Viewing data for Sphenodon punctatus
| Scientific name | Sphenodon punctatus |
| Common name | Tuatara |
| Maximum lifespan | 90.00 years (Sphenodon punctatus@AnAge) |
| Total mtDNA (size: 15181 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6051 | 9130 | 3921 | 2130 | 4083 | 5047 |
| Base content per 1 kb (bases) | 399 | 601 | 258 | 140 | 269 | 332 |
| Base content (%) | 39.9% | 60.1% | ||||
| Total protein-coding genes (size: 9561 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 3861 | 5700 | 2615 | 1246 | 2569 | 3131 |
| Base content per 1 kb (bases) | 404 | 596 | 274 | 130 | 269 | 327 |
| Base content (%) | 40.4% | 59.6% | ||||
| D-loop (size: 1749 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 602 | 1147 | 396 | 206 | 615 | 532 |
| Base content per 1 kb (bases) | 344 | 656 | 226 | 118 | 352 | 304 |
| Base content (%) | 34.4% | 65.6% | ||||
| Total tRNA-coding genes (size: 1436 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 578 | 858 | 335 | 243 | 377 | 481 |
| Base content per 1 kb (bases) | 403 | 597 | 233 | 169 | 263 | 335 |
| Base content (%) | 40.3% | 59.7% | ||||
| Total rRNA-coding genes (size: 2422 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 999 | 1423 | 562 | 437 | 521 | 902 |
| Base content per 1 kb (bases) | 412 | 588 | 232 | 180 | 215 | 372 |
| Base content (%) | 41.2% | 58.8% | ||||
| 12S rRNA gene (size: 905 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 392 | 513 | 220 | 172 | 185 | 328 |
| Base content per 1 kb (bases) | 433 | 567 | 243 | 190 | 204 | 362 |
| Base content (%) | 43.3% | 56.7% | ||||
| 16S rRNA gene (size: 1517 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 607 | 910 | 342 | 265 | 336 | 574 |
| Base content per 1 kb (bases) | 400 | 600 | 225 | 175 | 221 | 378 |
| Base content (%) | 40.0% | 60.0% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 288 | 396 | 199 | 89 | 178 | 218 |
| Base content per 1 kb (bases) | 421 | 579 | 291 | 130 | 260 | 319 |
| Base content (%) | 42.1% | 57.9% | ||||
| ATP8 (size: 154 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 73 | 81 | 48 | 25 | 36 | 45 |
| Base content per 1 kb (bases) | 474 | 526 | 312 | 162 | 234 | 292 |
| Base content (%) | 47.4% | 52.6% | ||||
| COX1 (size: 1560 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 644 | 916 | 408 | 236 | 424 | 492 |
| Base content per 1 kb (bases) | 413 | 587 | 262 | 151 | 272 | 315 |
| Base content (%) | 41.3% | 58.7% | ||||
| COX2 (size: 687 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 288 | 399 | 202 | 86 | 159 | 240 |
| Base content per 1 kb (bases) | 419 | 581 | 294 | 125 | 231 | 349 |
| Base content (%) | 41.9% | 58.1% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 328 | 456 | 199 | 129 | 237 | 219 |
| Base content per 1 kb (bases) | 418 | 582 | 254 | 165 | 302 | 279 |
| Base content (%) | 41.8% | 58.2% | ||||
| CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 467 | 676 | 315 | 152 | 321 | 355 |
| Base content per 1 kb (bases) | 409 | 591 | 276 | 133 | 281 | 311 |
| Base content (%) | 40.9% | 59.1% | ||||
| ND1 (size: 967 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 363 | 604 | 238 | 125 | 277 | 327 |
| Base content per 1 kb (bases) | 375 | 625 | 246 | 129 | 286 | 338 |
| Base content (%) | 37.5% | 62.5% | ||||
| ND2 (size: 1041 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 398 | 643 | 291 | 107 | 293 | 350 |
| Base content per 1 kb (bases) | 382 | 618 | 280 | 103 | 281 | 336 |
| Base content (%) | 38.2% | 61.8% | ||||
| ND3 (size: 349 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 139 | 210 | 97 | 42 | 106 | 104 |
| Base content per 1 kb (bases) | 398 | 602 | 278 | 120 | 304 | 298 |
| Base content (%) | 39.8% | 60.2% | ||||
| ND4 (size: 1383 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 539 | 844 | 379 | 160 | 391 | 453 |
| Base content per 1 kb (bases) | 390 | 610 | 274 | 116 | 283 | 328 |
| Base content (%) | 39.0% | 61.0% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 116 | 181 | 77 | 39 | 93 | 88 |
| Base content per 1 kb (bases) | 391 | 609 | 259 | 131 | 313 | 296 |
| Base content (%) | 39.1% | 60.9% | ||||
ND5:
No data available for this section.
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 221 | 304 | 163 | 58 | 58 | 246 |
| Base content per 1 kb (bases) | 421 | 579 | 310 | 110 | 110 | 469 |
| Base content (%) | 42.1% | 57.9% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MIPNLFEIFATPYLLKMPLMWLAVMMPAMVLFTPSQHLVTGRYILLKKWTMKQFTKQIMNPLPTQGHKWTVFFMTLMMTLTSMNMISLLP View full | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 6 (2.64%) 
Alanine (Ala, A)
n = 22 (9.69%) 
Serine (Ser, S)
n = 7 (3.08%) 
Threonine (Thr, T)
n = 25 (11.01%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 16 (7.05%) 
Leucine (Leu, L)
n = 45 (19.82%) 
Isoleucine (Ile, I)
n = 16 (7.05%) 
Methionine (Met, M)
n = 18 (7.93%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 10 (4.41%) 
Tyrosine (Tyr, Y)
n = 4 (1.76%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 0 (0%) 
Glutamic acid (Glu, E)
n = 5 (2.2%) 
Asparagine (Asn, N)
n = 5 (2.2%) 
Glutamine (Gln, Q)
n = 8 (3.52%) 
Histidine (His, H)
n = 6 (2.64%) 
Lysine (Lys, K)
n = 8 (3.52%) 
Arginine (Arg, R)
n = 4 (1.76%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 9 | 12 | 10 | 7 | 18 | 1 | 8 | 7 | 1 | 2 | 0 | 10 | 4 | 6 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 0 | 2 | 9 | 10 | 1 | 1 | 1 | 2 | 2 | 2 | 5 | 8 | 2 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 11 | 2 | 0 | 2 | 2 | 0 | 1 | 2 | 2 | 2 | 1 | 1 | 0 | 5 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 5 | 0 | 0 | 0 | 7 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 49 | 71 | 75 | 33 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 18 | 68 | 37 | 105 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 22 | 60 | 106 | 40 | ||||||||||||
| ATP8 (size: 154 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPAPWLSTMVLVWLSLGVMHQKVKLFQNIYPTTMCCGAPRPPWPWPW | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 2 (4.0%)
Alanine (Ala, A)
n = 2 (4.0%)
Serine (Ser, S)
n = 2 (4.0%)
Threonine (Thr, T)
n = 3 (6.0%)
Cysteine (Cys, C)
n = 2 (4.0%)
Valine (Val, V)
n = 4 (8.0%)
Leucine (Leu, L)
n = 6 (12.0%)
Isoleucine (Ile, I)
n = 1 (2.0%)
Methionine (Met, M)
n = 4 (8.0%)
Proline (Pro, P)
n = 9 (18.0%)
Phenylalanine (Phe, F)
n = 1 (2.0%)
Tyrosine (Tyr, Y)
n = 1 (2.0%)
Tryptophan (Trp, W)
