34 18 135 5 67
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
82 185 1 44 50 148 1 25 25 66 62 11 23 62 112 35
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
66 83 9 33 38 100 1 8 6 49 1 0 0 7 1 93
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
754 873 1264 901
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
458 985 761 1588
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
135 946 1808 903 

>NC_014698.1 Pseudomys chapmani mitochondrion, complete genome
GTTAATGTAGCTTATCAACAAAGCAAAGCACTGAAAATGCTTAGATGGATTTTAAAAATCCCATAAACAC
AAAGGTTTGGTCCTGGCCTTATAGTTAATTAGAGATAAGATTACACATGCAAATATCCATAAGCCAGTGC
AAAATCCCTTAAATATTTATACTAAATTTTAAGGAGAGGGTATCAAGCACATAAAAATAGCTCAAGACAC
CTTGCCAAGCCACACCCCCACGGGACTCAGCAGTGATAAACATTAAGCAATGAACGAAAGTTTGACTAAG
CTATATCTCTTAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAACTATA
TACGGCGTAAAACGTGTAGAATATGCATAACAAAATAGAATTAAAACCTAACTAATATGTGAAAATCCTT
TGTTAAAACCTAAATTCAATAACGAAAGTAATTCTAATAAAACAAATTACACGATAGCTAAGATCCAAAC
TGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTAAATGATTACATAACAAAACCATTTGCCAGAGA
ACTACTAGCCACAGCTTAAAACTCAAAGGACCTGGCGGCACTTTATATCCATCTAGAGGAGCCTGTTCTA
TAATCGATAATCCCCGCTCTACCTCACCATCTCTTGCTAATTCAGTCTATATACCGCCATCTTCAGCAAA
CCCTAAAAAGGTACCAAAGTAAGCACAAGAATCAAACATAAAAACGTTAGGTCAAGGTGTAACCAATGAG
GTGGAAAGAAATGGGCCACATTTTCTTAACAAGAACACAACGAAACCCTTTATGAAACTAAAGGATAAAG
GAGGATTTAGTAGTAAATTAAGAGTAGAGAGCTTAATTGAATAGAGCAATGAAGTGCGCACACACCGCCC
GTCACCCTCCTCAAACTAAATTTATCTTATAATAAATAATACAAAAACTCAATTTACGAGAGGAGATAAG
TCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAATAATCATAGTGTAGCTTAATATAAAGCACCTG
GCTTACACCCAGGAGAATTCATAAAAATGAACACTTTGAACCAAGTCTAGCCCCAATAAAATTACATATA
ACTACACTAATTTACTAAATCAAAACATTCAACCAGTTACAAGTATTGGAGAAAGAAACTTACCACGGGA
GCTATAGAGAAAGTACCGTAAGGGAAAGATGAAAGACCACTTAAAAGTGATAAAAAGCAAAGATAAACCC
TTGTACCTTTTGCATAATGAGTTAACTAGAAAACTCCTAACTAAACGAATTTAAGCTAGGAACCCCGAAA
CCAAACGAGSTACCTAAAAACAATTTATCGAATCAACCCATCTATGTGGCAAAATAGCGGGATGATTTTT
AGGTAGAGGTGAAAAGCCAAACGAGCTTGGTGATAGCTGGTTACCCAAAAAATGAATATCAGTTCAACTT
TAAATTTACTAAAAGAACACCTAATCCCTACGTAAATTTTAAAATTTAGCCAAAAGAGGGACAGCTCTTT
AGGAAAGGAAAAAACCTTAAATAGTGAATAAACAAAAACTTATCATTAAACCATTGTAGGCCTTAAAGCA
