Viewing data for Mesocricetus auratus
| Scientific name | Mesocricetus auratus |
| Common name | Golden hamster |
| Maximum lifespan | 3.90 years (Mesocricetus auratus@AnAge) |
| Total mtDNA (size: 16264 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5903 | 10361 | 3777 | 2126 | 5054 | 5307 |
| Base content per 1 kb (bases) | 363 | 637 | 232 | 131 | 311 | 326 |
| Base content (%) | 36.3% | 63.7% | ||||
| Total protein-coding genes (size: 11328 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4067 | 7261 | 2745 | 1322 | 3652 | 3609 |
| Base content per 1 kb (bases) | 359 | 641 | 242 | 117 | 322 | 319 |
| Base content (%) | 35.9% | 64.1% | ||||
| D-loop (size: 867 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 341 | 526 | 222 | 119 | 279 | 247 |
| Base content per 1 kb (bases) | 393 | 607 | 256 | 137 | 322 | 285 |
| Base content (%) | 39.3% | 60.7% | ||||
| Total tRNA-coding genes (size: 1498 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 530 | 968 | 293 | 237 | 455 | 513 |
| Base content per 1 kb (bases) | 354 | 646 | 196 | 158 | 304 | 342 |
| Base content (%) | 35.4% | 64.6% | ||||
| Total rRNA-coding genes (size: 2517 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 942 | 1575 | 505 | 437 | 656 | 919 |
| Base content per 1 kb (bases) | 374 | 626 | 201 | 174 | 261 | 365 |
| Base content (%) | 37.4% | 62.6% | ||||
| 12S rRNA gene (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 366 | 589 | 199 | 167 | 249 | 340 |
| Base content per 1 kb (bases) | 383 | 617 | 208 | 175 | 261 | 356 |
| Base content (%) | 38.3% | 61.7% | ||||
| 16S rRNA gene (size: 1562 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 576 | 986 | 306 | 270 | 407 | 579 |
| Base content per 1 kb (bases) | 369 | 631 | 196 | 173 | 261 | 371 |
| Base content (%) | 36.9% | 63.1% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 243 | 438 | 173 | 70 | 218 | 220 |
| Base content per 1 kb (bases) | 357 | 643 | 254 | 103 | 320 | 323 |
| Base content (%) | 35.7% | 64.3% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 63 | 141 | 51 | 12 | 63 | 78 |
| Base content per 1 kb (bases) | 309 | 691 | 250 | 59 | 309 | 382 |
| Base content (%) | 30.9% | 69.1% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 587 | 958 | 331 | 256 | 514 | 444 |
| Base content per 1 kb (bases) | 380 | 620 | 214 | 166 | 333 | 287 |
| Base content (%) | 38.0% | 62.0% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 242 | 442 | 144 | 98 | 215 | 227 |
| Base content per 1 kb (bases) | 354 | 646 | 211 | 143 | 314 | 332 |
| Base content (%) | 35.4% | 64.6% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 310 | 474 | 194 | 116 | 258 | 216 |
| Base content per 1 kb (bases) | 395 | 605 | 247 | 148 | 329 | 276 |
| Base content (%) | 39.5% | 60.5% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 417 | 724 | 272 | 145 | 382 | 342 |
| Base content per 1 kb (bases) | 365 | 635 | 238 | 127 | 335 | 300 |
| Base content (%) | 36.5% | 63.5% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 345 | 610 | 243 | 102 | 315 | 295 |
| Base content per 1 kb (bases) | 361 | 639 | 254 | 107 | 330 | 309 |
| Base content (%) | 36.1% | 63.9% | ||||
| ND2 (size: 1033 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 375 | 658 | 293 | 82 | 316 | 342 |
| Base content per 1 kb (bases) | 363 | 637 | 284 | 79 | 306 | 331 |
| Base content (%) | 36.3% | 63.7% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 122 | 226 | 82 | 40 | 121 | 105 |
| Base content per 1 kb (bases) | 351 | 649 | 236 | 115 | 348 | 302 |
| Base content (%) | 35.1% | 64.9% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 457 | 921 | 315 | 142 | 452 | 469 |
| Base content per 1 kb (bases) | 332 | 668 | 229 | 103 | 328 | 340 |
| Base content (%) | 33.2% | 66.8% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 99 | 198 | 67 | 32 | 104 | 94 |
| Base content per 1 kb (bases) | 333 | 667 | 226 | 108 | 350 | 316 |
| Base content (%) | 33.3% | 66.7% | ||||
| ND5 (size: 1821 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 647 | 1174 | 456 | 191 | 580 | 594 |
| Base content per 1 kb (bases) | 355 | 645 | 250 | 105 | 319 | 326 |
| Base content (%) | 35.5% | 64.5% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 183 | 342 | 140 | 43 | 136 | 206 |
| Base content per 1 kb (bases) | 349 | 651 | 267 | 82 | 259 | 392 |
| Base content (%) | 34.9% | 65.1% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MNENLFASFITPTMMGLPVVIIIIMLPSMMLTSSNRLLSNRFHTFQQWVVKMITKQMMSIHSPKGQTWCLMLVSLIIFIGSTNLLGLLPH View full | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%) 
Alanine (Ala, A)
n = 13 (5.75%) 
Serine (Ser, S)
n = 15 (6.64%) 
Threonine (Thr, T)
n = 24 (10.62%) 
Cysteine (Cys, C)
n = 1 (0.44%) 
Valine (Val, V)
n = 12 (5.31%) 
Leucine (Leu, L)
n = 38 (16.81%) 
Isoleucine (Ile, I)
n = 26 (11.5%) 
Methionine (Met, M)
n = 17 (7.52%) 
Proline (Pro, P)
n = 14 (6.19%) 
Phenylalanine (Phe, F)