n = 5 (10.0%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 2 (4.0%)
Glutamine (Gln, Q)
n = 3 (6.0%)
Histidine (His, H)
n = 1 (2.0%)
Lysine (Lys, K)
n = 2 (4.0%)
Arginine (Arg, R)
n = 1 (2.0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 0 | 2 | 0 | 1 | 4 | 0 | 1 | 3 | 0 | 0 | 1 | 1 | 2 | 0 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 3 | 2 | 1 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 8 | 19 | 12 | 12 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 10 | 16 | 9 | 16 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 13 | 24 | 7 | ||||||||||||
| COX1 (size: 1560 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: ILPLPYKRWLYSTNHKDIGTLYLLFGAWAGMVGTSLSLLIRGELSYPGTLMGNDQIYNVIVTAHAFTMIFFMVMPVMIGGFGNWLIPLMI View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.86%)
Alanine (Ala, A)
n = 35 (6.74%)
Serine (Ser, S)
n = 34 (6.55%)
Threonine (Thr, T)
n = 39 (7.51%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 28 (5.39%)
Leucine (Leu, L)
n = 66 (12.72%)
Isoleucine (Ile, I)
n = 42 (8.09%)
Methionine (Met, M)
n = 28 (5.39%)
Proline (Pro, P)
n = 31 (5.97%)
Phenylalanine (Phe, F)
n = 39 (7.51%)
Tyrosine (Tyr, Y)
n = 21 (4.05%)
Tryptophan (Trp, W)
n = 18 (3.47%)
Aspartic acid (Asp, D)
n = 15 (2.89%)
Glutamic acid (Glu, E)
n = 11 (2.12%)
Asparagine (Asn, N)
n = 18 (3.47%)
Glutamine (Gln, Q)
n = 9 (1.73%)
Histidine (His, H)
n = 20 (3.85%)
Lysine (Lys, K)
n = 11 (2.12%)
Arginine (Arg, R)
n = 8 (1.54%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 20 | 22 | 7 | 7 | 28 | 2 | 19 | 9 | 0 | 1 | 5 | 22 | 0 | 21 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 0 | 6 | 10 | 18 | 1 | 2 | 7 | 33 | 4 | 5 | 8 | 17 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 19 | 0 | 7 | 8 | 13 | 0 | 1 | 5 | 7 | 14 | 1 | 3 | 3 | 15 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 16 | 9 | 2 | 1 | 14 | 10 | 1 | 0 | 2 | 6 | 0 | 0 | 1 | 0 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 135 | 112 | 145 | 128 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 79 | 133 | 105 | 203 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 22 | 163 | 242 | 93 | ||||||||||||
| COX2 (size: 687 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MAYPMQIALQNASSPLMEELLHFHDHALMVILLISTSVFYMITMTLTTKLTHINATDAPITETVWTILPSIILVTIALPSLQILYLMDEI View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.07%)
Alanine (Ala, A)
n = 14 (6.14%)
Serine (Ser, S)
n = 18 (7.89%)
Threonine (Thr, T)
n = 20 (8.77%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 13 (5.7%)
Leucine (Leu, L)
n = 28 (12.28%)
Isoleucine (Ile, I)
n = 23 (10.09%)
Methionine (Met, M)
n = 10 (4.39%)
Proline (Pro, P)
n = 13 (5.7%)
Phenylalanine (Phe, F)
n = 8 (3.51%)
Tyrosine (Tyr, Y)
n = 9 (3.95%)
Tryptophan (Trp, W)
n = 6 (2.63%)
Aspartic acid (Asp, D)
n = 10 (4.39%)
Glutamic acid (Glu, E)
n = 11 (4.82%)
Asparagine (Asn, N)
n = 7 (3.07%)
Glutamine (Gln, Q)
n = 7 (3.07%)
Histidine (His, H)
n = 11 (4.82%)
Lysine (Lys, K)
n = 7 (3.07%)
Arginine (Arg, R)
n = 4 (1.75%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 13 | 9 | 3 | 2 | 18 | 2 | 2 | 7 | 0 | 1 | 3 | 8 | 1 | 4 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 2 | 1 | 8 | 5 | 0 | 0 | 3 | 4 | 0 | 2 | 2 | 8 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 13 | 0 | 2 | 4 | 9 | 0 | 0 | 3 | 1 | 8 | 1 | 1 | 1 | 6 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 9 | 2 | 2 | 8 | 7 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 55 | 60 | 70 | 44 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 22 | 62 | 63 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 80 | 107 | 33 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPTQTHTYHIVEQSPWPITGAMSALLMTSGLAVWFHYNSTTLIVTGLLSLLLTMYQWWRDIMREGTFQGHHTLFVQKGLRYGMILFIVSE View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 17 (6.54%)
Threonine (Thr, T)
n = 27 (10.38%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 18 (6.92%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 3 (1.15%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 7 | 8 | 5 | 3 | 11 | 0 | 11 | 8 | 0 | 3 | 3 | 10 | 2 | 15 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 1 | 0 | 8 | 6 | 0 | 3 | 3 | 8 | 6 | 2 | 3 | 4 | 2 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 13 | 1 | 5 | 5 | 3 | 1 | 1 | 2 | 7 | 4 | 3 | 2 | 1 | 2 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 5 | 4 | 2 | 3 | 3 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 66 | 58 | 61 | 76 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 66 | 54 | 100 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 22 | 75 | 104 | 60 | ||||||||||||
| CYTB (size: 1143 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MIETIRKHHPIIKVLNHAFIDLPSPSNISAWWNFGSLLGLCLIIQLITGVFLAMHYTADVSLAFSSISHICRNVNYGWLIRNMHANGASL View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.84%)
Alanine (Ala, A)
n = 20 (5.26%)
Serine (Ser, S)
n = 26 (6.84%)
Threonine (Thr, T)
n = 28 (7.37%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 18 (4.74%)
Leucine (Leu, L)
n = 56 (14.74%)
Isoleucine (Ile, I)
n = 39 (10.26%)
Methionine (Met, M)
n = 18 (4.74%)
Proline (Pro, P)
n = 23 (6.05%)
Phenylalanine (Phe, F)
n = 24 (6.32%)
Tyrosine (Tyr, Y)
n = 16 (4.21%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 6 (1.58%)
Glutamic acid (Glu, E)
n = 7 (1.84%)
Asparagine (Asn, N)
n = 21 (5.53%)
Glutamine (Gln, Q)
n = 5 (1.32%)
Histidine (His, H)
n = 14 (3.68%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 21 | 15 | 5 | 12 | 15 | 4 | 17 | 4 | 1 | 1 | 4 | 11 | 2 | 9 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 2 | 2 | 8 | 10 | 0 | 1 | 6 | 16 | 3 | 2 | 5 | 15 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 13 | 0 | 3 | 10 | 9 | 1 | 1 | 2 | 5 | 11 | 0 | 3 | 8 | 13 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 6 | 1 | 0 | 6 | 8 | 2 | 0 | 2 | 5 | 1 | 0 | 0 | 0 | 1 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 77 | 86 | 119 | 99 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 94 | 80 | 155 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 135 | 156 | 67 | ||||||||||||
| ND1 (size: 967 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MLSLLTWLMNPLMYIIPILIAVAFLTLLERKILGYMQLRKGPNMVGPKGILQPIADGLKLFMKEPVRPYAASQALFIMAPILALSLSIML View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (5.3%)
Alanine (Ala, A)
n = 23 (7.17%)
Serine (Ser, S)
n = 24 (7.48%)
Threonine (Thr, T)