GCCACCAATAAAGAAAGCGTTCAAGCTCAACACTAAAAAATTACAAATTCCATACACATCAATAAATTCC
TATATAATTAACTGGGTTAATCTATAAAATTATAGATGTAATACTGTTAATATGAGTAACAAGAATATAA
TTCTCCAAGCACAAGTGTATAACAACACGGATAACCATTGTTATTTATCACACCACAGGTATTATTCCAA
AAATAAAACTACCTATTACTAACTTGTTAATCCGACACAGGAGTGCTCTAAGGAAAGATTAAAAAAAATA
AAAGGAACTCGGCAAACCTGAATCCCGCCTGTTTACCAAAAACATCACCTCTAGCATTACAAGTATTAGA
GGCACTGCCTGCCCAGTGAAAATTTTAAACGGCCGCGGTATTCTGACCGTGCAAAGGTAGCATAATCACT
TGTTCCTTAATTAGGGACTAGCATGAACGGCTAAACGAGGATTCAACTGTCTCTTATTTTAAATCAGTGA
AATTGACCTTCCAGTGAAGAGGCTGGAATACAAAAATAAGACGAGAAGACCCTATGGAGCTTAAATTAAA
AGTTTAATTTTTTATCTAACAACCTAATGGTTCAACAAAAAACTCTAAACTTAAAATTTCGGTTGGGGTG
ACCTCGGAGAACAAAAAATCCTCCGAATGATTATAACTAAGACACACAAGTCAAAGTAAGAAACCTATCT
TATTGACCCATAAACTTGAACAATGGACCAAGTTACCCTAGGGATAACAGCGCAATCCTATTTTAGAGTC
CATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGCGCAAAAGCTATTAAT
GGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCT
ATCTATTTACAATTTCTCCCAGTACGAAAGGACAAGAGAAATAGAGCCAACTTTTCAAAAGCGCTCTCAA
CATAAACTATGAACTAAATCTCAATAAAATATATATGTACAAAACACCAACCTAGATAAGGTTATTAGGG
TGGCAGAGCCAGGAAATTGCATAAGATTTAAAACCTTTCAACCAGAGGTTCAAATCCTCTCCCTAATAGT
GTACTTTATTAATATATTAGCTTTCCTACTTCCAATTCTAGTCGCCATAGCCTTCTTAACTTTAGTAGAA
CGAAAAATCCTAGGCTATATACAACTACGAAAAGGACCAAACATTGTAGGACCATACGGCATATTCCAAC
CATTTGCCGATGCTATGAAACTTTTCATAAAAGAATCAACACGCCCACTAACAACTTCAATTTCACTATT
CATCATTGCACCAACACTATCACTAACACTAGCATTAAGTCTATGAATCCCTCTTCCAATACCTCATCCA
CTAATCAACCTAAACCTGGGAATCCTATTTATTCTAGCGACATCAAGCCTATCAGTATATTCCATTTTAT
GATCAGGATGAGCATCCAACTCAAAATACTCATTATTCGGTGCCCTGCGAGCAGTAGCCCAAACAATCTC
ATACGAAGTAACCATAGCTATCATCCTACTATCAGTACTCCTAATAAGCGGGTCATTTTCACTACAAACA
CTTATATTTTCCCAAGAACAAATATGACTAATTATCCCAACCTGACCATTAGCCCTAATATGATATATTT
CAACCCTAGCAGAAACAAACCGATCCCCATTTGACCTAACCGAAGGAGAATCCGAACTAGTATCTGGCTT
CAATGTTGAATATGCAGCTGGCCCATTCGCACTTTTCTTTATAGCCGAATACACCAATATCATCCTCATA
AATGCCCTAACAACTATTGTATTCTTAGGACCCCTATACAACATATTTATACCAGAGCTCTACTCAATTA
ATTTTATAACAAAAACACTCCTACTATCAATCACATTTCTATGAATCCGAGCATCATATCCACGATTCCG
ATATGACCAATTAATACACTTACTATGAAAAAACTTCTTACCATTAACACTAGCATTATGTATATGACAT
GTATCATTACCAATTTTCATAGCAAGTATCCCACCACACATATAGAAATATGTCTGATAAAAGAATTACT