n = 13 (5.75%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 8 (3.54%) 
Glutamine (Gln, Q)
n = 8 (3.54%) 
Histidine (His, H)
n = 8 (3.54%) 
Lysine (Lys, K)
n = 5 (2.21%) 
Arginine (Arg, R)
n = 4 (1.77%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 5 | 16 | 5 | 7 | 18 | 0 | 8 | 7 | 1 | 7 | 0 | 4 | 1 | 7 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 1 | 2 | 5 | 6 | 0 | 1 | 2 | 7 | 1 | 6 | 2 | 5 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 12 | 0 | 4 | 2 | 3 | 1 | 1 | 4 | 2 | 0 | 0 | 0 | 4 | 4 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 3 | 0 | 1 | 0 | 5 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 40 | 64 | 85 | 38 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 24 | 61 | 36 | 106 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 48 | 99 | 74 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFTTVLTSTITLFILIQLKISLQNFPNKPSNKYLKTLKLSNPWELKWTKIFSPLSLPLQ* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 7 (10.45%)
Threonine (Thr, T)
n = 9 (13.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.49%)
Leucine (Leu, L)
n = 13 (19.4%)
Isoleucine (Ile, I)
n = 5 (7.46%)
Methionine (Met, M)
n = 1 (1.49%)
Proline (Pro, P)
n = 6 (8.96%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 1 (1.49%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 1 (1.49%)
Asparagine (Asn, N)
n = 4 (5.97%)
Glutamine (Gln, Q)
n = 4 (5.97%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 7 (10.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 3 | 0 | 3 | 0 | 7 | 0 | 3 | 2 | 2 | 1 | 0 | 0 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 2 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 4 | 1 | 3 | 0 | 2 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 3 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 0 | 1 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 3 | 20 | 27 | 18 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 4 | 21 | 19 | 24 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 10 | 32 | 21 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MFINRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAP View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 31 (6.03%)
Threonine (Thr, T)
n = 36 (7.0%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 40 (7.78%)
Leucine (Leu, L)
n = 58 (11.28%)
Isoleucine (Ile, I)
n = 37 (7.2%)
Methionine (Met, M)
n = 32 (6.23%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 43 (8.37%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 17 (3.31%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 16 (3.11%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 14 | 28 | 13 | 2 | 21 | 2 | 19 | 5 | 1 | 13 | 5 | 19 | 3 | 24 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 0 | 17 | 10 | 14 | 1 | 9 | 6 | 24 | 7 | 10 | 7 | 10 | 1 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 19 | 2 | 6 | 4 | 18 | 0 | 1 | 2 | 12 | 7 | 1 | 1 | 7 | 9 | 12 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 7 | 2 | 12 | 5 | 8 | 2 | 1 | 2 | 5 | 0 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 154 | 98 | 134 | 129 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 134 | 96 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 27 | 99 | 214 | 175 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MAYPSQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYVITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEI View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 8 (3.52%)
Serine (Ser, S)
n = 19 (8.37%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 16 (7.05%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 18 (7.93%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 6 (2.64%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 8 (3.52%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 6 | 12 | 7 | 1 | 10 | 1 | 13 | 4 | 2 | 5 | 5 | 5 | 1 | 4 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 1 | 3 | 2 | 3 | 0 | 1 | 1 | 4 | 2 | 6 | 2 | 4 | 2 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 10 | 1 | 5 | 2 | 8 | 0 | 3 | 1 | 7 | 3 | 0 | 1 | 4 | 4 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 12 | 2 | 5 | 6 | 4 | 1 | 0 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 57 | 51 | 66 | 54 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 54 | 61 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 39 | 100 | 74 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHYNTLTLLYLGLLTNMLTMYQWWRDIVREGTYQGHHTPIVQKGLRYGMILFIVSE View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (8.46%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 19 (7.31%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 36 (13.85%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 19 (7.31%)
Tyrosine (Tyr, Y)