n = 23 (7.17%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 11 (3.43%)
Leucine (Leu, L)
n = 52 (16.2%)
Isoleucine (Ile, I)
n = 27 (8.41%)
Methionine (Met, M)
n = 32 (9.97%)
Proline (Pro, P)
n = 22 (6.85%)
Phenylalanine (Phe, F)
n = 15 (4.67%)
Tyrosine (Tyr, Y)
n = 10 (3.12%)
Tryptophan (Trp, W)
n = 11 (3.43%)
Aspartic acid (Asp, D)
n = 4 (1.25%)
Glutamic acid (Glu, E)
n = 11 (3.43%)
Asparagine (Asn, N)
n = 12 (3.74%)
Glutamine (Gln, Q)
n = 8 (2.49%)
Histidine (His, H)
n = 2 (0.62%)
Lysine (Lys, K)
n = 8 (2.49%)
Arginine (Arg, R)
n = 8 (2.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 11 | 28 | 7 | 6 | 20 | 2 | 17 | 8 | 0 | 1 | 3 | 7 | 0 | 7 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 2 | 2 | 7 | 12 | 2 | 1 | 6 | 6 | 4 | 5 | 1 | 16 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 13 | 1 | 7 | 5 | 9 | 1 | 0 | 2 | 6 | 4 | 2 | 0 | 6 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 9 | 2 | 1 | 3 | 7 | 1 | 0 | 1 | 7 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 66 | 75 | 104 | 77 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 90 | 55 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 19 | 73 | 168 | 62 | ||||||||||||
| ND2 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MHPSITSLLLIALSTSTIITMSSYHWMFAWAGLEINMLSMLPLISKEHHPRAVEATMKYFMTQAAASAMLIFASTINAWQTAQWDISLLT View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.47%)
Alanine (Ala, A)
n = 24 (6.94%)
Serine (Ser, S)
n = 31 (8.96%)
Threonine (Thr, T)
n = 33 (9.54%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.89%)
Leucine (Leu, L)
n = 66 (19.08%)
Isoleucine (Ile, I)
n = 31 (8.96%)
Methionine (Met, M)
n = 30 (8.67%)
Proline (Pro, P)
n = 18 (5.2%)
Phenylalanine (Phe, F)
n = 14 (4.05%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 14 (4.05%)
Glutamine (Gln, Q)
n = 13 (3.76%)
Histidine (His, H)
n = 12 (3.47%)
Lysine (Lys, K)
n = 10 (2.89%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 10 | 24 | 6 | 9 | 20 | 4 | 20 | 13 | 0 | 4 | 0 | 5 | 1 | 5 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 0 | 4 | 16 | 4 | 0 | 1 | 2 | 7 | 2 | 0 | 6 | 12 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 15 | 0 | 3 | 8 | 13 | 0 | 0 | 7 | 3 | 4 | 0 | 7 | 4 | 10 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 5 | 0 | 0 | 2 | 9 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 53 | 86 | 125 | 83 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 99 | 64 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 106 | 161 | 59 | ||||||||||||
| ND3 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MHPSITSLLLIALSTSTIITMSSYHWMFAWAGLEINMLSMLPLISKEHHPRAVEATMKYFMTQAAASAMLIFASTINAWQTAQWDISLLT View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.47%)
Alanine (Ala, A)
n = 24 (6.94%)
Serine (Ser, S)
n = 31 (8.96%)
Threonine (Thr, T)
n = 33 (9.54%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.89%)
Leucine (Leu, L)
n = 66 (19.08%)
Isoleucine (Ile, I)
n = 31 (8.96%)
Methionine (Met, M)
n = 30 (8.67%)
Proline (Pro, P)
n = 18 (5.2%)
Phenylalanine (Phe, F)
n = 14 (4.05%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 14 (4.05%)
Glutamine (Gln, Q)
n = 13 (3.76%)
Histidine (His, H)
n = 12 (3.47%)
Lysine (Lys, K)
n = 10 (2.89%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 10 | 24 | 6 | 9 | 20 | 4 | 20 | 13 | 0 | 4 | 0 | 5 | 1 | 5 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 0 | 4 | 16 | 4 | 0 | 1 | 2 | 7 | 2 | 0 | 6 | 12 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 15 | 0 | 3 | 8 | 13 | 0 | 0 | 7 | 3 | 4 | 0 | 7 | 4 | 10 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 5 | 0 | 0 | 2 | 9 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 53 | 86 | 125 | 83 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 99 | 64 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 106 | 161 | 59 | ||||||||||||
| ND4 (size: 1383 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MLKIIIPTIFLLPVILLSNPKSTWMNFFINNLLISATSLTILKPQINTEWKFSSPYTGLDHISSPLLVLTTWLLPLMTLASQNSLKKEPY View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.91%)
Alanine (Ala, A)
n = 27 (5.87%)
Serine (Ser, S)
n = 35 (7.61%)
Threonine (Thr, T)
n = 46 (10.0%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 16 (3.48%)
Leucine (Leu, L)
n = 92 (20.0%)
Isoleucine (Ile, I)
n = 39 (8.48%)
Methionine (Met, M)
n = 27 (5.87%)
Proline (Pro, P)
n = 26 (5.65%)
Phenylalanine (Phe, F)
n = 23 (5.0%)
Tyrosine (Tyr, Y)
n = 12 (2.61%)
Tryptophan (Trp, W)
n = 12 (2.61%)
Aspartic acid (Asp, D)
n = 3 (0.65%)
Glutamic acid (Glu, E)
n = 11 (2.39%)
Asparagine (Asn, N)
n = 23 (5.0%)
Glutamine (Gln, Q)
n = 10 (2.17%)
Histidine (His, H)
n = 12 (2.61%)
Lysine (Lys, K)
n = 14 (3.04%)
Arginine (Arg, R)
n = 9 (1.96%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 18 | 22 | 17 | 10 | 31 | 8 | 24 | 9 | 1 | 2 | 3 | 9 | 2 | 9 | 14 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 3 | 2 | 2 | 15 | 10 | 0 | 1 | 6 | 9 | 2 | 2 | 5 | 18 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 28 | 5 | 6 | 9 | 10 | 0 | 2 | 8 | 9 | 3 | 0 | 2 | 5 | 18 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 9 | 2 | 2 | 1 | 11 | 3 | 3 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 123 | 159 | 104 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 124 | 86 | 197 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 31 | 132 | 208 | 90 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPTILFNLGLAFMTSMMGLSLQRSHLISALLCLEGMMLTLFLMLTTWATEQQSSLLFSALMMLLTLSACGAGTGLSLLVTTTRTHGSSNM View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 7 (7.14%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 11 (11.22%)
Threonine (Thr, T)
n = 12 (12.24%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 1 (1.02%)
Leucine (Leu, L)
n = 25 (25.51%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 10 (10.2%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 4 (4.08%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 9 | 5 | 2 | 4 | 3 | 9 | 3 | 1 | 0 | 0 | 1 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 3 | 2 | 3 | 0 | 1 | 0 | 5 | 2 | 0 | 1 | 0 | 0 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 7 | 0 | 3 | 3 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 2 | 3 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 16 | 23 | 31 | 29 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 15 | 28 | 14 | 42 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 26 | 43 | 22 | ||||||||||||
ND5:
No data available for this section.