TTGATAGAGTAAAACATAGAGGTTCAAGTCCTCTTATTTCTAGAACAATAGGACTTGAACCTACTCCTAA
GAATCCAAAATTCTTCGTGCTACCAAGACACCACGTTCTATAGTAAGGTCAGCTAATTAAGCTATCGGGC
CCATACCCCGAAAACGTTGGTTTAAATCCTTCCCGTACTAATTAATCACATCACCCTTATCATCATTTAC
TTTACCATCCTTATGGGACCTGTAATTACAATATCAAGTACCAACCTACTACTTATATGAACCGGACTAG
AAATAAGTCTCCTAGCAATTATCCCACTATTAATCAACAAAAAAAACCCACGATCAACTGAAGCAGCAAC
TAAATATTTCATCACACAATCCACAGCCTCTATAATCATACTTCTAGCCATTATTCTAAACTATAAACAA
CTAGGGTTATGAACATTTCAACAACAAACAAACAATATATTAATTAACATAACATTAATCGCACTATCAA
TAAAACTAGGAGTTGCACCATTCCACTACTGACTCCCAGAAGTAACACAGGGCATTCCCCTCCACACAGG
ATTAATTATTCTCACATGACAAAAAATCGCCCCATTATCAATCTTAATTCAAATATATCAACTTCTAAAT
CCAACCGCCACTCTAATTCTAGCAGTATTATCAATCTTCACAGGAGCATGAGGAGGCATAAATCAAACAC
AAACCCGAAAAATCATAGCATTTTCATCCATCGCCCATATAGGATGAATACTAGCAATCCTACCATTCAA
TCCAACTATTTCACTACTAAACCTAACAATTTATATCATCACAACTATTCCAATATTTATAGTACTTATA
ACTTTTAACTCCACAACCATCAACTCAATCTCACTTCTATGAAATAAAACACCAATAATGACAACAATTA
CCCCACTAATTCTAATATCACTAGGAGGCCTACCACCATTAACAGGATTCTTACCAAAATGAATTACCAT
TACAGAACTACTAAAAAACAACTGCCTAATCCTAACAACAATAATAACCATCATAGCATTACTTAATTTA
TTCTTCTACACCCGACTAATTTACTCAACCTCAATAACAATCTTTCCAACTAACAGTAACTCAAAAATAA
TATCACATACTACACACCAAAAATATAACCCAATACTCCCTCTTCTAACAATAATCAGTACACTCACACT
ACCACTTTCACCCCAATTAATCTCCTAGAAGTTTAGGATATAAAGTCCAAGAGCCTTCAAAGCCCTAAGA
AAACACATAGTTTAACTTCTGATAAGGTCTGTAAGATTACACCTTACATCTACTGAATGCAAATCAGTTA
CTTTTATTAAGCTAAAACCTCCCCTAGATTGATAGGACTTAAACCTACGAAATTTTAGTTAACAGCTAAA
TACCCTACACTGGCTTCAATCTACTTCTCCCGCCTAATAGAAAAGAGGCGGGAGAAGCCTTAGTAGAATT
ATTTATCTACACCTTCGAATTTGCAATTCGACATGAACATCACCTTAAGGCTATGATAAAAAGAGGATTA
TAACCTCTGTACTTAGATTTACAGTCTAATGCCTACTCAGCCATTTTACCTATGTTCGTAAACCGTTGAC
TATTTTCAACTAATCACAAAGATATTGGAACCCTATACCTATTATTTGGTGCCTGAGCAGGAATAGTCGG
AACAGCCCTTAGTATTCTAATTCGAGCTGAACTAGGACAGCCAGGTGCTCTTTTAGGAGACGACCAAATT
TATAATGTAATCGTTACAGCCCATGCATTTGTCATAATTTTCTTTATAGTAATACCAATAATAATTGGCG
GCTTCGGAAACTGACTCGTACCACTAATAATTGGAGCCCCAGACATAGCATTTCCACGAATAAATAACAT
AAGTTTCTGACTTCTTCCACCATCATTCCTCCTACTCCTAGCATCTTCAACAGTAGAAGCTGGAGCAGGG
ACAGGGTGAACTGTTTACCCACCTCTAGCTGGCAACCTAGCACATGCCGGAGCATCAGTAGACCTAACAA
TCTTTTCTCTACACCTAGCAGGTGTCTCATCCATCCTAGGAGCCATCAACTTCATCACTACTATTATTAA