n = 14 (5.38%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 5 | 8 | 16 | 6 | 5 | 0 | 9 | 7 | 0 | 4 | 5 | 6 | 1 | 11 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 5 | 3 | 6 | 1 | 5 | 9 | 7 | 1 | 2 | 3 | 5 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 12 | 0 | 6 | 2 | 7 | 1 | 0 | 3 | 9 | 5 | 1 | 0 | 5 | 3 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 6 | 1 | 3 | 1 | 4 | 0 | 2 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 65 | 60 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 62 | 60 | 95 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 67 | 96 | 90 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MTNIRKKHPLMKIINHSFIDLPTPSNISSWWNFGSLIGLCLIIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYLHANGASMF View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 28 (7.39%)
Serine (Ser, S)
n = 22 (5.8%)
Threonine (Thr, T)
n = 26 (6.86%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 22 (5.8%)
Leucine (Leu, L)
n = 54 (14.25%)
Isoleucine (Ile, I)
n = 44 (11.61%)
Methionine (Met, M)
n = 12 (3.17%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 28 (7.39%)
Tyrosine (Tyr, Y)
n = 16 (4.22%)
Tryptophan (Trp, W)
n = 11 (2.9%)
Aspartic acid (Asp, D)
n = 12 (3.17%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 15 (3.96%)
Glutamine (Gln, Q)
n = 5 (1.32%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 27 | 17 | 11 | 12 | 5 | 26 | 0 | 9 | 5 | 0 | 7 | 5 | 10 | 0 | 12 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 12 | 5 | 11 | 0 | 4 | 9 | 10 | 1 | 6 | 2 | 13 | 0 | 13 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 13 | 0 | 3 | 2 | 15 | 0 | 0 | 2 | 11 | 5 | 0 | 2 | 8 | 7 | 9 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 6 | 0 | 7 | 5 | 10 | 0 | 0 | 1 | 6 | 1 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 92 | 90 | 109 | 89 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 48 | 95 | 77 | 160 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 87 | 156 | 132 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: VHLINILMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTSLFIIAPTLSLMLAFSLWIPLP View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 24 (7.57%)
Serine (Ser, S)
n = 26 (8.2%)
Threonine (Thr, T)
n = 21 (6.62%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 10 (3.15%)
Leucine (Leu, L)
n = 55 (17.35%)
Isoleucine (Ile, I)
n = 32 (10.09%)
Methionine (Met, M)
n = 21 (6.62%)
Proline (Pro, P)
n = 21 (6.62%)
Phenylalanine (Phe, F)
n = 21 (6.62%)
Tyrosine (Tyr, Y)
n = 12 (3.79%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 4 (1.26%)
Glutamic acid (Glu, E)
n = 10 (3.15%)
Asparagine (Asn, N)
n = 11 (3.47%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 7 (2.21%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 16 | 21 | 8 | 4 | 23 | 1 | 18 | 6 | 0 | 3 | 1 | 5 | 1 | 15 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 0 | 6 | 8 | 10 | 0 | 1 | 6 | 4 | 1 | 7 | 6 | 8 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 10 | 0 | 5 | 7 | 10 | 0 | 1 | 3 | 8 | 4 | 1 | 1 | 8 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 7 | 3 | 2 | 2 | 7 | 0 | 2 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 60 | 78 | 96 | 84 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 88 | 57 | 139 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 77 | 142 | 91 | ||||||||||||
| ND2 (size: 1033 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: INPITLLIIYFTILSGPMVTMLSNNFFLMWIGLEMNLLAIIPVMTNKSNPRTTEAATKYFITQATASMIFLLSIIMNYKQLGTWTIQPQT View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.79%)
Alanine (Ala, A)
n = 18 (5.25%)
Serine (Ser, S)
n = 33 (9.62%)
Threonine (Thr, T)
n = 33 (9.62%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 7 (2.04%)
Leucine (Leu, L)
n = 62 (18.08%)
Isoleucine (Ile, I)
n = 40 (11.66%)
Methionine (Met, M)
n = 21 (6.12%)
Proline (Pro, P)
n = 23 (6.71%)
Phenylalanine (Phe, F)
n = 16 (4.66%)
Tyrosine (Tyr, Y)
n = 10 (2.92%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 5 (1.46%)
Asparagine (Asn, N)
n = 20 (5.83%)
Glutamine (Gln, Q)
n = 11 (3.21%)
Histidine (His, H)
n = 6 (1.75%)
Lysine (Lys, K)
n = 14 (4.08%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 16 | 19 | 13 | 9 | 29 | 1 | 9 | 10 | 1 | 1 | 3 | 3 | 0 | 8 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 8 | 5 | 5 | 0 | 2 | 5 | 5 | 1 | 8 | 7 | 8 | 0 | 13 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 14 | 1 | 6 | 8 | 13 | 1 | 1 | 4 | 6 | 4 | 0 | 1 | 5 | 15 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 0 | 0 | 13 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 43 | 95 | 133 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 102 | 66 | 146 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 96 | 143 | 96 | ||||||||||||
| ND3 (size: 1033 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: INPITLLIIYFTILSGPMVTMLSNNFFLMWIGLEMNLLAIIPVMTNKSNPRTTEAATKYFITQATASMIFLLSIIMNYKQLGTWTIQPQT View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.79%)
Alanine (Ala, A)
n = 18 (5.25%)
Serine (Ser, S)
n = 33 (9.62%)
Threonine (Thr, T)
n = 33 (9.62%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 7 (2.04%)
Leucine (Leu, L)
n = 62 (18.08%)