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MTYAIFLFGLCFVFGLLLVASNPSPYYGVLGLLMASAVGGGFLVGVGSSFLSVILFLIYSGGMLVVFAYSVALAADFYPEAWGSRSVAVN View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (14.94%)
Alanine (Ala, A)
n = 13 (7.47%)
Serine (Ser, S)
n = 19 (10.92%)
Threonine (Thr, T)
n = 3 (1.72%)
Cysteine (Cys, C)
n = 2 (1.15%)
Valine (Val, V)
n = 27 (15.52%)
Leucine (Leu, L)
n = 28 (16.09%)
Isoleucine (Ile, I)
n = 6 (3.45%)
Methionine (Met, M)
n = 3 (1.72%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 16 (9.2%)
Tyrosine (Tyr, Y)
n = 7 (4.02%)
Tryptophan (Trp, W)
n = 3 (1.72%)
Aspartic acid (Asp, D)
n = 4 (2.3%)
Glutamic acid (Glu, E)
n = 4 (2.3%)
Asparagine (Asn, N)
n = 2 (1.15%)
Glutamine (Gln, Q)
n = 1 (0.57%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.15%)
Arginine (Arg, R)
n = 5 (2.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 0 | 1 | 4 | 0 | 1 | 1 | 8 | 0 | 1 | 15 | 3 | 2 | 7 | 15 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 0 | 10 | 1 | 0 | 2 | 13 | 1 | 1 | 11 | 2 | 1 | 0 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 0 | 12 | 1 | 1 | 2 | 3 | 0 | 7 | 0 | 2 | 14 | 2 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 3 | 4 | 0 | 1 | 1 | 3 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 15 | 20 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 35 | 20 | 80 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 49 | 8 | 18 | 100 | ||||||||||||
| Total protein-coding genes (size: 9574 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MLSLLTWLMNPLMYIIPILIAVAFLTLLERKILGYMQLRKGPNMVGPKGILQPIADGLKLFMKEPVRPYAASQALFIMAPILALSLSIML View full | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 191 (5.99%)
Alanine (Ala, A)
n = 208 (6.52%)
Serine (Ser, S)
n = 230 (7.21%)
Threonine (Thr, T)
n = 269 (8.44%)
Cysteine (Cys, C)
n = 21 (0.66%)
Valine (Val, V)
n = 165 (5.17%)
Leucine (Leu, L)
n = 523 (16.4%)
Isoleucine (Ile, I)
n = 250 (7.84%)
Methionine (Met, M)
n = 197 (6.18%)
Proline (Pro, P)
n = 182 (5.71%)
Phenylalanine (Phe, F)
n = 185 (5.8%)
Tyrosine (Tyr, Y)
n = 100 (3.14%)
Tryptophan (Trp, W)
n = 100 (3.14%)
Aspartic acid (Asp, D)
n = 51 (1.6%)
Glutamic acid (Glu, E)
n = 82 (2.57%)
Asparagine (Asn, N)
n = 116 (3.64%)
Glutamine (Gln, Q)
n = 80 (2.51%)
Histidine (His, H)
n = 96 (3.01%)
Lysine (Lys, K)
n = 76 (2.38%)
Arginine (Arg, R)
n = 60 (1.88%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 136 | 114 | 157 | 72 | 65 | 178 | 28 | 143 | 75 | 5 | 31 | 26 | 87 | 21 | 98 | 87 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 40 | 6 | 15 | 33 | 90 | 78 | 7 | 23 | 41 | 92 | 35 | 28 | 39 | 106 | 9 | 37 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 84 | 139 | 9 | 51 | 57 | 75 | 5 | 10 | 32 | 49 | 51 | 11 | 37 | 34 | 82 | 28 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 68 | 65 | 17 | 13 | 38 | 66 | 10 | 8 | 14 | 35 | 3 | 0 | 2 | 5 | 1 | 89 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 697 | 761 | 952 | 780 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 416 | 847 | 607 | 1320 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 240 | 903 | 1390 | 657 | ||||||||||||
>NC_004815.1 Sphenodon punctatus mitochondrion, complete genome GCTGGCGTAGCAAAACCTGGATATGCTAAAGACTTAAGCACTTTTACACAGAGGTTCAACTCCTCTCGCC AACAATGCTATCTCTACTAACCTGACTGATAAACCCACTTATATACATCATCCCAATCCTAATTGCAGTA GCATTCTTAACATTACTAGAACGAAAAATTCTAGGATATATACAATTACGAAAAGGCCCAAATATAGTAG GCCCAAAGGGGATTCTACAACCTATTGCAGATGGCCTAAAACTATTTATAAAAGAACCAGTACGCCCATA TGCCGCCTCCCAAGCACTATTCATTATGGCCCCAATCTTAGCGTTATCATTATCCATTATATTATGATCA CCTCTTTCAATACCATTTCCTTTAATGGACATAAACCTCGGCCTGTTAATCATACTCGCACTTTCAAGCA TAGCAGTATATACAATCTTATGATCGGGCTGATCCTCAAATTCTAAATACGCTCTCATAGGGGCCATTCG AGCGGTAGCACAAACTATCTCTTATGAAGTCACACTAGGAATTATTATTTTATCTACAATCTTACTAAGC