Scientific name | Anguilla australis |
Common name | Shortfin eel |
Maximum lifespan | 32.00 years (Anguilla australis@AnAge) |
Total mtDNA (size: 16686 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 6860 | 9826 | 4306 | 2554 | 4163 | 5663 |
Base content per 1 kb (bases) | 411 | 589 | 258 | 153 | 249 | 339 |
Base content (%) | 41.1% | 58.9% |
Total protein-coding genes (size: 11447 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 4708 | 6739 | 3108 | 1600 | 2962 | 3777 |
Base content per 1 kb (bases) | 411 | 589 | 272 | 140 | 259 | 330 |
Base content (%) | 41.1% | 58.9% |
D-loop (size: 966 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 290 | 676 | 179 | 111 | 296 | 380 |
Base content per 1 kb (bases) | 300 | 700 | 185 | 115 | 306 | 393 |
Base content (%) | 30.0% | 70.0% |
Total tRNA-coding genes (size: 1563 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 679 | 884 | 378 | 301 | 386 | 498 |
Base content per 1 kb (bases) | 434 | 566 | 242 | 193 | 247 | 319 |
Base content (%) | 43.4% | 56.6% |
Total rRNA-coding genes (size: 2656 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 1159 | 1497 | 629 | 530 | 507 | 990 |
Base content per 1 kb (bases) | 436 | 564 | 237 | 200 | 191 | 373 |
Base content (%) | 43.6% | 56.4% |
12S rRNA gene (size: 947 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 442 | 505 | 240 | 202 | 184 | 321 |
Base content per 1 kb (bases) | 467 | 533 | 253 | 213 | 194 | 339 |
Base content (%) | 46.7% | 53.3% |
16S rRNA gene (size: 1709 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 717 | 992 | 389 | 328 | 323 | 669 |
Base content per 1 kb (bases) | 420 | 580 | 228 | 192 | 189 | 391 |
Base content (%) | 42.0% | 58.0% |
ATP6 (size: 683 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 270 | 413 | 184 | 86 | 197 | 216 |
Base content per 1 kb (bases) | 395 | 605 | 269 | 126 | 288 | 316 |
Base content (%) | 39.5% | 60.5% |
ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 69 | 99 | 47 | 22 | 38 | 61 |
Base content per 1 kb (bases) | 411 | 589 | 280 | 131 | 226 | 363 |
Base content (%) | 41.1% | 58.9% |
COX1 (size: 1593 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 679 | 914 | 397 | 282 | 461 | 453 |
Base content per 1 kb (bases) | 426 | 574 | 249 | 177 | 289 | 284 |
Base content (%) | 42.6% | 57.4% |
COX2 (size: 691 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 295 | 396 | 177 | 118 | 175 | 221 |
Base content per 1 kb (bases) | 427 | 573 | 256 | 171 | 253 | 320 |
Base content (%) | 42.7% | 57.3% |
COX3 (size: 785 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 339 | 446 | 214 | 125 | 205 | 241 |
Base content per 1 kb (bases) | 432 | 568 | 273 | 159 | 261 | 307 |
Base content (%) | 43.2% | 56.8% |
CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 487 | 653 | 324 | 163 | 313 | 340 |
Base content per 1 kb (bases) | 427 | 573 | 284 | 143 | 275 | 298 |
Base content (%) | 42.7% | 57.3% |
ND1 (size: 972 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 407 | 565 | 283 | 124 | 244 | 321 |
Base content per 1 kb (bases) | 419 | 581 | 291 | 128 | 251 | 330 |
Base content (%) | 41.9% | 58.1% |
ND2 (size: 1045 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 408 | 637 | 288 | 120 | 228 | 409 |
Base content per 1 kb (bases) | 390 | 610 | 276 | 115 | 218 | 391 |
Base content (%) | 39.0% | 61.0% |
ND3 (size: 349 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 149 | 200 | 97 | 52 | 105 | 95 |
Base content per 1 kb (bases) | 427 | 573 | 278 | 149 | 301 | 272 |
Base content (%) | 42.7% | 57.3% |
ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 556 | 825 | 370 | 186 | 366 | 459 |
Base content per 1 kb (bases) | 403 | 597 | 268 | 135 | 265 | 332 |
Base content (%) | 40.3% | 59.7% |
ND4L (size: 297 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 127 | 170 | 87 | 40 | 87 | 83 |
Base content per 1 kb (bases) | 428 | 572 | 293 | 135 | 293 | 279 |
Base content (%) | 42.8% | 57.2% |
ND5 (size: 1842 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 721 | 1121 | 493 | 228 | 469 | 652 |
Base content per 1 kb (bases) | 391 | 609 | 268 | 124 | 255 | 354 |
Base content (%) | 39.1% | 60.9% |
ND6 (size: 522 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 206 | 316 | 150 | 56 | 80 | 236 |
Base content per 1 kb (bases) | 395 | 605 | 287 | 107 | 153 | 452 |
Base content (%) | 39.5% | 60.5% |
ATP6 (size: 683 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
7 | 9 | 11 | 7 | 5 | 26 | 3 | 9 | 9 | 0 | 4 | 3 | 11 | 0 | 6 | 6 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 0 | 4 | 3 | 8 | 0 | 3 | 1 | 5 | 1 | 3 | 2 | 10 | 1 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