Isoleucine (Ile, I)
n = 40 (11.66%)
Methionine (Met, M)
n = 21 (6.12%)
Proline (Pro, P)
n = 23 (6.71%)
Phenylalanine (Phe, F)
n = 16 (4.66%)
Tyrosine (Tyr, Y)
n = 10 (2.92%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 5 (1.46%)
Asparagine (Asn, N)
n = 20 (5.83%)
Glutamine (Gln, Q)
n = 11 (3.21%)
Histidine (His, H)
n = 6 (1.75%)
Lysine (Lys, K)
n = 14 (4.08%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 16 | 19 | 13 | 9 | 29 | 1 | 9 | 10 | 1 | 1 | 3 | 3 | 0 | 8 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 8 | 5 | 5 | 0 | 2 | 5 | 5 | 1 | 8 | 7 | 8 | 0 | 13 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 14 | 1 | 6 | 8 | 13 | 1 | 1 | 4 | 6 | 4 | 0 | 1 | 5 | 15 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 0 | 0 | 13 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 43 | 95 | 133 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 102 | 66 | 146 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 96 | 143 | 96 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MLKIIVPSLMLLPLTWFSSSKKVWINVTAYSFLINIIAMTTLWQNSDGTLNFSSMFSMDSLSSPLTALTIWLLPLMLLASQKHIKKETVL View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (4.15%)
Alanine (Ala, A)
n = 30 (6.55%)
Serine (Ser, S)
n = 42 (9.17%)
Threonine (Thr, T)
n = 38 (8.3%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 11 (2.4%)
Leucine (Leu, L)
n = 91 (19.87%)
Isoleucine (Ile, I)
n = 52 (11.35%)
Methionine (Met, M)
n = 33 (7.21%)
Proline (Pro, P)
n = 19 (4.15%)
Phenylalanine (Phe, F)
n = 17 (3.71%)
Tyrosine (Tyr, Y)
n = 14 (3.06%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 21 (4.59%)
Glutamine (Gln, Q)
n = 10 (2.18%)
Histidine (His, H)
n = 9 (1.97%)
Lysine (Lys, K)
n = 15 (3.28%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 33 | 19 | 29 | 20 | 5 | 36 | 3 | 25 | 10 | 0 | 2 | 0 | 8 | 1 | 11 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 2 | 12 | 5 | 13 | 0 | 6 | 1 | 12 | 0 | 10 | 6 | 3 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 24 | 0 | 6 | 9 | 17 | 0 | 8 | 2 | 7 | 7 | 1 | 2 | 8 | 13 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 7 | 2 | 3 | 2 | 13 | 2 | 0 | 0 | 9 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 111 | 169 | 105 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 119 | 83 | 204 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 85 | 217 | 142 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MTTTLFNITLAFVFSLIGTLMFRSHLMSTLLCLEGMMLTLFIMLTITSLNIHSMITYPIPIVILVFAACEAAVGLALLVKVSSTYGMDYV View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 7 (7.14%)
Threonine (Thr, T)
n = 11 (11.22%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 7 (7.14%)
Leucine (Leu, L)
n = 19 (19.39%)
Isoleucine (Ile, I)
n = 9 (9.18%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 4 (4.08%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 5 | 6 | 3 | 3 | 6 | 0 | 7 | 2 | 0 | 3 | 0 | 4 | 0 | 5 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 3 | 0 | 1 | 4 | 1 | 0 | 0 | 4 | 0 | 2 | 0 | 0 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 5 | 0 | 2 | 1 | 4 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 2 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 20 | 19 | 33 | 27 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 26 | 16 | 49 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 22 | 45 | 28 | ||||||||||||
| ND5 (size: 1821 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: INPITSVIILIFVALMLPIMLSSTNIYKTYSFSNHATSMIKYSFMLSLIPLCTLFYSNTELLITSWHWVTINTIKLSINLKFDFFCIIFL View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (4.29%)
Alanine (Ala, A)
n = 38 (6.27%)
Serine (Ser, S)
n = 54 (8.91%)
Threonine (Thr, T)
n = 54 (8.91%)
Cysteine (Cys, C)
n = 8 (1.32%)
Valine (Val, V)
n = 16 (2.64%)
Leucine (Leu, L)
n = 97 (16.01%)
Isoleucine (Ile, I)
n = 63 (10.4%)
Methionine (Met, M)
n = 37 (6.11%)
Proline (Pro, P)
n = 24 (3.96%)
Phenylalanine (Phe, F)
n = 43 (7.1%)
Tyrosine (Tyr, Y)
n = 19 (3.14%)
Tryptophan (Trp, W)
n = 13 (2.15%)
Aspartic acid (Asp, D)
n = 9 (1.49%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 40 (6.6%)
Glutamine (Gln, Q)
n = 12 (1.98%)
Histidine (His, H)
n = 11 (1.82%)
Lysine (Lys, K)
n = 22 (3.63%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 36 | 27 | 32 | 20 | 8 | 42 | 4 | 23 | 11 | 1 | 3 | 3 | 7 | 3 | 23 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 5 | 3 | 16 | 12 | 10 | 0 | 5 | 7 | 11 | 3 | 4 | 10 | 9 | 1 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 29 | 1 | 11 | 10 | 20 | 1 | 4 | 8 | 11 | 8 | 1 | 0 | 16 | 24 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 10 | 1 | 3 | 6 | 20 | 2 | 1 | 4 | 4 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 100 | 130 | 228 | 149 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 68 | 158 | 125 | 256 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 168 | 241 | 175 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MMESILILSSFIALGCLGTSLKPSPIYGGMCLIISGCAGCLAVMGLGGSFLGLMVFLIYLGGMMVVFGYTTAMSAEEYPETWVSSWLMFG View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (15.52%)