GGAGGATTTACAATTCAAACCCTAAACACCACGCAAGAACCAATATGACTCTTAATAACATCATGACCAA TAATAATAATATGGTTAACATCTACCCTTGCAGAAACAAACCGAGCCCCATTTGACCTAACAGAGGGTGA GTCTGAACTTGTCTCTGGATTTAATGTAGAATATTCAGCAGGCCCATTTGCTTTATTCTTCCTAGCAGAA TACGCCAATATCATAATAATAAACACAGTATCATGCATTATATTTATAAATCCAGGGCAAGGAATAATAC CAGAACTATTCACCATAAATATTATAATAAAAACAACTATCCTAACAATTTGATTCCTATGGGTCCGAGC CTCCTACCCTCGATTCCGATATGACCAACTCATACATCTTCTATGAAAAAACTTCCTCCCAATCACCCTA GCATTATGCCTTTGACACACATCCATGCCTATTACCTTATCAGGGGTTCCCCCAGCAATTTGGACATGTG CCTGAATAAAGGATCACTTTGATAGAGTGAACTAAAAAGGTTTAAACCCTTTCATCTCCTAGAAAAATGG GAATCGAACCCAAACATTAGAGACCAAAACTCCATGTACCCCATCATACTGTTTTCTAAAGTAAAGTCAG CTAATAAAGCTTCTGGGCCCATGCCCCAAAAATGTTGGTTAAACCCTTCCTTTACTAATGCACCCCTCCA TCACCTCTTTGCTCCTTATCGCCCTATCCACAAGCACTATTATTACAATATCAAGCTACCATTGAATATT CGCTTGAGCTGGATTGGAAATTAATATACTCTCTATACTACCCCTAATCTCAAAAGAACACCACCCCCGA GCCGTAGAAGCCACCATAAAATATTTCATGACACAAGCCGCCGCCTCAGCCATATTAATCTTCGCAAGCA CCATTAATGCTTGACAAACTGCCCAATGAGACATTTCATTACTCACACCCTCAACACCAATAATAATATT AACACTAGCTATTACCATAAAACTAGGCTTGGCCCCATTCCACTTCTGATTACCAGAAGTATCATTAGGA ACAACCAACTCAGTTATATTAATTATCACAACATGACAAAAACTGGCCCCACTAGCCATCATTATTCTAT TACATAACTCATTAAATCATCACTTATTGACCAGCCTCGGTCTTTTATCTATGGTAGTTGGGGGGTGAGG AGGAATGAACCAATTACAAATTCGAAAAATTATAGCATACTCCTCAATCGCCCATATAGGATGAGTAGTT ATAATTTTACCAAAAGCCCCAGACCTATCCCTACTGTACCTTATACTATATATTATGTTAAACCTCACAA TATTCTTAATTATTATTTCCACCGCCCTAACCAAGCTGACAAGCCTTTTTTCAACACAAAACAAATCATT CCCCATAATAATCTTGATAGCCCTAACCCTGCTTTCAATAGGAGGCCTACCACCCATAACAGGATTTTTA CCAAAATGATTAATTCTACAAGAACTAATCTACCAACACCAAACACAAATGGCCACTCTAGCATCCTTAT CCACCTTGCTCAGCCTCTTCTTTTATCTCCGCCTAGTATTCAACGCATTTCTAACCACTCCACCAAACAC CTCAAATGTGACAAAAAACTGACGAAACCAAACCAACCACCACATTTTACTCCCACAAATAATAATCTTG TCCTTAATATTACTTATTATTACCCCACTAGTTATTAGCCTATTTTAAGAAATTTAGGATATATAAACCA GGGGCCTTCAAAGCCCCAAAAAAGAGACATCTCTTAATTTCTGAGGAAACCTGAAAGATTCTTACTTTCA TAGCCTTAATGCAACTAAGACACTTTTATTAAGATAAGGCTTCCTAGATGAGCAGGCCTCGATCCTACAA ACTCTTAGTTAACAGCTAAACACCTTAAACAACAGGCTTCCATCTACTAAGCCTGGACTATATTTCTAAT CTTTCCTAAGTTTGCAGCTCAGTACTTAACAGGCCTGATAAGAAAAGGAATTAAACCTTTATAAATAGGT CTACAGCCTAACACCTGACACTCGGCCATCTTACCTTTGCCATACAAACGCTGACTCTACTCAACCAACC ACAAAGACATTGGCACCCTATATTTACTATTTGGGGCCTGAGCAGGAATAGTAGGAACCTCCCTAAGTCT ACTAATCCGAGGAGAATTAAGCTATCCAGGAACACTTATAGGAAACGACCAAATCTACAACGTAATCGTA ACAGCCCATGCTTTCACCATAATTTTTTTTATGGTAATACCAGTAATAATCGGGGGATTTGGAAACTGAC TAATTCCATTAATAATTGGAGCCCCAGACATGGCCTTCCCCCGAATAAACAACATAAGCTTTTGACTCCT CCCACCATCATTCCTTTTACTATTGACATCCGCCTGAACAGAAACTGGAGCAGGGACAGGATGAACCGTA TACCCGCCTCTAGCAGGAAACCTGGCCCACGCAGGACCAAGCGTAGACCTAACCATTTTTTCCCTACACT TGGCTGGCGTCTCTTCAATCTTAGGAGCAATTAACTTCATCACCACAATCATTAATATAAAACCCCCAAA CCAATCTCAATACCAAATACCCTTATTCATTTGATCCGTCCTAGTCACAGCAGTATTACTACTCTTATCC TTACCCGTACTAGCAGCAGGAATTACAATACTTCTAACTGACCGAAACCTAAATACTTCATTCTTTGACC CATCTGGAGGAGGAGACCCCATCCTGTACCAACACTTATTTTGATTTTTTGGCCACCCAGAAGTTTATAT CTTAATCTTACCTGGATTTGGGATAATCTCACATGTAGTAACCGACTACTCAAACAAGAAAGAACCTTTC GGATACATAGGAATAGTCTGAGCAATAATTTCAATTGGATTCCTAGGCTTTATTGTATGGGCCCACCACA TATTCACAGTCGGAATGGACGTAGACACACGCGCCTATTTTACATCTGCAACTATAATTATTGCCATCCC AACAGGCATTAAAGTATTTAGCTGACTAGCTACCCTATATGGAGGAATAATTAAATGAGAAGCAAGCATG CTCTGAGCCCTTGGTTTTATTTTCTTATTTACCGTAGGTGGATTAACTGGAATCATTCTAGCAAACTCAT CCTTAGACATTATTCTCCACGACACTTATTACGTAGTAGCGCACTTCCACTACGTACTATCTATAGGAGC AGTATTTGCAATCATGGCTGGACTAACCCATTGATTCCCCCTCCTAACAGGATATATATTACACAAAACA TGAGCAAAAGTACACTTCGCACTAACATTCATCGGAGTAAACCTAACCTTTTTCCCACAACACTTCTTAG GCCTAGCAGGAATGCCACGACGATACTCAGACTACCCAGATGCATACTCCACATGAAATACCCTATCATC TTTTGGATCACTTATCTCCTTAACAGCTATCATCATTATACTTTTTATCCTTTGAGAGGCTTTCTCTTCA AAACGAGAAGTAGACCACACAAAAATAAACTTCACAGGCTCAGAATGACTACATGGACACCCCCCACAAC TACACACCAACGAAGAACCCCCTTTTATTTACCAACCACAAGAGAGGAAGGAATTGAACCCCCTCCAACT