7 | 14 | 0 | 2 | 2 | 0 | 0 | 1 | 5 | 3 | 2 | 2 | 1 | 4 | 4 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 4 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 3 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
48 | 75 | 68 | 36 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
27 | 58 | 31 | 111 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
11 | 51 | 116 | 49 |
ATP8 (size: 168 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: MPQLNPAPWFMILVFSWAVFLAILPTKVMAHTFNNEPSQQTAKKPKMDSWNWPWY* | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
1 | 1 | 2 | 0 | 1 | 1 | 0 | 2 | 2 | 1 | 0 | 0 | 2 | 1 | 2 | 2 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 3 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 1 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
10 | 13 | 18 | 15 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
6 | 17 | 16 | 17 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
6 | 17 | 27 | 6 |
COX1 (size: 1593 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
25 | 14 | 13 | 12 | 5 | 30 | 4 | 10 | 9 | 0 | 9 | 7 | 24 | 4 | 20 | 21 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
10 | 1 | 0 | 11 | 19 | 14 | 2 | 10 | 9 | 23 | 6 | 6 | 3 | 19 | 2 | 7 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
11 | 20 | 0 | 5 | 7 | 11 | 1 | 1 | 3 | 7 | 12 | 0 | 1 | 7 | 7 | 7 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
12 | 14 | 0 | 6 | 11 | 11 | 0 | 4 | 0 | 4 | 1 | 0 | 1 | 0 | 0 | 18 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
169 | 118 | 130 | 114 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
81 | 138 | 103 | 209 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
32 | 141 | 220 | 138 |
COX2 (size: 691 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
11 | 7 | 8 | 5 | 2 | 12 | 2 | 5 | 8 | 1 | 4 | 5 | 10 | 2 | 2 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 0 | 2 | 0 | 6 | 13 | 1 | 2 | 0 | 6 | 1 | 1 | 5 | 8 | 0 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 5 | 0 | 2 | 1 | 6 | 1 | 0 | 3 | 6 | 3 | 0 | 1 | 0 | 5 | 6 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 12 | 2 | 3 | 10 | 3 | 0 | 0 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
77 | 60 | 52 | 41 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
25 | 54 | 63 | 88 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
16 | 63 | 106 | 45 |
COX3 (size: 785 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
8 | 6 | 8 | 4 | 1 | 21 | 0 | 3 | 9 | 0 | 3 | 5 | 10 | 0 | 10 | 14 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 2 | 1 | 12 | 8 | 0 | 2 | 5 | 13 | 1 | 1 | 1 | 9 | 1 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
8 | 14 | 0 | 1 | 1 | 8 | 0 | 0 | 3 | 7 | 5 | 2 | 0 | 0 | 1 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
11 | 8 | 2 | 2 | 3 | 3 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
75 | 67 | 56 | 63 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 69 | 55 | 94 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
7 | 78 | 129 | 47 |
CYTB (size: 1140 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
14 | 10 | 12 | 8 | 12 | 26 | 5 | 10 | 6 | 0 | 4 | 4 | 18 | 3 | 8 | 21 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 1 | 2 | 4 | 14 | 9 | 0 | 3 | 5 | 17 | 1 | 2 | 0 | 20 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
10 | 9 | 0 | 3 | 7 | 12 | 1 | 0 | 0 | 4 | 12 | 1 | 0 | 3 | 18 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
9 | 4 | 1 | 2 | 9 | 8 | 1 | 1 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
98 | 99 | 88 | 95 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
50 | 92 | 81 | 157 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
15 | 133 | 171 | 61 |
ND1 (size: 972 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
11 | 13 | 14 | 11 | 6 | 31 | 1 | 11 | 4 | 1 | 2 | 3 | 11 | 0 | 6 | 10 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 0 | 2 | 19 | 13 | 0 | 0 | 6 | 12 | 0 | 3 | 3 | 18 | 0 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
6 | 12 | 1 | 0 | 4 | 12 | 0 | 0 | 2 | 5 | 7 | 0 | 0 | 2 | 14 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 12 | 0 | 0 | 3 | 8 | 0 | 1 | 1 | 6 | 0 | 0 | 0 | 1 | 0 | 8 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
83 | 89 | 88 | 64 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
36 | 96 | 60 | 132 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
5 | 98 | 173 | 48 |
ND2 (size: 1045 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
12 | 16 | 28 | 3 | 6 | 39 | 1 | 5 | 14 | 0 | 1 | 1 | 7 | 0 | 2 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 0 | 1 | 3 | 16 | 13 | 0 | 1 | 4 | 12 | 2 | 2 | 2 | 16 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 36 | 0 | 2 | 1 | 11 | 0 | 2 | 2 | 3 | 5 | 0 | 2 | 4 | 5 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 6 | 0 | 0 | 2 | 13 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
68 | 94 | 136 | 50 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
39 | 113 | 59 | 137 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
13 | 81 | 214 | 40 |
ND3 (size: 1045 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
12 | 16 | 28 | 3 | 6 | 39 | 1 | 5 | 14 | 0 | 1 | 1 | 7 | 0 | 2 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 0 | 1 | 3 | 16 | 13 | 0 | 1 | 4 | 12 | 2 | 2 | 2 | 16 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 36 | 0 | 2 | 1 | 11 | 0 | 2 | 2 | 3 | 5 | 0 | 2 | 4 | 5 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 6 | 0 | 0 | 2 | 13 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
68 | 94 | 136 | 50 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
39 | 113 | 59 | 137 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
13 | 81 | 214 | 40 |
ND4 (size: 1381 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
24 | 19 | 26 | 7 | 11 | 46 | 3 | 19 | 10 | 1 | 1 | 3 | 12 | 1 | 5 | 10 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 5 | 5 | 12 | 15 | 2 | 3 | 8 | 14 | 4 | 3 | 5 | 16 | 0 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
16 | 16 | 1 | 5 | 5 | 13 | 0 | 2 | 3 | 8 | 7 | 1 | 0 | 2 | 11 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
6 | 12 | 0 | 2 | 3 | 11 | 2 | 1 | 2 | 9 | 0 | 0 | 0 | 0 | 0 | 19 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
97 | 124 | 142 | 97 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
71 | 120 | 79 | 190 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
18 | 126 | 238 | 78 |
ND4L (size: 297 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
1 | 0 | 6 | 2 | 2 | 8 | 1 | 6 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 2 | 1 | 2 | 7 | 4 | 0 | 0 | 3 | 1 | 0 | 0 | 1 | 1 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 5 | 0 | 1 | 4 | 4 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
3 | 3 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
24 | 24 | 21 | 30 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
12 | 32 | 16 | 39 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
4 | 31 | 46 | 18 |
ND5 (size: 1842 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
22 | 28 | 35 | 13 | 11 | 45 | 2 | 15 | 22 | 0 | 6 | 9 | 17 | 0 | 12 | 28 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
6 | 3 | 3 | 11 | 18 | 21 | 1 | 4 | 6 | 19 | 2 | 2 | 5 | 23 | 0 | 7 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
14 | 32 | 1 | 5 | 3 | 15 | 1 | 1 | 10 | 2 | 11 | 1 | 1 | 7 | 27 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
8 | 11 | 1 | 5 | 8 | 26 | 0 | 0 | 0 | 7 | 2 | 0 | 0 | 1 | 0 | 13 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
139 | 145 | 216 | 114 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
71 | 159 | 134 | 250 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
18 | 189 | 302 | 105 |
ND6 (size: 522 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
10 | 0 | 2 | 7 | 0 | 0 | 0 | 13 | 0 | 0 | 8 | 1 | 4 | 5 | 13 | 2 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 5 | 0 | 10 | 2 | 4 | 0 | 8 | 1 | 4 | 12 | 2 | 0 | 1 | 1 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
0 | 0 | 0 | 5 | 0 | 2 | 1 | 2 | 1 | 11 | 2 | 2 | 8 | 1 | 0 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 1 | 4 | 5 | 0 | 0 | 0 | 4 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 2 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
69 | 17 | 21 | 67 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 30 | 25 | 76 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
38 | 9 | 34 | 93 |
Total protein-coding genes (size: 11468 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
155 | 125 | 166 | 85 | 64 | 296 | 24 | 109 | 98 | 4 | 42 | 43 | 130 | 18 | 93 | 138 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
48 | 12 | 18 | 56 | 131 | 127 | 6 | 36 | 49 | 130 | 31 | 26 | 32 | 151 | 5 | 40 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
88 | 167 | 4 | 31 | 39 | 100 | 5 | 10 | 34 | 56 | 70 | 11 | 15 | 33 | 97 | 38 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
61 | 94 | 10 | 28 | 54 | 90 | 3 | 13 | 5 | 53 | 6 | 0 | 1 | 5 | 1 | 110 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
985 | 961 | 1061 | 813 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
519 | 1008 | 742 | 1551 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
192 | 1048 | 1826 | 754 |
Failed to understand id: ?term=("Anguilla australis"[Organism]) AND (refseq[filter] AND mitochondrion[filter])