TATAAAACCACCAGCCATAACTCAATATCAAACACCATTATTTGTTTGATCCGTATTAATCACCGCCGTC
TTACTGCTTCTTTCACTCCCAGTTCTCGCTGCAGGAATTACAATACTACTAACAGACCGAAACCTTAATA
CAACCTTCTTTGATCCTGCAGGAGGAGGAGACCCAATCCTCTACCAACATTTATTTTGATTCTTTGGCCA
CCCAGAAGTATATATTTTAATTTTACCAGGATTTGGAATTATCTCACATGTAGTAACTTACTACTCAGGA
AAAAAAGAACCATTCGGATATATAGGAATGGTATGAGCCATAATATCTATCGGCTTCCTAGGTTTTATTG
TATGAGCACATCACATATTTACAGTTGGTATGGATGTAGATACACGAGCCTATTTTACATCAGCCACTAT
AATCATTGCTATTCCCACTGGAGTTAAAGTATTCAGCTGACTAGCAACTTTACATGGAGGAAACATCAAA
TGATCACCAGCTATATTATGAGCCTTAGGCTTTATCTTTTTATTCACAGTTGGAGGCTTGACTGGAATCG
TATTATCAAACTCATCACTTGACATTGTACTTCACGACACATATTATGTAGTAGCCCACTTCCACTATGT
CCTATCCATAGGAGCAGTATTTGCTATCATAGCTGGATTTGTTCACTGGTTCCCACTATTCACAGGTTAT
ACACTGAACGACACATGAGCAAAAGCTCACTTCGCTATCATATTCGTGGGAGTAAACCTAACATTCTTCC
CTCAACACTTCCTAGGTCTATCAGGAATACCTCGACGTTACTCAGACTATCCAGATGCCTACACTACATG
AAACACTATCTCCTCAATAGGATCATTCATCTCATTAACAGCCGTTTTAGTAATAATCTTTATGATTTGA
GAAGCCTTCGCCTCAAAACGAGAAGTATTATCAGTCTCCTACACATCAACAAACCTCGAATGACTTCACG
GATGTCCACCACCATATCACACATTCGAAGAACCTTCTTACGTAAAAACAAAATAAGAAAGGAAGGACTC
GAACCCCCTAAAATTGGTTTCAAGCCAATCTCATAACCGCTATGTCTTTCTCCATAAGATATTAGTAAAA
AAATTACATAACTTTGTCAAAGTTAAATTATAGTATAAAGTCTATATATCTTATATGGCATACCCATTTC
AATTAGGCCTTCAAGATGCTACATCACCCATCATAGAAGAACTTACAAATTTTCATGATCATACATTAAT
AATCGTGTTTCTCATTAGTTCCCTAGTGCTATATATTATCTCACTTATATTAACAACAAAATTAACTCAC
ACAAGCACAATAGACGCCCAAGAAGTAGAAACAATTTGAACTATTCTACCAGCCGCTATTCTTATCCTAA
TTGCCCTACCATCACTACGAATTCTATATATAATAGACGAAATCAATAACCCAGTCCTAACAGTAAAAAC
TATAGGCCATCAATGATACTGAAGCTATGAGTATACAGACTACGAAGACTTATGCTTTGACTCTTATATA
ATCCCAACAAACGAATTAAAACCAGGAGAACTCCGTCTTTTAGAAGTAGATAATCGAGCTGTACTTCCAA
TAGAACTGCCAATCCGTATACTAATCTCATCAGAAGACGTTCTTCACTCATGAGCTGTTCCATCTTTAGG
ACTCAAAACTGACGCAATCCCAGGACGATTAAATCAAGCTACCGTCACATCAAATCGACCAGGACTTTTC
TACGGCCAATGCTCCGAAATCTGCGGATCTAATCACAGTTTTATACCTATTGTACTTGAAATAGTACCTC
TAAAAGATTTCGAAAATTGATCAATCCTTATATCATAGACTCACTATGAAGCTAAGAGCGTTAACCTTTT
AAGTTAAAATTAGAGACTTTAAATCTCCATAGTGACATGCCGCAATTAGATACATCCACATGATTTATCA
CAATTGTCTCGTCAATAATCACATTATTCATTCTATTTCAACTAAAAATTTCCTCACAAACATTCCCAAT
ACCCCCATCACCAAAACATATAACAACATTAAACACAAAAAACCCTTGAGAATCAAAATGAACGAAAATC