AGTTTCAAGCTAGTTGAGCAACCACATACAATCTCTCTCAGGGACTTTAGTAAAAATTATACGTTCTTGT CATGAACGAGTTAAAGACTTAAACCCTTTAAGCCCCGCATGGCCTACCCCATACAAATTGCACTACAAAA CGCATCCTCTCCTCTAATAGAAGAACTTCTACACTTCCACGACCATGCACTAATAGTCATCCTATTAATC AGCACATCCGTGTTCTACATAATCACCATAACACTGACTACTAAACTAACACACATTAACGCAACAGACG CCCCGATCACAGAAACAGTATGAACCATCCTACCATCTATTATTCTAGTAACAATTGCCCTACCATCATT ACAAATCCTATACCTAATAGATGAGATCAACAACCCCTTTCTAACCATCAAAGCCCTTGGCCACCAATGA TACTGAAGCTATGAATACACAGACTACAAAGACCTCTCATTTGACTCCTACATAATCCTAACAAAAGAAC TAAAAAACGGACACTTCCGCCTCCTAGAAGTAGACCACCGAATAATTGTACCAACAAAATCCCCAATCCG AATTTTGGTATCAGCAGAAGATGTCCTACATTCATGAGCCGTCCCATCACTAGGAGTAAAAATCGACGCC GTACCAGGACGCCTAAATCAAACTACAATCTCAACACACCTGCCAGGCCTTTTTTACGGCCAATGCTCAG AGATTTGCGGAGCCAACCATAGCTTTATACCAATTGTTATTGAAGCTGTACCTATCTCACACTTCGAAGA CTGATCATGGGCCACAACCCAATAACCGAGAAGCTAATGCAGCACCAGCCTTTTAGCGGAGACAGGAACA CATTCTCTCTTCGTTGCAACCGAGAAGCTAATGCAGCACCAGCCTTTTAAGCTGGAGACAGGAACACATT GTTCCCTTCGTTAATGCCCCAACTAAACCCGGCCCCCTGATTATCAACAATAGTCCTAGTGTGGCTCTCA CTAGGAGTAATACACCAAAAAGTGAAACTATTCCAAAATATTTATCCCACAACCATGTGCTGCGGGGCCC CTCGTCCACCTTGACCTTGACCATGATCCCGAACCTTTTTGAAATTTTTGCCACTCCTTATTTACTAAAA ATACCCCTTATATGACTAGCGGTGATAATACCAGCAATGGTTCTTTTTACCCCCAGCCAACACCTTGTAA CAGGGCGTTACATTCTACTTAAAAAATGAACAATGAAGCAATTCACTAAACAGATTATAAACCCACTCCC AACGCAAGGCCATAAATGAACGGTGTTTTTCATGACCTTAATAATAACCCTCACATCAATAAACATGATT AGTCTACTCCCTCACACATTCACCCCAACAGCCCAATTAGCATTAACCATGGCCCTAGCCTTTCCATTAT GGATAGCCACCGTAATCATCGGGGTATTAAAAAAAACAACTCGATCACTAGCACATTTCCTCCCAGAAGG TTCCCCCACCATTCTTATCCCAGCCCTTGTGGTAGTTGAAACAATCAGCCTCTTAATTCGCCCCTTGGCA CTCGGAGTACGCCTAGCAGCTAACCTAACAGCAGGACACCTACTACTTCAACTAATAGCCCTAGCAATCA TCCACCTTCCAACACCCATATGACCGGCTACAGTGGCCGTAGCAACAACTTTAATACTACTAACCATCCT AGAAGTAGCAGTAGCACTTATTCAAGCCTATGTATTTGTACTCCTACTATCCCTGTACCTACAAGAAAAC ATCTAATGCCCACTCAAACCCACACATATCACATCGTAGAACAAAGTCCATGGCCTATTACAGGAGCAAT ATCTGCCCTATTAATAACATCAGGTCTCGCCGTATGATTTCACTATAACTCTACGACATTAATCGTTACC GGATTACTAAGCCTTCTTCTAACAATATACCAATGATGACGAGATATTATACGAGAAGGCACATTTCAAG GACACCACACCCTATTTGTACAAAAAGGGTTACGATATGGAATAATTTTGTTTATTGTCTCCGAGGTGTT CTTTTTTATTGGTTTCTTTTGAGCCTTTTATCACTCTAGCCTATCCCCCACACCAGAAATTGGAGGCCAA TGGCCGCCAACTGGGGTTTTCCCGTTAGACCCATTCGAGGTCCCCCTTCTAAACACAACCGTATTATTAG CCTCCGGGGTAACAGTCACCTGAGCACATCACTCTATCATAGAAGGGAAACGAAAATCGGCCCTTTTCTC TTTATTGTTAACCATCACCCTAGGATTATACTTCACAGCCTTACAAGCAATAGAGTATTACGAAGCCCCT TTTACAATTTCAGATAATGTTTATGGAACAACCTTTTTTGTGGCCACAGGTTTCCACGGACTCCATGTAA TTATCGGCTCCTCCTTTCTAATTGTATGCCTCCTACGACAAATCCTTCATCACTTCACCATAGACCACCA TTTTGGGTTTGAGGCAGCAGCATGATATTGACATTTCGTAGACGTAGTATGGCTATTCCTATTTACCTCA ATCTACTGATGAGGGACCTATTCTTTTAGTATTATTAGTACAAATGACTTCCAATCATTAAGTTCTAGAC AACCTAGAAAAGAATAATGAACATATTAATCCTGCTTTTAGTTATAATAATTCTCTTATCTATAGCATTA ATCACAATTAACATCTGACTCCCAAACACACAACCACATCAAGAAAAACTATCACCATACGAATGCGGCT TTGACCCTCTAATCTCCGCTCGCCTCCCATTTTCTATGCGCTTTTTCTTGGTAGCCGTCCTATTCCTTTT ATTTGATCTAGAAATTGCCCTCCTTCTACCACTACCATGAGCTGCACAATCTAACACCCCTACCGCAACC ATGACATGAACTTCCCTAATTTTAACCCTCCTAACACTCGGATTAATATATGAATGAACTCAAGGAGGAT TGGAGTGAGCCGAATGAAGAGTTAGTTCAATAAAGACAATTAACTTCGACTTAATTAATCATGGTTTAAT CCATGACTCTTCAATGCCTACCATTTTATTTAATCTGGGCTTGGCTTTTATAACAAGTATAATAGGCCTG TCATTACAACGCTCACACCTTATCTCCGCTTTATTATGCTTGGAAGGCATAATATTAACTCTTTTCCTAA TATTAACAACCTGAGCCACAGAACAGCAATCCTCCTTACTCTTTTCTGCCTTAATAATACTACTAACACT TTCTGCCTGCGGAGCGGGCACAGGCCTGTCTTTACTTGTAACTACAACTCGAACACACGGATCAAGCAAT ATAAACAACCTAAATCTCCTTCAATGCTAAAAATTATTATTCCAACAATTTTCCTTCTCCCTGTAATCCT TTTATCAAACCCCAAGTCAACATGAATAAACTTCTTCATTAATAATCTACTAATCTCCGCCACTAGTCTA ACCATCTTAAAACCACAAATCAACACGGAGTGAAAGTTCTCTAGCCCTTACACAGGACTAGATCACATTT CATCCCCACTATTAGTCCTAACAACATGACTTCTGCCACTAATAACACTAGCAAGCCAAAACTCCCTCAA AAAAGAACCATATGAGCGTAAACAACTATTCTTAATTACCTTGACACTTCTTCAGACCTTCCTACTAGGA GCCTTTTGTGCCACAGACCTGGCACTGTTTTATATCATATTCGAAGCAACGCTTATCCCCACATTAATTA