Alanine (Ala, A)
n = 9 (5.17%)
Serine (Ser, S)
n = 15 (8.62%)
Threonine (Thr, T)
n = 8 (4.6%)
Cysteine (Cys, C)
n = 5 (2.87%)
Valine (Val, V)
n = 16 (9.2%)
Leucine (Leu, L)
n = 21 (12.07%)
Isoleucine (Ile, I)
n = 13 (7.47%)
Methionine (Met, M)
n = 16 (9.2%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 10 (5.75%)
Tyrosine (Tyr, Y)
n = 8 (4.6%)
Tryptophan (Trp, W)
n = 5 (2.87%)
Aspartic acid (Asp, D)
n = 3 (1.72%)
Glutamic acid (Glu, E)
n = 9 (5.17%)
Asparagine (Asn, N)
n = 4 (2.3%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.57%)
Arginine (Arg, R)
n = 1 (0.57%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 1 | 10 | 1 | 1 | 0 | 0 | 15 | 0 | 0 | 3 | 1 | 11 | 1 | 10 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 4 | 1 | 5 | 0 | 3 | 1 | 8 | 1 | 8 | 10 | 3 | 0 | 0 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 3 | 1 | 4 | 0 | 4 | 1 | 6 | 0 | 6 | 2 | 2 | 4 | 3 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 4 | 5 | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 6 | 48 | 57 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 29 | 26 | 76 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 32 | 8 | 62 | 73 | ||||||||||||
| Total protein-coding genes (size: 11396 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: VHLINILMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTSLFIIAPTLSLMLAFSLWIPLP View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 215 (5.66%)
Alanine (Ala, A)
n = 241 (6.35%)
Serine (Ser, S)
n = 299 (7.88%)
Threonine (Thr, T)
n = 304 (8.01%)
Cysteine (Cys, C)
n = 32 (0.84%)
Valine (Val, V)
n = 178 (4.69%)
Leucine (Leu, L)
n = 601 (15.83%)
Isoleucine (Ile, I)
n = 363 (9.56%)
Methionine (Met, M)
n = 228 (6.01%)
Proline (Pro, P)
n = 191 (5.03%)
Phenylalanine (Phe, F)
n = 234 (6.16%)
Tyrosine (Tyr, Y)
n = 131 (3.45%)
Tryptophan (Trp, W)
n = 102 (2.69%)
Aspartic acid (Asp, D)
n = 70 (1.84%)
Glutamic acid (Glu, E)
n = 92 (2.42%)
Asparagine (Asn, N)
n = 163 (4.29%)
Glutamine (Gln, Q)
n = 80 (2.11%)
Histidine (His, H)
n = 96 (2.53%)
Lysine (Lys, K)
n = 106 (2.79%)
Arginine (Arg, R)
n = 63 (1.66%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 226 | 137 | 198 | 127 | 56 | 230 | 12 | 164 | 72 | 8 | 54 | 28 | 84 | 12 | 139 | 95 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 30 | 16 | 16 | 89 | 59 | 88 | 5 | 43 | 49 | 96 | 27 | 68 | 51 | 67 | 5 | 97 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 41 | 159 | 7 | 65 | 47 | 124 | 6 | 27 | 30 | 86 | 45 | 9 | 12 | 72 | 91 | 53 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 43 | 75 | 17 | 40 | 30 | 97 | 9 | 8 | 13 | 41 | 1 | 0 | 0 | 7 | 1 | 93 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 796 | 855 | 1221 | 925 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 469 | 978 | 746 | 1604 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 161 | 831 | 1595 | 1210 | ||||||||||||
>NC_013276.1 Mesocricetus auratus mitochondrion, complete genome GTTGATGTAGCTTAATACAAAGCAAAGCACTGAAAATGCTTAGATGGATTTTTTTCAATCCCATAAACAT AAAAGGTTTGGTCCTAGCCTTATAGTTAGTTAGAGGTAGAGTTACACATGCAAATCTCTATAAACCAGTG TCAAATCCCTAGGTTTTACTTTAAACCCTAAGGAGAGGGTATCAAGCACATACACATATATAGCTAAAGA CACCTTGCCTAGCCACACCCCCACGGGACTCAGCAGTGATAAAAATTAAGCCATAAACGAAAGTTTGACT TAGTCATACCTCATCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAAC TATTCTCCGGCGTAAAATGTGTTTTTATTACGAACATAATAGAATTAAAACCCAACTAATATGTGAAAAT TCATTGTTGGACTTAAAATCAATAACGAAAGTAATTCTAATTATATTAATACACGATAGCTAAGATCCAA ACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTAAGTGATTAAATAACAAAATCACTTGCCTGA GAACTACTGGCCACAGCTTAAAACTCAAAGGACTTGGCGGTACTTTATATCCATCTAGAGGAGCCTGTTC TATAATCGATAAACCCCGTTATACCTTACCACCCCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCA AACCTTAAAAAAGAACAAGAGTAAGCAAGAGAATACCCATAAAAACGTTAGGTCAAGGTGTAGCCTATGG GCTGGGAAGTAATGGGCTACATTTTCTTCTAAAGAACAGTTACGCTATCCTCTATGAAACTTAGAGGACA AAGGAGGATTTAGTAGTAAATTAAGAATAGAGAGCTTAATTGAATAGAGCAATGAAGTACGTACACACCG CCCGTCACCCTCCTCAAATTAAGCTAACTGTTAACTATACCTAATATTGACTCATAAACTTATGAGAGGA GATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGACTAACCATAAGGTAGCTTAAACCCCAT AAAGCATCTGGTCTACACCCAGAAGATTCCACATCCAATGGACATTATGAACTAACTCTAGCCCTCATTT TTTCAATCTATAAAATTTTAACTTACAAATTAAAACATTCACTAAAAGAAGTATTGGAGAAAGAAACTTT TTAAGGAGCCATAGAGATAGTACCGTAAGGGAAAGATGAAAGACTTGTTAAAAGTAAATAAAAGCAAAGA TTAAACCTTGTACCTTTTGCATAATGAACTAACTAGAAATCTTCTAACTAAGAGAACTTTAGCTAGAGAC CCCGAAACCAAGCGAGCTACCCAAGAGCAACTTTAAGAGTTAACCCGTCTATGTAGCAAAATAGTGGGAA GACTTCTGGGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTACCCAATAAAGAATTTTAGTT CAACTTTAAGCCTACCATAAACTTTACTAACACAAATGTAAGCTTAAAATATAGCCTAAAGAGGGACAGC TCTTTAGGAACGGAAACAACCTCTAATAGTGAATAAGACAATCAATCAACTAACCATAGTTGGCTTAAGA GCAGCCATCAATAAAGAAAGCGTTCAAGCTCAACACTTAATAGTACATAATACCCTAAATAAAATCTATT TCCTATCTTCATAACTGGGTTAATCTATTAGCTAATAGAAGCAATACTGTTAGCATGAGTAACAAGAATA TTATTCTCCACGCACAAGCCTATAACAACCCGGATAACCATTGTTAGTTAACAAATTATAAGTACATCAC CCACTTATAAAAAGTACTTATTATCCAATGTTAGTCCAACACAGGTGTGCTAAAAGGAAAGATTAAAAGA AATAAAAGGAACTCGGCAAACATGAATCCCGCCTGTTTACCAAAAACATAACCTCTAGCATTATAAGTAT TAGAGGCAATGCCTGCCCAGTGACTAAGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAAT CACTTGTTCCTTAATTAGGGACTAGTATGAAAGGCTAAACGAGGGTTCAACTGTCTCTTATTTCCAATCA GTGAAATTGACCTTCCCGTGAAGAGGCGGGGATATAATAATAAGACGAGAAGACCCTATGGAGCTTTAAT CTCACAACTTAATTTTAATAACAAACAGTCTACTGACTTTAAAAAACTAAATATAAGTTGTAGATTTCGG TTGGGGTGACCTCGGAGAATAAAAAAACCTCCGAATGATTATAACCTAGGCTTACAAGCCAAAGTACAAA ATATAATCTTATTGACCCAAACTAATTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATCCT ATTCAAGAGTCCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGTAG CAGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCA GGTCGGTTTCTATCTATTTACGATTTCTCCCAGTACGAAAGGACAAGAGAAATGGGACCTCCTTAATACA AGTGCCCCTGATTAATTAATGAAACCATCTCAATATAGTAAACACGTACTATACCCACCCTAGACAAGGG TTTATTAGGGTGGCAGAGCCCGGAAATTGCGTAAGACTTAAAACCTTGTTTTCAGAGGTTCAAATCCTCT CCCTAATAGTGCATCTAATTAACATTCTAATACTACTTATCCCAATTCTAATCGCAATAGCCTTTCTTAC CCTAGTAGAACGAAAAATCTTAGGATATATACAACTACGAAAAGGCCCTAACATCGTTGGCCCATATGGC ATCCTCCAACCATTTGCCGACGCTATAAAACTATTTATTAAAGAACCTTTACGTCCTTTAGCCACCTCAA CATCCCTATTTATTATTGCCCCCACACTATCACTTATACTTGCATTTAGCCTATGAATTCCTCTACCCAT ACCTCACCCTTTAATTAATATAAATATAGGCATATTATTTATCTTAGCTATCTCCAGCCTATCCGTATAT TCTATCTTATGGTCAGGCTGAGCCTCTAATTCAAAATATTCTATATTTGGAGCCTTACGTGCAATCGCAC AAACAATCTCCTACGAAGTAACTATAGCAATCATCTTACTATCAGTCCTTCTAATAAATGGCTCATTTTC CTTACAATTCCTTATTACTACACAAGAGCACACATGACTCTTACTTATATCCTGACCCTTAGCTATAATA TGATTTATCTCAACCCTAGCAGAAACCAATCGAGCACCCTTTGATTTAACCGAAGGTGAATCTGAACTAG TTTCAGGGTTTAATGTAGAGTATGCCGCAGGACCATTCGCCCTATTCTTTATAGCTGAGTACACTAATAT TATTCTAATAAATGCTCTATCAACAATTGTATTCTTAGGACCAATCCATAGCCTATATCTACCACATGTT TATACAACCGACTTTATAATCAAAACATTGATACTAACTTCCTTATTTTTATGAATTCGAGCATCTTACC CACGATTTCGCTATGATCAACTTATACACCTCCTCTGAAAAAACTTCTTACCCCTGACACTAGCTTTATG TACATGACACATTTCAATTCCTATCTTCATAGCAAGTATTCCACCCTACACTTAGAAATATGTCTGACAA AAGAGTTACTTTGATAGAGTAAATTATAGAGGTTCAAATCCTCTTATTTCTAGGACAGTAGGAATTGAAC CCACCTCTTAGAATTCAAAATTCTATGTAATACCAATATACTTCATCCTAAAAGTAAGGTCAGCTAATCA AGCTATCGGGCCCATACCCCGAAAATGTTGGTTTAAACCCTTCCCGTACTAATTAACCCTATTACCCTCT TAATTATTTACTTTACTATTCTCTCAGGCCCAATAGTCACAATACTCAGCAACAACTTCTTTCTTATATG AATTGGTCTAGAAATAAACCTTCTAGCCATTATTCCAGTTATAACTAACAAGTCAAACCCACGAACTACA GAAGCAGCTACAAAATATTTCATCACCCAGGCTACAGCTTCCATAATTTTCCTTCTTTCTATTATCATAA ACTATAAACAATTAGGAACATGAACAATTCAACCTCAAACTAGTAGCCTCACATCTACACTAATCTTTAT CTCCTTAGCAATCAAATTAGGTCTATCACCCTTCCACGCTTGACTACCAGAAGTAACTCAAGGCATTCCT CTAAGCACAGGACTCCTGCTACTAACTTGACAAAAACTAGCTCCTCTATCTATCTTATTTCAAGTCTACG AACTAATTAACCCACATGTACTAATCATGTCAGCTTGCGCCTCAGTAATAATTGGAGCATGAGGAGGCCT CAATCAAACTCAAACTCGAAAAATCATAGCTTATTCCTCCATCGCCCACATAGGCTGAATAATCTCGATT CTACCCTATAATCCATCCCTTACCATTATTAACCTTATCATTTATATTCTACTAACACTAGCCATATTCT CAATTCTTCACCCCCACTCATTTTTCTCTATCAAATCAACATCACTTCTATGAAATAAATCACCTATTAT ACTTCCCTTAATGTCCTCTATCCTCTTATCCATAGGAGGGTTGCCCCCTCTTACCGGCTTTCTACCTAAA TGACTTATCATTACAGAACTCCTAAAAAACAACAACCAACTACTAGCTTCAATCATAGCAATTCTAGCCC TAGTCAATCTATTCTTTTATACTCGCTTAATTTACTCAACTTCACTTACTACATTCCCTTCCACTAATAA CTCTAAAATATTTAACCACCAAAAAAACATAAAAAAATACCCAACCCTACCACTAACTGCAATCACAAGC ACGCTAATACTCCCCCTTCTACCCCTAATATTATAGAAGTTTAGGATAAATAAGTCCGATGGCCTTCAAA GCCCTTAGTAAACCCTTAGTTTAACTTCTGCATAGAGATTGTAAGACTATACCTTACATCTAATGAATGC AAATCAATTGCTTTTATTAAGCTAAATCCCCCTAGATTGGCAGGATTCAAACCTACAAAATTTTAGTTAA CAGCTAAACACCCAACTACTGGCTTCAATCTACTTCTCCCGCCTATCAGAAAGGGGGCGGGAGAAGCCTT AGTAGAAATATTATCTACACCTTCGAACTTGCAATTCGATATGATTATCACCTTAAGGCCTGGTAAAAAG AGGGTTATAACCTCTGTGCTTAGATTTACAGTCTAATGCTATGCTCAGCCATTCTACCTATGTTCATTAA TCGCTGGTTATTTTCAACTAATCATAAAGATATTGGAACACTGTATTTAATATTTGGGGCCTGAGCAGGT ATAGTGGGCACTGCTCTTAGCATCTTAATTCGAGCAGAGCTTGGTCAACCTGGGGCTTTACTAGGTGATG ATCAAATCTATAATGTAGTTGTAACAGCTCATGCATTTGTTATAATCTTCTTTATGGTTATACCAATAAT AATTGGGGGATTTGGAAACTGACTTGTACCACTAATAATTGGAGCCCCTGATATGGCATTCCCTCGAATA AATAACATAAGTTTCTGACTTCTACCCCCCTCATTCCTTCTTTTATTAGCATCATCTATAGTCGAAGCGG GAGCTGGAACTGGTTGAACAGTCTACCCCCCACTAGCAGGAAACTTAGCACATGCTGGAGCATCCGTAGA TCTTACTATCTTTTCACTCCATTTGGCTGGAGTATCTTCAATTTTAGGGGCTATCAATTTTATTACTACA ATTATTAACATAAAACCCCCAGCCATAACACAGTATCAAACCCCCCTATTTGTCTGATCAGTATTAATCA CAGCTGTTTTACTATTATTATCTCTACCTGTCCTAGCTGCTGGAATTACAATGCTACTTACAGATCGTAA TTTAAATACAACTTTCTTCGATCCTGCCGGAGGAGGAGATCCAATTCTATACCAACACCTATTTTGATTC TTTGGTCATCCAGAAGTATACATCTTAATCCTACCGGGCTTCGGAATTATTTCACACATTGTTACTTATT ACTCCGGAAAAAAAGAACCTTTTGGCTATATAGGTATAGTATGAGCAATAATATCAATTGGATTCCTGGG CTTTATTGTTTGAGCTCATCATATATTTACAGTAGGACTTGACGTAGACACACGAGCCTATTTTACATCA GCCACTATAATTATTGCAATCCCAACTGGAGTAAAAGTATTTAGCTGACTAGCAACGCTTCATGGAGGAA ACATCAAGTGATCACCAGCTATACTATGAGCCCTAGGGTTTATCTTCTTATTTACAGTTGGAGGTCTAAC AGGTATTGTCTTATCAAACTCATCCTTAGATATTGTATTACATGATACTTATTACGTAGTTGCCCATTTC CACTACGTTCTATCAATAGGAGCTGTATTTGCTATTATAGCAGGCTTTGTTCACTGATTCCCTCTATTTT CAGGCTATACTCTTGACGATACATGAGCAAAAGCCCATTTCATTATTATATTTGTTGGGGTAAACATAAC ATTCTTCCCTCAACACTTCTTAGGGCTAGCAGGAATACCACGACGCTATTCTGACTACCCAGATGCTTAT ACTATATGAAACACTGTGTCATCAATAGGATCTTTTATCTCACTAACAGCCGTGCTTGTAATAATCTTTA TAATCTGAGAGGCTTTCGCTTCTAAGCGAGAAGTTCTCACAGTAGACTATTCCTCAACGAACCTAGAATG ACTTCACGGTTGTCCTCCCCCCTATCATACATTTGAAGAACCTACTTTCGTTAAAGTAAAATAAATGAGA AAGGAAGGATTCGAACCCCCTAAAATTGGTTTCAAGCCAACTCCATAACCTCTATGTCTCTCTCAATGAG ATATTAGTAAAATCATTACATAACTTTGTCAGAGTTAAATTATAGACTAATCTCTATATATCTTAAATGG CTTATCCTTCTCAATTAGGCTTACAAGACGCCACATCACCTATTATAGAAGAATTAATAAACTTTCATGA TCATACATTAATAATCGTCTTCCTTATTAGTTCTCTGGTCCTATATGTTATTACACTAATATTAACTACT AAGTTAACTCACACAAGTACAATAGATGCACAAGAAGTAGAAACAATCTGAACTATTCTACCTGCAGTAA TTCTTATCCTTATTGCCCTACCGTCTTTACGAATTTTGTATATAATAGATGAGATTAACAACCCAGTATT AACAGTGAAAACTATAGGACATCAGTGATACTGAAGTTATGAGTATACAGACTATGAAGACCTATGCTTT GACTCATATATAATCCCTACGACAGATCTAAAACCAGGAGAACTTCGATTACTAGAAGTTGACAATCGAG TTGTACTCCCCATAGAACTACCGATTCGCATGCTAATCTCATCCGAAGACGTTCTTCACTCATGAGCTGT CCCATCTCTTGGATTAAAAACAGATGCAATTCCCGGACGACTAAATCAAGCTACTATTTCATCAAATCGA CCAGGGTTATTCTACGGTCAGTGTTCAGAAATCTGTGGGTCTAATCATAGCTTTATACCTATTGTTTTAG AATTAGTCCCTCTTAAATACTTTGAAAACTGATCCGTATCAATAGTCTAAATCACTATGAAGCTCAGAGC GTTAACCTTTTAAGTTAAAATTAGAGACTTCTAGTCTCCATGGTGAAATGCCACAACTAGATACATCTAC ATGATTTACTACTGTTCTAACTTCTACAATCACACTATTCATCCTAATTCAGTTAAAAATTTCTTTACAG AACTTTCCCAATAAACCATCAAACAAATATCTTAAAACCCTTAAACTAAGTAACCCTTGAGAACTAAAAT GAACGAAAATCTTTTCGCCTCTTTCATTACCCCTACAATAATAGGTCTACCTGTTGTAATTATTATTATT ATACTCCCATCCATAATACTAACATCTTCTAACCGTCTCTTAAGCAACCGCTTCCATACATTTCAACAAT GAGTAGTTAAAATAATTACCAAACAAATAATATCAATTCATTCGCCAAAAGGACAGACTTGATGCCTAAT ACTAGTTTCCCTAATTATCTTTATTGGCTCAACAAACCTCTTAGGCTTATTACCTCATACCTTCACCCCA ACAACCCAACTATCAATAAATCTAGGAATAGCAATTCCACTATGAGCAGGAACAGTTTTCCTCGGATTTC GCCACAAAATAAAAAGCACATTAGCCCATTTCCTACCGCAAGGAACACCTATTCCTCTTATTCCTATACT CATTATTATTGAAACAATCAGCCTATTTATTCAACCCATAGCCCTTGCAGTTCGACTAACAGCCAATATT ACTGCAGGACATTTACTCATACATCTTATCGGAGGGGCAACCCTAGTTTTAACCTCTATCAGTCCCCCAA CAGCTATAATTACATTTATCATTCTTGTACTCCTAACTATTCTAGAATTTGCTGTTGCCCTAATTCAAGC ATATGTGTTTACTCTACTAGTAAGCTTATATCTACATGATAATACTTAATGACCCACCAAACTCATGCCT ATCACATAGTTAACCCAAGCCCATGGCCCCTCACAGGAGCACTCTCTGCCCTCCTTCTTACCTCAGGATT AGCAATATGATTCCATTATAACACTCTTACACTTCTTTATCTAGGCCTCTTAACTAATATACTAACAATA TACCAATGATGACGAGATATCGTTCGTGAAGGTACCTACCAAGGCCACCATACACCCATCGTCCAAAAAG GCCTTCGATATGGCATAATTCTCTTTATTGTCTCAGAAGTCTTCTTTTTCGCTGGTTTCTTCTGAGCCTT TTATCACTCTAGCTTAGTTCCTACCCACGACCTAGGAGGCTGCTGACCACCTACAGGAATTATTCCACTT AATCCACTTGAAGTACCCTTACTTAACACATCTGTACTTTTAGCATCTGGTGTCTCAATTACATGAGCTC ATCATAGCCTTATAGAAGGTAAACGAAATAATATAAATCAAGCTTTACTTATTACTATTGGCTTAGGAGT ATATTTTACAGCTCTTCAAGCGTCAGAATACTTAGAGACTTCCTTTTCTATTTCAGATGGTATCTATGGA TCAACATTTTTTATAGCAACAGGCTTTCATGGCCTTCATGTAATTATCGGATCCACATTCCTTATGGTGT GCCTTTTACGTCAACTAAAATATCACTTTACATCAAAACACCATTTCGGCTTTGAAGCAGCAGCTTGATA CTGACACTTTGTAGATGTCGTATGACTATTCCTCTACGTTTCTATCTATTGATGAGGGTCGTACTTTCTT AGTATATTTAGTACAGTTGACTTCCAATCAACTAGGTCCAACTATAATTTGGAAGAAAGTAATTAACTTA ATCCTAGCAGTTTCAATCAACATAATACTCTCATTAATTTTAATTCTAGTTGCCTTCTGGCTTCCCCAAC TTAATGTATATGCAGAAAAAGCAAGTCCCTATGAATGTGGTTTTGACCCCATAAGCTCAGCTCGACTCCC TTTCTCTATAAAATTTTTTCTTGTAGCTATTACATTTCTTTTATTTGACTTAGAAATTGCTCTCCTCCTC CCCCTACCTTGAGCCATACAATCTACAAACCTTAAAACAACTCTAATTATCTCTACAATATTTCTATCTA TTCTAGCGCTAGGCTTAGCCTATGAATGAAAACAAAAAGGCCTTGAATGGACTGAATAGTTGGTGATTAG TTTAACTAAAATTAATGATTTCGACTCATTAGATTATGACATATCTCATAATCACCAACATGACAACTAC TCTATTTAATATTACATTAGCATTCGTATTTTCATTAATTGGAACTCTTATGTTTCGCTCACACCTCATA TCTACACTTCTATGCCTAGAGGGAATAATATTAACCTTATTTATTATACTCACTATCACCTCATTAAACA TCCACTCAATAATCACATATCCTATCCCTATTGTTATCCTAGTATTTGCGGCATGCGAAGCAGCAGTTGG ACTCGCCCTATTAGTTAAAGTATCCTCTACATATGGAATAGACTATGTACAAAATCTTAACTTACTACAA TGCTAAAAATTATTGTACCTTCATTAATATTACTACCATTGACATGATTTTCTAGTAGTAAAAAAGTGTG AATCAACGTAACAGCCTATAGTTTTTTAATTAATATCATTGCTATAACAACATTATGACAAAACAGCGAC GGAACTTTAAACTTCTCCTCCATATTTTCTATAGACTCCCTATCCTCACCTCTTACAGCCCTTACTATTT GACTTCTACCATTAATACTCCTAGCTAGTCAAAAACATATTAAAAAAGAAACCGTACTTAATAAAAAGCT TTATATCTCCATACTTGTAACCTTACAAATTCTTCTAATTATGACATTTTCTGCTAATGAATTAATCATA TTTTATATCCTTTTTGAAGCTACTTTAATCCCAACATTAATTATTATTACCCGATGAGGAAATCAAACAG AACGATTAAACGCAGGATTGTACTTCTTATTTTACACATTAATTGGTTCCATTCCCCTTCTCATCGCTCT TATTTCAATTCAAAAATCCCTAGGAACATTAAATATTCTACTTTTATCACTAAACACTTCAACACTAGAT AACAACTGGTCTAATTACATCCTATGATTAGCATGTATAATAGCTTTTATAATTAAAATGCCTCTATATG GAGTTCACTTATGACTACCCAAAGCTCATGTAGAAGCTCCTATTGCAGGATCAATAATTCTAGCTGCAAT TTTACTGAAACTAGGTGGTTACGGAATAATACGAGTATCAATTATCCTTGATCCTATAACAGAGACTATA GCATATCCCTTCATTCTTTTATCACTATGAGGTATACTTATAACAAGTTCTATCTGCCTACGACAAACAG ATCTAAAGTCATTAATCGCTTACTCTTCAGTAAGTCATATAGCACTAGTTATTGCAGCTATTATAATTCA AACTCCCTGAAGTTTTATAGGAGCCTCAGCATTAATAATCGCACATGGACTCACATCATCACTATTATTC TGCCTAGCAAATACTAACTATGAACGAATCCATAGTCGAACTATAATTATAGCCCGAGGCCTTCAAACAG CATTCCCTCTAATAGCAACTCTATGATTTCTAGGAAGCCTGGCAAACCTAGCCTTACCCCCTTCAATTAA CCTAATTGGAGAACTACTTATTACAATTACACTATTCTCCTGATCACACCTGTCAATCATTCTTGTAGGT ACAAATATCCTAATTACAGCTCTATACTCACTCTATATACTTATCATAACCCAACGAGGAAAACTTACAT TTCATATAAACAACCTCCAACCTTCCTACACACGAGAGTTAACCCTAATAATACTACACATCACACCTCT AATCCTACTTATCATGAACCCTAAACTAATTCTAGGTCCCACATTATGTAGGCATAGTTTACTAAAATAT TAGATTGTGGATCTGAAGATAGGAGATAAAACTCCTTACCTACCGAGAATGTATGCAAGAGCTGCTAACT CCTGCTACCATGTATAATAACATGGCTTTCTTACTTTTATAGGATAGTAGTAATCCGTTGGTCTTAGGAA TCAAAAACTTGGTGCAACTCCAAATGAAAGTAATTAACCCTATCACATCTGTAATCATCCTAATCTTTGT AGCTCTAATACTTCCTATTATATTATCCTCAACTAACATCTATAAAACCTATAGCTTCTCTAATCACGCT ACATCAATAATTAAGTACTCATTTATATTAAGCCTTATTCCACTATGCACTCTATTTTATTCCAATACCG AACTTCTAATTACCAGTTGACACTGAGTAACTATCAATACAATTAAATTATCCATTAACCTTAAATTTGA CTTCTTCTGTATCATTTTCCTATCAGTAGCCCTATTCGTCACCTGATCCATTATAGAATTTTCCTCATGA TATATACATTCCGACCCCAACTTAAATCGATTTATTAAATACCTACTACTATTTCTTATTACCATAATTA TTCTCACTTCAGCTAATAACATGTTCCAACTATTCGTAGGCTGAGAAGGCGTGGGGATTATATCTTTTCT ACTAATCGGCTGATGATACGGACGATCTGATGCTAACACAGCAGCACTACAAGCTATCCTCTATAATCGC ATTGGCGACATCGGCTTTATCGCTACAATAGCTTGACTGAGCCTAAACATAAATTCATGGGAATTTCAAC AAATCTTTATAACAAATAACAACAGCATTATCCCGCTGCTAGGTCTTTTAATTGCAGCCATAGGTAAATC AGCACAATTTGGCCTTCATCCATGACTTCCATCAGCTATAGAAGGCCCCACTCCAGTTTCAGCATTACTC CACTCAAGCACAATAGTGGTGGCAGGAATTTTCCTTTTAATTCGTTTTCATCCACTGATATCTAATAACA ACATGGCCCTAACCATGATACTCTGCCTAGGATCAATTACCACATTATTTACAGCAATCTGTGCTCTAAC TCAAAATGACATTAAGAAAATTGTAGCCTTCTCTACATCAAGCCAGTTAGGACTTATAATAGTTACACTA GGAATCAATCAACCATATTTAGCATTCCTTCACATTTGTACTCACGCTTTCTTTAAAGCCATGCTATTTA TATGCTCTGGATCAATTATCCACAACCTAAATGATGAACAAGACATCCGAAAAATAGGGGGTCTCTTAAA ACCCCTACCATTTACATCCTCTTGTCTTATTATTGGAAGTTTAGCTTTAACAGGAGTTCCATTTCTTACA GGTTTTTATTCAAAAGATCTAATCATTGAAGCCATAAACACGTGTTATACCAACGCCTGAGCCCTTCTAG TCACACTTCTAGCTACCTCTCTAACAGCTGCTTACAGCCTACGAATTATCTTCTTTGCTCTAATATCAAA ACCTCGCTACCTACCCCTAATTACACTAAACGAAAATAACCCCAAACTTATAAACCCCATTAAACGCTTA GCCATAGGAAGTATATTTGCAGGATTTATCATGACATACAACATCCCAACTACATCTATTCAAGTAATAA CTATACCCTGATACTTAAAAACAACAGCAATCTTAGTCACTCTAATAGGATTCACTATCGCTTTAGAACT AAACAACCTAACATATAATCTAAAATCAAATACATCAACACTAACAAACTTATTCTCCACATCACTAGGG TATTTCACCCTTATCTTCCACCGCTTATTACCCAAAAAATTCCTAACTATAAGCTTTAACACACCCCTAA ACATACTAGACTTAACATGACTGGAAACTTCTATCCCCAAAGCCATCTCATATATAAATCTCACAGCCTC CCAAATCCTTGCCAACCAAAAAGGTTTAATTAAACTTTACTTCATATCCTTCCTCATTACTCTCCTTTCG ATTCCTATTTTACTAATTAGTTTCCACGAGTAATCTCAATAATAATAAAAATACCCATAAATAAAGTTCA ACCAGATACTACTATTAATCATGCAGAACAACTGTATAAAGCTGCTACTCCAGCTCCCCCATCTCCTATT AAACCTAACTCATCTCCATCATAAACTACCCAACCACCCATACTATTAAAATTCAAGACTACCTCTACTC CCTCATAGTAATTAGTTACAAATGTTATCCCTAACTCTATAAAGATACTTATTACTAAAACTCCAAATAT TAACCAACTAGATACTCACGTTTCAGGATATTCTTCAGCTGACATAGCAGTTGTATACCCAAATACAACC ATCATTCCACCTAAATAAATTAAAAATACTATTAACCCTAAAAACGACCCCCCAAGACCTATCACCGCTA AGCAACCAGCACACCCACTAATAATCAAACATATCCCCCCATAAATAGGTGAAGGCTTCAAAGATGTGCC TAAACACCCCAATGCAATAAATGAACTTAAAATGAGAATTGATTCTATCATAGTTTCTACACAGATACTA TCTATGACTAATGACATGAAAAATCATCGTTGTAATTCAACTATAGAAACATTAATGACAAACATTCGAA AAAAACATCCTCTAATAAAAATTATTAACCACTCATTCATTGATCTTCCAACTCCATCTAATATCTCATC ATGATGAAACTTTGGATCCTTAATTGGACTTTGCCTAATTATTCAAATCCTTACAGGCCTATTCCTAGCC ATACACTATACATCAGACACTACTACAGCCTTCTCATCAGTAGCACATATTTGTCGAGACGTAAACTATG GTTGACTAATTCGCTATCTTCATGCTAATGGAGCTTCAATATTCTTTATTTGCTTATTTCTTCATGTCGG TCGGGGTATCTACTATGGCTCATATACTATAGTAGAAACTTGAAACGTTGGAATTGTTTTACTATTCGCA GTTATAGCTACAGCATTCGTAGGCTACGTACTACCATGAGGCCAAATATCATTTTGAGGAGCTACAGTCA TCACTAATCTTCTATCAGCTATCCCTTACATCGGCACAACTCTAGTAGAATGAATTTGAGGCGGGTTTTC AGTCGATAAAGCCACACTAACTCGATTCTTTGCATTTCATTTCATTCTCCCATTTATTGTAACAGCACTT GTTCTAGTTCACCTTCTATTCTTACATGAAACAGGATCTAATAACCCATCAGGCCTAAACTCAGATGCAG ATAAAATCCCATTTCACCCTTATTATACAATTAAAGACCTCTTAGGTGTATTCCTACTATTGATTGCCCT CATAACTTTAGTATTGTTTTTCCCAGATGTTCTCGGAGACCCAGATAATTATACTCCTGCAAATCCACTT AATACTCCAGCACATATTAAACCAGAATGATATTTTCTATTCGCATACGCTATCTTACGATCTATCCCCA ATAAACTAGGCGGAGTTCTAGCTCTAATTCTCTCCATCCTAGTCCTAGCTGCTCTACCCCTTCTTCATAC ATCAAAACATCGAGCTATAATCTTCCGACCTATCACACAAACTATATACTGAATTCTAGTCGCAGACTTA CTTTTACTAACTTGAATCGGAGGACAACCTGTAGAATATCCATTTATCATTATTGGCCAACTAGCCTCAA TCGCTTATTTCGCTATTATTATTATCTTCATACCAATTGCAAGCATAATCGAAGATAGCATTCTAAAATT CATTTGTCTTGATAGTATAATAATTACTCTGGTCTTGTAAGCCAGAAATGAAGATTAAATCTTCTCAAGG CATCAAGAAGGAAGGACTATCCCCCACCTTCAGCACCCAAAGCTGAAATTCTAGTTGAACTACTTCTTGT ACATAAATTTATCTAGTCCATAATACATTTATGTATATCGTACATTATATTATTTTCCCCTAGCATATAA GCATGTCCTATTTAATTAATGTCTCTAAGACATATTATGATTAATCAACATTACTTGTACTAAACCATGT CTATTATAGTATTACTATATATGAATGATCTTTAAACATACCTGTGTTATCTTACATACCACATTCAGTC ATAACCCTGCTTGTCCATATGACTATCCCCTTCCCCATGTGGTCTATCTATCTACCATCCTCCGAGAAAC CAGCAACCCGCCCATATCTGCCCCTCTTCTCGCTCCGGGCCCATTTTAACTTGGGGGTGACTATACTGAA ACTTTATCAGGCATCTGGTTCTTACTTCAGGGCCATAGAATGTTTTATCGTCCATACGTTCCCCTTAAAT AAGACATCTCGATGGTTACGGGTCTAATCAGCCCATGCCCAACATAACTGTAATCTCGGGCCTTTGGTAT TTTTTAATTTTCGGTGTGCGTTACTCCACTAGTCGTGAGGTCAGCTTATCTTGTAGCCATACTTTTTCAC TCAAGGGGAAAGCCATTAATCCTCATGGGACTCGTCCAAAGACATATTATGAATGGTTTCTCGGACATAT ACAATTATTTGACTTAATTCCTATATCAAACCCCCCCTTCCCCCAACTTAGCAGCATTCCTTCTGACAAA CCCCAAAAGCAGAGATCCAACTACCAAGGCCCCCTCCCACATTCTAGTAATCCTCCGAACATAACTTAAA ACCCAGTATTCGTACAAAAAAATCCCTTCAAACCGTCGCTTGAATTTGCCTATGTGTGCCAAAAATTATC CAGGTAGTACGAAGTACATATTTA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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