TATTTACCTCTTTTATAACTCCTACAGTAATAGGCCTACCAGTCGTAATCACTATTATTATATTTCCATC
AATTCTATTTCCATCCTCAGAACGACTAATCAGCAACCGTCTCCACTCATTCCAACACTGACTGATTAAG
CTCATTATCAAACAATTAATATTAATTCATTCACCAAAAGGACGAACTTGAGCATTAATAATTGTCTCCC
TAATTATATTTATTGGATCAACAAACCTTCTAGGACTACTACCACATACTTTTACACCAACCACTCAACT
ATCTTTAAACTTAAGCATAGCAATCCCGCTTTGAGCAGGAGTTGTAATCCTAGGCCTTCGACACCAACTA
AAAAATTCTTTAGCTCATTTTCTTCCACAAGGAACCCCAATTCCTCTTATTCCCATACTAATTATCATTG
AAACCATTAGCCTCTTAATTCAACCAATAGCACTAGCAGTACGGCTAACAGCCAATATCACAGCAGGTCA
CCTACTAATACATCTAATTGGAGGTGCTACCATAGTATTAATAGATATTAGTCCACCAACAGCTACAATC
ACATTTATTATTTTATTACTATTAACAATTCTAGAATTTGCCGTAGCCCTAATCCAAGCTTACGTGTTTA
CTCTTCTAGTAAGCCTATACTTACACGATAATTCATAATGACCCACCAAACACATGCATACCACATAGTA
AACCCAAGCCCATGACCCCTCACAGGAGCCTTTTCAGCCCTTCTTCTTACCTCAGGCCTAGTAATATGAT
TTCACTACAACTCTACCACCCTATTACTCATTGGATTACTTACAAACATACTAACAATATATCAATGATG
ACGAGATATTATTCGAGAAGGAACCTACCAAGGCCACCATACCCCTATCGTACAAAAAGGATTACGCTAC
GGAATAATTCTATTTATTATCTCTGAAGTATTTTTCTTCGCAGGATTTTTTTGAGCATTTTACCATTCAA
GCTTAGCACCAACACACGACCTTGGAAGCTGCTGACCCCCAACAGGAATTTTACCATTAAATCCACTAGA
AGTTCCACTACTAAACACATCAGTACTACTAGCATCAGGTGTATCTATCACATGAGCCCACCATAGTTTA
ATAGAAGGTAAACGAAATCATATAAACCAAGCTTTAGCAATCACCATCATACTAGGACTGTATTTTACTA
TATTACAAGCCTCAGAATATTTCGAAACATCATTCTCTATCTCAGATGGTGTCTACGGATCTACCTTTTT
TATGGCAACAGGATTTCACGGCCTACATGTAATTATTGGGTCCTCTTTTCTAATTGTATGCCTACTACGA
CAATTAAAATTCCACTTTACATCCAAACACCACTTTGGATTTGAAGCAGCAGCATGATATTGACACTTGG
TAGATGTTGTCTGACTTTTCCTTTACGTTTCAATCTATTGATGAGGATCTTACTCCCTTAGTATAATTAA
TACAACTGACTTCCAATTAGTAAAATCTGATAAACTTCAGAAGAGAGTAATCAACCTAATTATAATTATT
TTAACCAATAGCCTGTTATCTCTAATCCTAGTCTCCATCGCATTTTGACTACCTCAAGTAAACATATACA
CAGAAAAAGTAAACCCCTATGAATGTGGGTTCGACCCTACAAGTTCCGCACGCCTACCATTCTCAATAAA
ATTTTTCTTAGTAGCTATCACATTTCTACTATTCGACCTAGAAATTGCTCTCCTTCTTCCACTTCCATGA
GCTATCCAAACAACTAACACCATTACTATAACAATATCAGCCTTCATCCTAGTAACAATCTTATCTCTAG
GACTAGCTTACGAATGGTTACAAAAAGGATTAGAATGAACAGAATAACTGGTAATTAGTTTAACAAAAAT
TAATGATTTCGACTCATTAGATTATGAAAAAATTCATAATTACCAACAATGACATATACCCTTCTAAACC
TTACACTAGCCTTTTCCCTCTCACTAATAGGAACCCTTATTTTCCGCTCACACCTAATATCCACTCTCCT
ATGTCTAGAAGGAATAATATTGTCTTTATTTACTATAACTTCAATAGCTACTCTAAACTCCAACTCCATA
GCATCTCTCCCTATTCCCATTACAATTTTAGTATTTGCTGCATGCGAAGCAGCAGTAGGACTCGCCCTAC
TAGTAAAAATCTCCAACACTTATGGAACTGATTACGTACAAAACCTAAACCTTCTACAATGCTAAAAATT
ATTTTTCCTTCATTAATGCTTCTCCCACTAACTTGGTTGTCAAAAGGAAAAAAAACCTGAACCAACGTAA
CCTCCTACAGCTTCCTAATCAGTCTTACTAGTCTAACACTATTACTACATGATCAAAACTACCAAAACCA
TTCTATCACATTTTTCTCAGACAACCTGTCCACACCACTAATTATCCTAACAACCTGGCTACTGCCTCTT
ATACTAATAGCCAGCCAAAATCACATAAAAAAAGAAAAAAACATATATCAAAAAATATATATTTCAATAT
TAATTAATCTACAAATCCTTCTCATCTTAACATTCTCCGTAAATGAACTTATCCTATTTTATATCCTGTT
TGAAGCCACCCTAATCCCAACACTTATTATCATTACACGATGGGGAAACCAAACAGAACGATTAAACGCA
GGACTTTACTTCCTATTTTATACACTAGTTGGTTCAATCCCATTATTAATTGTCCTTATTTACATTCAAA
ACTCAACAGGAACCCTTAATTTCCTAATCATCTCACTAACAAATACACACATTGATAACACATGGTCTAG
TAATATTATGTGACTATCATGCATAATAGCATTTCTCGTAAAAATACCACTATACGGAGTGCACTTATGA
CTACCAAAAGCCCACGTTGAAGCCCCAATCGCAGGGTCTATGATTCTAGCTGCCATTCTACTAAAATTAG
GAGGGTATGGAATAATACGAATCTCCATCATACTAGACCCCCTAACAAAACACATGGCCTATCCATTCAT
ATTATTATCATTATGAGGCATAATCATAACAAGTTCAATTTGCCTACGTCAAACAGACCTAAAATCACTA
ATCGCTTACTCCTCAGTAAGTCATATAGCCCTAGTAATCACATCCATCATAATCCAAACCCCGTGAAGTT
TCATAGGCGCTATAATACTAATAATCGCCCATGGCCTAACCTCATCCCTACTATTTTGCCTAGCAAATTC
AAACTACGAACGTATTCACAGCCGAACAATAATTATAGCCCGAGGACTACAAACAATTTTTCCACTAATA
ACAATACTATGACTATTAGCCAGTCTAACTAACATAGCCATCCCGCCAACAATCAACCTAATCGGTGAAT
TATTTATCACCATATCATTATTTTCTTGATCTAATACCTCTATTATCCTTATTGGCCTAAACATTATCAT
CACAGCCCTATACTCAATATACATAATCATTACCACCCAACGAGGAAAATTAACTAACCATATAAACAAC
ATGCACCCGTCACACACACGAGAATTAACCCTAATAACTCTACATTTAATCCCACTTGCTCTACTTACCA
TAAGCCCAAAACTAATCATAGGCCCAATAACATGTAAATATAGTTTACAAAAAACATTAGACTGTGAATC
TAATAACAGGAAATTATACTCCTTATTTACCAAGAAAGAATACAAGAACTGCTAATTCACGTACCCGTGC
TTAAAACACATGGCTTTCTTACTTTTATAGGATAAAAGTAATCCATTGGTCTTAGGAATCAAAAATTATT
GGTGCAAATCCAAATAAAAGTAATCAACACAGCCACATCTTCAATACTAATAACCTTCATAGTATTAACC
TTCCCCATCATACTTCAATCAACTAACCTCACCAAAAATACAAACTTTCCTCTTCTAGCCATCACCGCAA
TCAAATTCTCCCTAATTCTAAGCCTCATACCTCTATTAATATTCCTATATACCAACACAGAACATGTTAT
CACCAACTGACACTGAATAACCATAAACTCAATTAAAATCTCAATAAGCTTTAAAATTGACTACTTCTCT
CTTCTATTTATATCAGTAGCCCTTTACGTAACATGATCAATCATAGAATTTTCTTCATGATATATACACT
CAGATCCCGACCTCAATCGATTTATCAAATATCTAATATTTTTCCTAATCACCATGCTAATTTTAACCTC
AGCTAACAATTTATTCCAACTTTTCATTGGCTGAGAAGGAGTAGGAATTATATCCTTCCTACTTATCGGA
TGATGATATGGGCGCTCAGACGCAAATACCGCAGCCCTACAAGCAATTCTATACAACCGAATCGGCGATA
TTGGCCTAATCCTATCAATAACATGATTTTGCCTAAATAACAACTCCTGAGAATTACAACAAATTATACT
AACTAATAATAATAACCTAATTCCTCTTATAGGACTACTAATTGCAGCTGCAGGAAAATCAGCTCAATTT
GGACTTCACCCATGACTCCCATCAGCCATAGAAGGCCCAACCCCAGTTTCCGCACTACTTCACTCAAGCA
CAATAGTTGTAGCAGGAGTTTATCTTATAGTTCGATTCCACCAACTCACATCAAATAACACTATCATTCT
AACAACAATACTATGTCTTGGAGCCATAACCACACTATTTACAGCTATCTGTGCCTTAACCCAAAACGAC
ATTAAAAAAATTGTAGCCTTCTCCACATCCAGCCAACTTGGCCTGATAATAGTAACTCTAGGGATTAACC
AACCTTATCTAGCTTTTCTCCACATCTGCACCCACGCCTTCTTTAAAGCCATATTATTTCTTTGCTCTGG
ATCAATTATCCACAGCCTAAACGATGAACAAGATATTCGAAAAATAGGGAACTTAACAAAAACCTTACCA
GCCACCTCATCCTGCCTAACTATCGGATGTTTGGCCCTCACAGGAACACCATTCCTCACTGGATTTTATT
CAAAAGACTCAATTATCGAATCAATCAACACATCCCACACAAACGCCTGAGCCCTTCTAATTACACTTAT
CGCCACAACCATAACAGCCATATACGGCATACGAATTATCTATTTCACTATAATATCAAAACCACGTTAC
CCACCAACAATCTCTATAAATGAAAACAACCCAAACATCATTAATCCTATTAAACGACTAGCATTAGGAA
GTATCTTAGCAGGATTCATCCTATCAATTAGCATTCCACCCGCCAACACTCAAACTCTTACAATACCCTG
ATACCTAAAATTCACAGCACTTATAGTCTCTATCCTAGGGTTCTTAATCTCATTAGAATTAAATAACCTT
ACCCTAAAACTTCTTCAACCTAAAAATAACATTTACTCATCATTTTCAACAGCCTTAGGCTACTACCCAA
TAATTATACACCGCATCTTACCAAAAAAAACCCTAAACTCAAGCTTTAAAACCTCATTAAACACAATAGA
CCTAATCTGACTAGAAAAAACCTTTCCAAAATCAATTTCCACCATAAATACAAATATAATCAAAACCCTA
ACAAACCAAAAAGGAATAGTAAAACTCTATTTTATGTCATTTCTAATCTCAATCCTACTATTCACCATCC
TCTGTATAATTAATCTCGAGTAACCTCAATAACAATAAAAACCCCAGCAAACAAAGACCATCCAGCAATA
ACCATTATCCAAACTGCCCAATCATACAACCCCGCAACCCCAATCCCACCCTCCAACATCATACCAACAA
TATCAACCTCATAAATCAATCAATCATCCAACTCCACCAAATCAATTAACCCTGCTCCACTAAAATAATT
AAGAAGACCAACATAAACCACTTCCACTAACAACCCAACAACCAAAGATCAAAAAACTAACCAATTAGAG
CCCCAGGTCTCAGGATACTCTTCAGTAGCCATAGCAGTAGTATACCCAAACACAACCAACATACCACCCA
AATAAATCAAAAATACAATCAAACCTAAAAAAGATCCACCTAACCCCAAAACTATAAGACACCCAATACA
ACCACAAATGATCAAACCAAGCCCACCATAAATAGGAGAAGGTTTCAAAGCCAATCCTAAACTCCCTGCC
AAAAATAATAAACTTAAAATAAAAACATAATTAATCACTATTTCCATACAGCATTTAACTGTAACTAATG
ACATGAAAAATCATCGTTGTAATTCAACTATAGAAACAAATAATGACAAACATACGAAAAACACATCCCC
TAATAAAAATCATCAACCACTCTTTTATTGACTTACCAACCCCATCCAACATCTCATCTTGATGAAACTT
TGGTTCCCTATTAGGACTATGCCTGACAATCCAAATCATCACAGGACTATTTTTAGCTATACACTACACA
TCAGATACAATAACAGCATTCTCATCAGTCACCCATATTTGTCGAGACGTAAACTACGGATGATTGATTC
GATACATACACGCAAACGGAGCCTCAATATTCTTTATCTGCCTATTCCTACACATTGGACGAGGAATATA
CTATGGATCCTACACTTTCATTGAAACTTGAAATATCGGAGTAATCTTATTATTCGCCGTTATAGCCACT
GCATTCATAGGATATGTACTCCCATGAGGACAAATATCATTTTGAGGAGCAACAGTTATTACCAACTTAT
TATCAGCCATCCCATACATCGGAACCACACTAGTAGAATGAATCTGAGGGGGATTCTCAGTAGACAAAGC
CACTCTAACACGATTTTTTGCCTTTCACTTTATTCTACCATTCATCATCACAGCCATAGTAGTTGTCCAC
CTATTATTCCTTCACGAAACAGGGTCTAACAACCCAACAGGACTAAACTCAGACGCAGATAAAATCCCAT
TTCACCCATACCATACAATTAAAGACCTCCTAGGCGTATTTATACTAGTACTACTATTTACAACACTAGT
ACTATTTTTCCCAGATCTACTAGGAGACCCAGACAATTATTCACCCGCAAACCCATTAAACACACCACCA
CACATCCAACCAGAATGATATTTCCTATTTGCATACGCTATCCTACGATCAATTCCTAATAAACTAGGAG
GCATTCTAGCCCTAATCATATCTACTTTAATCCTAATACTCCTACCTCTACTACACACATCAAAACAACG
AAGCCTGATTTTCCGACCAATTACTCAAACACTATATTGAATTCTAGTTGCAAATCTTTTAATCCTAACT
TGAATCGGAGGACAACCAGTCGAACATCCTTTCACCATCATCGGACAGCTAGCCTCCATCAGTTATTTCT
CCATTATCCTTGTTTTCATACCTATTTCAGGAATTATTGAAAACAAAATACTAAAATGAGATACATGCCC
TGATAGTATAGCCATTACCCTGGTTTTGTAAACCAAAAACGAAGATTATAATCTTCTCAAGGCATCAAGA
AGAAGGACTTATCCCTACCATCAACACCCAAAGCTGAAATTCTAATTAAACTACTTCTTGAACAGTACAT
AAAATTACATAGTACATTAAAACATTAATGTATATAGTACATTAAATTATTTTCCCCTAGCATATAAGCA
AGTATTAACCATTAATGAATTAGGAAATAAAACTATATCTCAACCCACAAATCATAAACACATGAATATT
AACAAATACATTTTAATTAATGCTTTAAAAACATATCTGTGTTATTAGACATACACCATTAAGTCATAAA
CCCTTATCTTCCACATGACTATCCCCTGCTACATTAATCTAACTATCTACCATCCTCCGTGAAACCAACA
ACCCGCCCACCAATGCCCCTCTTCTCGCTCCGGGCCCATAAAACTTGGGGGTAGCTAAACTGAAACTTTA
TCAGACATCTGGTTCTTACTTCAGGGCCATCAAAWGCGTTATCGCCCATACGTTCCCCTTAATAAGACAT
CTCGATGGTACAGGTCTAATCAGCCCATGCCCAACATAACTGTGGTGTCATGCATTTGGTATTTTTATTC
TCTTAGGATGCTGTGACTCAGCATAGCCGTCAAGGCATGAAGGTCAACCCTAAGTCTAGCTGGACTTTCT
AGTTAAGCATCATTAACCCACATAAACAAATCACCTAGACTAAATCTTAATGCTAGAAGGACATAATTTA
CAACGAATACTGAAAATGAACTCTCCAAACCCCCCCACCCCCAAAAAAACTTTGATGCCAAACCCCAAAA
ACATCAAAGCCAAAAATCACCATAAAGACAAATCTTTCAAGTACTCCACAAAATATAACTTATATTTTAG
TATTGGTAAAAAAAAACTGAAATAAAAATTTACCTAGCCAAAACTAAAACACCAATATAATCTTAACGAT
TTTTTTTAA
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.