TTATCACCCGATGAGGAAACCAACCAGAACGCCTTAATGCCGGAATATATTTCTTATTTTACACACTCAC AGCCTCTCTTCCGTTACTAATTGCACTACTGACTTTATATAACCTGAACAACACCCTATTAATCACAATC CTTCACTTCCTGCCCCAAAACACCAACCCACCATCAACAAGTTTCTTTCTGTGAGGTGCATGTATAATAG CATTTTTAGTAAAAATACCATTATATGGGCTCCACTTATGACTACCAAAAGCCCATGTAGAAGCTCCAAT CGCCGGCTCAATGGTCTTAGCCGCAATCCTCCTAAAATTAGGAGGATATGGCATTATTCGTACCATCACC ATGCTCACACCAATAACAAAAACCATGTCAATCCCATTTATTACTTTATCTTTATGAGGGGTGGTTATAA CAAGCCTCATTTGCCTTCGACAAACAGATTTAAAATCTCTTATCGCCTATTCATCAGTAAGCCATATGGG CCTAGTAACAGCAGCCTCCCTAATCCACACAGAATGAAGCCTAACGGGAGCCATCATTTTAATAGTAGCC CACGGCCTTGTCTCCTCAGCACTATTTTGTCTATCCAACTTTAATTATGAACGTATTAACAATCGAACAC TACTTTTAGTACGAAGCATACAACTAATTATACCCCTTCTCTCCACATGATGACTTTTGTTTAACCTATT AAACATAGCCCTCCCACCAACAATCAACCTAATAGGAGAACTACTAATTATTACGGCCATATTCAACTGA TCCCCCCCAACAATCCTTATTACAGGAGCTGGCGTAGTGTTAACAGCCTGCTACTCATTACACATATTCT TAACCACACAACATAGCAAGTTCTCTAACCACCTGGCATCCATACAAATAACAAACACACGAGAACACCT ATTAATAAGCCTTCACATAATTCCAATAGTTCTCCTAATATTCAAACCAGAACTAGTATGATCTGGCACG TATTAACCAGATACCCTGACCGCCCGCAAGGAACCACGAGACTGACCCCGAGTCAACTCTAAAACAACAA ACAAAGCTACTAACAACACCCAACCAGAAACCACAAGCACAGAACACCCAAAATCATACAAAATCGCAAC CCCCCCAAAATCCCCACGAATCAAAGAAATACCACCAAAATCAACTGTCTCTTCCCCAACCCCCTTTTTA CTTAACCCCCAAGAAAACCCAGACCCAACAAAAACTAGCAAAGATAAAAAAACCACAAGATTAACAGCAA CTGAACGACTGCCTCAAGCCTCAGGATAAAAATCGGCAGCCAAAGCAACAGAATAAGCAAACACTACTAA CATACCACCCGAATAAATCAAAAACAAAATGACAGACAAAAAAGAACTACCAACACCAACCAAAAATCCA CCACCAACAGCAGAAGCTATCAAAAGCCCTAACACCCCATAATAGGGCGAAGGATTAGAAGCCACTAATA ACAAACCAAAGACGAAACAAAGACCAAACAGAAAAATAGCATAAGTCATTATTCTCACCAAGACTCAAAC TCGGAATAGCGGCTTGAAAAACCGCCGTTATGTTTAACTATAAAAATGCAGGCGGCACGCCGCCTTATAT TATATATACTATACTCTAGTACGTCCTTCCCCCCTCCCTATGTATATCGTGCATTCCTTCTCGACCTCAC GAGTAATCATACTCCATTGACTTTCTATTGATTCTACATATTAGTGAGAGATAAGCAACCCTTGAATGTA AGATTAATCATTACTAGCTTCACGCGCATAATATCCTATTCCACATACTTTTCTTTTCAAAATACCTCTG GTTACTCTTTCCAGTGCTTACGGATCTTCCCTCCCGCAACTCTTGATATTAAGAATACCTCTGGTTGCAC TCGAGATTTAAAGACACGTTCTGTCACAAATAAGTAACTTATAGTCTGCAAAACATTTGGTACTTTTTTA AAATATATCCTTTCAACCACATATCCAGTTATGTCTATACCATCCTGTATAGGGTCGGGCATATTAATGC ATGGGTGTGTAACGGACATAGACAATTCCAAGAGGCTATTTAATTAATGCTTGTTAGACATAATACTACA TATATTTCCCCCTTCTTAACAAAAATTTTACCATTAACTTTAAAATATTTTATTATAACTTAGTTTTTTC TGCTAAACCCCCCTTACCCCCCACGAACATAGATTAGCTAACTTTATTCTTGTTAAACCCCTAAACCAAG AGTCAACTAAACTGAGTTTGTTCGTAGGAAAACTTTTTTTCCCCCCACTTTTTTTTAAATTGATAAACAA TTTATAAAATCCTATACTAAGGAGGCCTTATGTATTTTTAAATTTAAACCCTAATTTTTTAATGTATTTT TTTTATCCTGCCAGGGCCACGGAACTTCACGCTTTTAGAGGGGAGGAACCCCACCGGCTTTAGGAGCCGG CCATTCTTGGCCAAACCCAAGTGGAAGCTATGATCGAAACCATTCGAAAACACCACCCAATTATTAAAGT CCTAAATCATGCCTTTATTGACCTACCATCCCCATCCAACATCTCCGCATGATGAAACTTTGGCTCTCTC CTAGGATTATGTTTAATTATTCAGCTAATCACTGGAGTGTTTTTAGCCATACATTACACCGCCGACGTAT CACTAGCATTCTCTTCAATCTCACATATTTGCCGGAATGTAAACTACGGTTGACTAATCCGCAATATACA TGCAAACGGAGCTTCATTGTTTTTCATCTGCCTATACCTTCATGCAACCCGAGGCCTTTATTACGGATCC TACCTCTACAAAGAAACATGAAATATTGGAGTTATCTTACTACTAACCACTATAGCAACAGCATTCGTAG GATATGTCCTCCCATGAGGACAAATATCCTTCTGAGGAGCAACAGTAATCACAAACCTCTTGTCCGCCAT ACCATATGTAGGAGGGACACTTGTAAATTGAATCTGAGGAGGCTTCTCAATTGACAACGCCACACTAACC CGATTTTTTACCTTTCACTTCCTGCTCCCATTCGTAATCATGGGCTTAAGCATTATACACTTAGTATTCC TCCACGAAACAGGATCGAACAACCCAACAGGAATAAACTCCAACTCAGACAAAATCCCATTCCACCCCTA CTTTTCCTACAAGGACCTGCTAGGAGCACTAATAATATTAACAGCATTACTAACCCTCACACTTTTATAC CCAAACCTATTAGGAGACCCGGAAAATTTCACCCCAGCAAACCCACTTACTACTCCCCCCCACATTAAGC CAGAGTGATATTTTTTATTCGCTTATGCCATCCTCCGATCTATTCCTAATAAAATGGGAGGGGTGTTGGC CTTAGTACTCTCAATCTTAATCCTCCTCATCATACCCCTGGTCCACACATCCAAACAACGAAGCTCAATA CACCGCCCAATCAGTAAAATATTATTCTGATACTTAATCTCCACTATTTTCATCCTCACATGAATTGGGG GACAACCAGTAGAACCCCCATTCATCTTAATCGGCCAAATAGCCTCAGTAATTTACTTCCTGATTATTAC AGTCCTAATTCCTATCACTGGCACCATAGAAAATAAAATATTAAACTGATAGTCTCGCTCAAGAAAAGAG GATCTTTCCCCTATCCCCGGCTCCCAGAACCGGAGTTTTAAATAAACTATTTCTTGACATCACAAACCTC TACCGACCGGAGTGGGAAAAAAGTGATTGCTAATCACTAAAATCAGGGTTAAACACCTGACCCCCTCATA GGTGCAGGCGGCACGCCGCCTTATATTATATATACTATACTCTAGTACGTCCTTCCCCCCTCCCTATGTA TATCGTGCATTCCTTCTCGACCTCACGAGTAATCATACTCCATTGACTTTCTATTGATTCTACATATTAG TGAGAGATAAGCAACCCTTGAATGTAAGATTAATCATTACTAGCTTCACGCGCATAATATCCTATTCCAC ATACTTTTCTTTTCAAAATACCTCTGGTTACTCTTTCCAGTGCTTACGGATCTTCCCTCCCGCAACTCTT GATATTAAGAATACCTCTGGTTGCACTCGAGATTTAAAGACACGTTCTGTCACAAATAAGTAACTTATAG TCTGCAAAACATTTGGTACTTTTTTAAAATATATCCTTTCAACCACATATCCAGTTATGTCTATACCATC CTGTATAGGGTCGGGCATATTAATGCATGGGTGTGTAACGGACATAGACAATTCCAAGAGGCTATTTAAT TAATGCTTGTTAGACATAATACTACATATATTTCCCCCTTCTTAACAAAAATTTTACCATTAACTTTAAA ATATTTTATTATAACTTAGTTTTTTCTGCTAAACCCCCCTTACCCCCCACGAACATAGATTAGCTAACTT TATTCTTGTTAAACCCCTAAACCAAGAGTCAACTAAACTGAGTTTGTTCGTAGGAAAACTTTTTTTCCCC CCACTTTTTTTTAAATTGATAAACAATTTATAAAATCCTATACTAAGGAAGCCTTATGCATTTTTAAACA TTAAATCTTATTTTTTTTACATTATTTTTACCAAAAATAAAGCATTTTTACATAAAATACAAGGGCCCGT ACCTACAACCACACCATGCACAATTTATTTCTTTTTTCCATAAAAATAAAGCACTGGAAATGCCTCTTAC CATTTACAATAAAAGTCATCGTAGCTTAAAATATTAAAGCCTGGCCTTGAAGATGCCATTATAGGACTTG ATGCCTCAATGACACAAAGATTTGGTCATAAACTTACTGTTACTTAACTCTTAAATTACACATGCAAGTA TCAGCACACCAGTGAAAATGCCCTTAAAACAATCACCAAAGGAGCCGGCATCAGGCACACCAAAGTGGCC AAAGACGCCTTGCCTCGCCACACCCCCAAGGGTACACAGCAGTGATTAATATTAAGCCATAAGTGAAAAC TTGACTTAGTTATAGAGACCACGGCCGGTCAATTTCGTGCCAGCCACCGCGGTTAAACGAATTTTAGGCC GAAAGTAAGAGCCAAACGGCGTAAAAGTAACTAAATCACCACCCCTTCACTAAACCCAAGAAAAAACTAA GATGAGTTGTAAAACCTCTACATGAAGATGTCTTGGGGCCAAGATAAAATTGAACTTACTAAAATTAAGG GTCAAACTGGGATTAGATCCCCACTATGCTTAATCCTAAACATCGACACCTAAACATACAAGGGTGTTCG CCCGGGAACTACCAGCAAAACGCTAGAAACCCTAAAGACTTGACGGTGCCCCAAAACCCCCTAGAGGAGC CTGTTCTATAATTGATGATCCGCAATAAACCTCACCATTTTTCGCCCCCAGCCTATATACCGCCGTCGCC AGTCTACCTTGTGAAAGAACTAAGTAGGTCAAACAGCATTACCGCTAATACGTCAGGTCAAGGTGCAGCC AATAAAATGGAAAGAAATGGGCTACATTCCCACAAAACCGGGAAATACTAAAAGTTAAAATGAAAAAATA ACAAGAAGGTGGATTTAGTAGTAAACTAGAACCATAATATCAAGTTGAAAAAGGCTCTGGAGCGCGTACA CACCGCCCGTCACCCTCCTATTAAACCAAAAGGAGGCAAGTCGTAACACGGTAAGCATACTGGAAAGTGT GCTTGGAAACAAAATGTAGCTTATTATAAAGCCCTCAGCCTACACCTGAACAATGTTAGCCCACCTAACC ATTTTGAACCTTAAACTAGCCCGCTACCCAGATAATCTAAAACCAATTCACTAACCCAAAACATTTTTAC GAGCTAAGTATAGGAGATAGAAAAGAACCCCAGGAGCTATAGAGACAGTACCGCAAGGGAAAGTTTAAAA TACCAAGTTAAATAAAGCAAAGATAGACCCTTGTACCTTTTGAATAATGGTTTAACTAGTCCAAACAAGC TAAAAGAGCTAAGCTTTTTACCCCGAAATCAAGTGAGCTACTTATAAGCGTACAGAAATAATTCGGCTCT GTGGCAAAAGAGCGAAAAGACTAATAAGTAGAGGCGAAACACCTACCGAACATGAAGATAGCTGGTTACT TATTAAACGAATCTAAGTTCTACCTTAACTCACCCAACCCTCCTTAAACAAAGAGAAATGAAAGATTTAA GAGATATTTAATAGGGGTACAGCCCTATTAAAATAGGAAACAGCCTATACAAGAGGAAAGAGAATTACAC CAAACCGTAGGCCTTAAAGCAGCCACCAAAATATAAAGCGTTAAAGCTAATTAACACCAACACCAACCTT TTTAATCCAACCCTAAACAACAATAAGTCATACTATAATAATATAACAGAATTAATGTTAAAATGAGTAA CAAGAAAAAGATTTCTCCGTGCATCCGCATAAGCCAGACTAGACAACCTACTGGTCATTACACAATAATT ATATTTACACAACGAACAATAATATTAATCTAACTGTTAACCCAACACAGGCATGCACCTAGGAAAGATT AAACTCACCAGAAGGAACTCGGAACACCGGGCCCCGACTGTTTACCAAAAACATAACCTTTAGCTAATCA AGTATTAAAGGCGCCTCCTGCCCAATGAAAATTAAACGGCCGCGGTATTCTGACCGTGCAAAGGTAGCGT AATCATTGTCTCCTAAATGAAGACTAGTATGACGGAGAAACGAGGGCCCAACTGTCTCCTGGCGAAAATC AGTGAAATTGATCCCCTTGTGCAAAAGCAAGGATAAAACCATAAGACGATAAGACCCCGTGGAGCTTAAA CATCAGAGTCAATTATACATGTTGAATCCACCAGGAATAAAATCAAAAAATGACCCCCTCTGTTTTGGCT GGGGCGGCCTCGGAATAAAAAAAAACTTCCGAAAACCTCATTTAGACCAACAAGTCAAAACATAAAATAC TTGACCCAATATTATTGATTATTGAACCAAGTTACCCCAGGGATAACAGCGCCATCCCCTTCGAGAGCCC ATATCGACAAGGGAGATTACGACCTCGATGTTGGATCAGGACATCCTAGTGGTGCAACCGCTACTAAGGG TTCGTTTGTTCAACGATTAACAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTA TCTATGACATACTATTTCCAGTACGAAAGGATCGAAACAGTAGGGCATAACCGCAAGCAAGCCCTGCCCT TAATTAATGAAACAAAATAAATTAATTAACTGGGATCTCCCCCACGCCCTAAACCAGGGCT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions