Viewing data for Mugil cephalus


Scientific name Mugil cephalus
Common name Striped mullet
Maximum lifespan 16.00 years (Mugil cephalus@AnAge)

Total mtDNA (size: 16685 bases) GC AT G C A T
Base content (bases) 7520 9165 4941 2579 4469 4696
Base content per 1 kb (bases) 451 549 296 155 268 281
Base content (%) 45.1% 54.9%
Total protein-coding genes (size: 11444 bases) GC AT G C A T
Base content (bases) 5264 6180 3645 1619 3183 2997
Base content per 1 kb (bases) 460 540 319 141 278 262
Base content (%) 46.0% 54.0%
D-loop (size: 884 bases) GC AT G C A T
Base content (bases) 280 604 167 113 286 318
Base content per 1 kb (bases) 317 683 189 128 324 360
Base content (%) 31.7% 68.3%
Total tRNA-coding genes (size: 1560 bases) GC AT G C A T
Base content (bases) 699 861 392 307 379 482
Base content per 1 kb (bases) 448 552 251 197 243 309
Base content (%) 44.8% 55.2%
Total rRNA-coding genes (size: 2676 bases) GC AT G C A T
Base content (bases) 1219 1457 693 526 592 865
Base content per 1 kb (bases) 456 544 259 197 221 323
Base content (%) 45.6% 54.4%
12S rRNA gene (size: 958 bases) GC AT G C A T
Base content (bases) 455 503 255 200 214 289
Base content per 1 kb (bases) 475 525 266 209 223 302
Base content (%) 47.5% 52.5%
16S rRNA gene (size: 1718 bases) GC AT G C A T
Base content (bases) 764 954 438 326 378 576
Base content per 1 kb (bases) 445 555 255 190 220 335
Base content (%) 44.5% 55.5%

ATP6 (size: 683 bases) GC AT G C A T
Base content (bases) 305 378 227 78 195 183
Base content per 1 kb (bases) 447 553 332 114 286 268
Base content (%) 44.7% 55.3%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 74 94 56 18 40 54
Base content per 1 kb (bases) 440 560 333 107 238 321
Base content (%) 44.0% 56.0%
COX1 (size: 1569 bases) GC AT G C A T
Base content (bases) 705 864 420 285 482 382
Base content per 1 kb (bases) 449 551 268 182 307 243
Base content (%) 44.9% 55.1%
COX2 (size: 691 bases) GC AT G C A T
Base content (bases) 289 402 185 104 207 195
Base content per 1 kb (bases) 418 582 268 151 300 282
Base content (%) 41.8% 58.2%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 362 422 237 125 216 206
Base content per 1 kb (bases) 462 538 302 159 276 263
Base content (%) 46.2% 53.8%
CYTB (size: 1138 bases) GC AT G C A T
Base content (bases) 530 608 359 171 328 280
Base content per 1 kb (bases) 466 534 315 150 288 246
Base content (%) 46.6% 53.4%
ND1 (size: 969 bases) GC AT G C A T
Base content (bases) 439 530 313 126 279 251
Base content per 1 kb (bases) 453 547 323 130 288 259
Base content (%) 45.3% 54.7%
ND2 (size: 1072 bases) GC AT G C A T
Base content (bases) 515 557 393 122 274 283
Base content per 1 kb (bases) 480 520 367 114 256 264
Base content (%) 48.0% 52.0%
ND3 (size: 349 bases) GC AT G C A T
Base content (bases) 169 180 118 51 105 75
Base content per 1 kb (bases) 484 516 338 146 301 215
Base content (%) 48.4% 51.6%
ND4 (size: 1381 bases) GC AT G C A T
Base content (bases) 638 743 455 183 386 357
Base content per 1 kb (bases) 462 538 329 133 280 259
Base content (%) 46.2% 53.8%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 151 146 106 45 80 66
Base content per 1 kb (bases) 508 492 357 152 269 222
Base content (%) 50.8% 49.2%
ND5 (size: 1842 bases) GC AT G C A T
Base content (bases) 835 1007 593 242 507 500
Base content per 1 kb (bases) 453 547 322 131 275 271
Base content (%) 45.3% 54.7%
ND6 (size: 522 bases) GC AT G C A T
Base content (bases) 257 265 186 71 90 175
Base content per 1 kb (bases) 492 508 356 136 172 335
Base content (%) 49.2% 50.8%

ATP6 (size: 683 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.54%)
Alanine (Ala, A)
n = 18 (7.96%)
Serine (Ser, S)
n = 9 (3.98%)
Threonine (Thr, T)
n = 20 (8.85%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (4.87%)
Leucine (Leu, L)
n = 58 (25.66%)
Isoleucine (Ile, I)
n = 18 (7.96%)
Methionine (Met, M)
n = 9 (3.98%)
Proline (Pro, P)
n = 17 (7.52%)
Phenylalanine (Phe, F)
n = 15 (6.64%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 5 (2.21%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 10 (4.42%)
Glutamine (Gln, Q)
n = 10 (4.42%)
Histidine (His, H)
n = 4 (1.77%)
Lysine (Lys, K)
n = 2 (0.88%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 9 7 12 12 21 4 8 8 2 2 5 3 1 6 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 5 7 6 0 2 3 3 0 2 11 4 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 9 1 0 3 1 0 2 3 1 2 1 1 2 8 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 3 1 0 1 2 0 0 0 5 0 0 0 0 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
42 85 64 36
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 59 34 111
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 83 84 47
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPAPWLLILIFSWLIFLTIIPPKILSHTSPNEPAHQSAEKPKTEVWTWPWY*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (5.45%)
Serine (Ser, S)
n = 4 (7.27%)
Threonine (Thr, T)
n = 4 (7.27%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.82%)
Leucine (Leu, L)
n = 7 (12.73%)
Isoleucine (Ile, I)
n = 6 (10.91%)
Methionine (Met, M)
n = 1 (1.82%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 2 (3.64%)
Tyrosine (Tyr, Y)
n = 1 (1.82%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.45%)
Asparagine (Asn, N)
n = 2 (3.64%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 3 0 2 1 2 0 2 2 0 0 1 0 0 0 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 2 0 0 0 0 0 2 2 4 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 0 0 0 2 0 0 0 2 0 1 2 0 0 2 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 3 0 0 0 3 0 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
7 18 18 13
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
7 18 14 17
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 20 22 10
COX1 (size: 1569 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.0%)
Alanine (Ala, A)
n = 45 (8.62%)
Serine (Ser, S)
n = 32 (6.13%)
Threonine (Thr, T)
n = 35 (6.7%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 42 (8.05%)
Leucine (Leu, L)
n = 64 (12.26%)
Isoleucine (Ile, I)
n = 39 (7.47%)
Methionine (Met, M)
n = 24 (4.6%)
Proline (Pro, P)
n = 30 (5.75%)
Phenylalanine (Phe, F)
n = 42 (8.05%)
Tyrosine (Tyr, Y)
n = 18 (3.45%)
Tryptophan (Trp, W)
n = 17 (3.26%)
Aspartic acid (Asp, D)
n = 14 (2.68%)
Glutamic acid (Glu, E)
n = 11 (2.11%)
Asparagine (Asn, N)
n = 14 (2.68%)
Glutamine (Gln, Q)
n = 7 (1.34%)
Histidine (His, H)
n = 19 (3.64%)
Lysine (Lys, K)
n = 11 (2.11%)
Arginine (Arg, R)
n = 10 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
24 15 13 16 11 18 5 12 5 2 9 13 16 4 15 27
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
11 0 1 18 16 9 2 9 14 14 10 10 10 10 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 16 1 8 11 5 3 1 4 8 10 3 2 11 3 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 10 1 3 11 9 2 3 0 7 0 0 0 1 0 14
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
159 116 128 120
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
80 137 95 211
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
46 167 159 151
COX2 (size: 691 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.49%)
Alanine (Ala, A)
n = 17 (7.42%)
Serine (Ser, S)
n = 18 (7.86%)
Threonine (Thr, T)
n = 9 (3.93%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 20 (8.73%)
Leucine (Leu, L)
n = 28 (12.23%)
Isoleucine (Ile, I)
n = 20 (8.73%)
Methionine (Met, M)
n = 10 (4.37%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 11 (4.8%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 14 (6.11%)
Asparagine (Asn, N)
n = 5 (2.18%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 9 (3.93%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 7 9 13 1 4 1 9 6 2 5 8 6 1 6 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 2 4 8 5 0 2 2 4 0 2 5 7 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 4 0 5 5 4 0 0 4 5 4 0 0 3 2 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 12 2 2 11 4 0 2 2 2 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
72 56 52 50
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 54 62 89
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 75 81 67
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 22 (8.46%)
Serine (Ser, S)
n = 14 (5.38%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 30 (11.54%)
Isoleucine (Ile, I)
n = 17 (6.54%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 3 (1.15%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 6 (2.31%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 9 7 4 9 11 3 3 8 0 3 4 8 0 11 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 1 4 9 9 0 1 9 9 2 3 6 3 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 9 1 3 5 3 0 0 3 3 9 1 0 1 2 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 8 1 2 2 2 0 0 0 5 1 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
71 69 56 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 68 54 95
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 100 96 55
CYTB (size: 1138 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.35%)
Alanine (Ala, A)
n = 32 (8.47%)
Serine (Ser, S)
n = 26 (6.88%)
Threonine (Thr, T)
n = 22 (5.82%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 24 (6.35%)
Leucine (Leu, L)
n = 61 (16.14%)
Isoleucine (Ile, I)
n = 31 (8.2%)
Methionine (Met, M)
n = 11 (2.91%)
Proline (Pro, P)
n = 22 (5.82%)
Phenylalanine (Phe, F)
n = 29 (7.67%)
Tyrosine (Tyr, Y)
n = 15 (3.97%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 8 (2.12%)
Glutamic acid (Glu, E)
n = 7 (1.85%)
Asparagine (Asn, N)
n = 17 (4.5%)
Glutamine (Gln, Q)
n = 5 (1.32%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.38%)
Arginine (Arg, R)
n = 8 (2.12%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 15 7 11 24 13 5 7 5 0 3 10 9 2 14 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 4 7 12 10 3 2 8 12 2 5 8 9 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 8 0 6 8 8 1 0 3 4 11 2 1 3 14 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 6 1 2 6 6 3 1 2 4 1 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
95 100 93 91
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
51 99 73 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
25 160 114 80
ND1 (size: 969 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.59%)
Alanine (Ala, A)
n = 32 (9.94%)
Serine (Ser, S)
n = 22 (6.83%)
Threonine (Thr, T)
n = 20 (6.21%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 16 (4.97%)
Leucine (Leu, L)
n = 69 (21.43%)
Isoleucine (Ile, I)
n = 27 (8.39%)
Methionine (Met, M)
n = 7 (2.17%)
Proline (Pro, P)
n = 25 (7.76%)
Phenylalanine (Phe, F)
n = 18 (5.59%)
Tyrosine (Tyr, Y)
n = 11 (3.42%)
Tryptophan (Trp, W)
n = 8 (2.48%)
Aspartic acid (Asp, D)
n = 4 (1.24%)
Glutamic acid (Glu, E)
n = 10 (3.11%)
Asparagine (Asn, N)
n = 10 (3.11%)
Glutamine (Gln, Q)
n = 7 (2.17%)
Histidine (His, H)
n = 2 (0.62%)
Lysine (Lys, K)
n = 7 (2.17%)
Arginine (Arg, R)
n = 8 (2.48%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 13 7 12 19 25 2 10 7 0 5 7 4 0 7 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 1 6 16 10 0 0 6 10 2 6 13 6 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
11 7 0 5 5 8 0 2 2 7 4 1 1 5 5 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 10 0 1 3 7 0 1 1 5 1 0 0 1 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
80 100 75 68
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
39 95 52 137
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 118 124 74
ND2 (size: 1072 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.06%)
Alanine (Ala, A)
n = 28 (7.87%)
Serine (Ser, S)
n = 26 (7.3%)
Threonine (Thr, T)
n = 54 (15.17%)
Cysteine (Cys, C)
n = 1 (0.28%)
Valine (Val, V)
n = 6 (1.69%)
Leucine (Leu, L)
n = 84 (23.6%)
Isoleucine (Ile, I)
n = 28 (7.87%)
Methionine (Met, M)
n = 12 (3.37%)
Proline (Pro, P)
n = 21 (5.9%)
Phenylalanine (Phe, F)
n = 11 (3.09%)
Tyrosine (Tyr, Y)
n = 7 (1.97%)
Tryptophan (Trp, W)
n = 11 (3.09%)
Aspartic acid (Asp, D)
n = 1 (0.28%)
Glutamic acid (Glu, E)
n = 5 (1.4%)
Asparagine (Asn, N)
n = 7 (1.97%)
Glutamine (Gln, Q)
n = 14 (3.93%)
Histidine (His, H)
n = 9 (2.53%)
Lysine (Lys, K)
n = 9 (2.53%)
Arginine (Arg, R)
n = 5 (1.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 14 11 18 30 22 8 4 12 2 3 1 2 0 3 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 5 18 5 0 1 8 7 2 7 8 6 0 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
26 14 2 2 10 4 1 4 5 3 4 0 2 2 5 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 4 1 0 1 8 1 1 2 2 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 127 119 53
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 120 52 141
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 146 112 79
ND3 (size: 1072 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.06%)
Alanine (Ala, A)
n = 28 (7.87%)
Serine (Ser, S)
n = 26 (7.3%)
Threonine (Thr, T)
n = 54 (15.17%)
Cysteine (Cys, C)
n = 1 (0.28%)
Valine (Val, V)
n = 6 (1.69%)
Leucine (Leu, L)
n = 84 (23.6%)
Isoleucine (Ile, I)
n = 28 (7.87%)
Methionine (Met, M)
n = 12 (3.37%)
Proline (Pro, P)
n = 21 (5.9%)
Phenylalanine (Phe, F)
n = 11 (3.09%)
Tyrosine (Tyr, Y)
n = 7 (1.97%)
Tryptophan (Trp, W)
n = 11 (3.09%)
Aspartic acid (Asp, D)
n = 1 (0.28%)
Glutamic acid (Glu, E)
n = 5 (1.4%)
Asparagine (Asn, N)
n = 7 (1.97%)
Glutamine (Gln, Q)
n = 14 (3.93%)
Histidine (His, H)
n = 9 (2.53%)
Lysine (Lys, K)
n = 9 (2.53%)
Arginine (Arg, R)
n = 5 (1.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 14 11 18 30 22 8 4 12 2 3 1 2 0 3 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 5 18 5 0 1 8 7 2 7 8 6 0 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
26 14 2 2 10 4 1 4 5 3 4 0 2 2 5 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 4 1 0 1 8 1 1 2 2 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 127 119 53
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 120 52 141
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 146 112 79
ND4 (size: 1381 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (5.66%)
Alanine (Ala, A)
n = 39 (8.5%)
Serine (Ser, S)
n = 34 (7.41%)
Threonine (Thr, T)
n = 37 (8.06%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 12 (2.61%)
Leucine (Leu, L)
n = 93 (20.26%)
Isoleucine (Ile, I)
n = 37 (8.06%)
Methionine (Met, M)
n = 26 (5.66%)
Proline (Pro, P)
n = 29 (6.32%)
Phenylalanine (Phe, F)
n = 19 (4.14%)
Tyrosine (Tyr, Y)
n = 13 (2.83%)
Tryptophan (Trp, W)
n = 18 (3.92%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 13 (2.83%)
Asparagine (Asn, N)
n = 11 (2.4%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 11 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 17 20 22 36 21 3 8 10 1 2 7 2 1 9 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 4 8 18 13 0 5 9 11 1 8 17 3 1 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 14 0 5 12 8 0 0 9 5 8 1 3 3 8 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 12 1 1 3 10 1 4 3 3 1 0 0 0 0 17
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
94 144 131 91
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
69 130 74 187
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 181 152 107
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 6 (6.12%)
Alanine (Ala, A)
n = 13 (13.27%)
Serine (Ser, S)
n = 11 (11.22%)
Threonine (Thr, T)
n = 7 (7.14%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 3 (3.06%)
Methionine (Met, M)
n = 5 (5.1%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 3 (3.06%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 3 (3.06%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 1 4 3 6 8 3 3 1 1 1 1 0 0 2 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 2 1 2 8 3 0 1 3 2 0 1 1 0 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 0 0 0 4 4 0 0 3 0 0 0 0 0 3 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 0 0 1 1 0 0 2 1 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
24 30 22 23
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
16 30 13 40
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 46 31 17
ND5 (size: 1842 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 32 (5.22%)
Alanine (Ala, A)
n = 57 (9.3%)
Serine (Ser, S)
n = 44 (7.18%)
Threonine (Thr, T)
n = 51 (8.32%)
Cysteine (Cys, C)
n = 7 (1.14%)
Valine (Val, V)
n = 25 (4.08%)
Leucine (Leu, L)
n = 102 (16.64%)
Isoleucine (Ile, I)
n = 47 (7.67%)
Methionine (Met, M)
n = 22 (3.59%)
Proline (Pro, P)
n = 28 (4.57%)
Phenylalanine (Phe, F)
n = 44 (7.18%)
Tyrosine (Tyr, Y)
n = 18 (2.94%)
Tryptophan (Trp, W)
n = 14 (2.28%)
Aspartic acid (Asp, D)
n = 12 (1.96%)
Glutamic acid (Glu, E)
n = 13 (2.12%)
Asparagine (Asn, N)
n = 25 (4.08%)
Glutamine (Gln, Q)
n = 21 (3.43%)
Histidine (His, H)
n = 16 (2.61%)
Lysine (Lys, K)
n = 21 (3.43%)
Arginine (Arg, R)
n = 14 (2.28%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
27 20 17 18 29 36 5 14 19 2 8 9 8 0 10 34
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 2 5 11 29 16 1 8 10 11 3 11 9 8 0 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
23 15 1 7 21 4 2 1 9 5 13 3 0 8 17 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
16 12 1 5 7 20 1 2 5 5 2 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
139 167 176 132
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 170 127 240
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
26 256 197 135
ND6 (size: 522 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 32 (18.5%)
Alanine (Ala, A)
n = 16 (9.25%)
Serine (Ser, S)
n = 10 (5.78%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 3 (1.73%)
Valine (Val, V)
n = 21 (12.14%)
Leucine (Leu, L)
n = 30 (17.34%)
Isoleucine (Ile, I)
n = 7 (4.05%)
Methionine (Met, M)
n = 11 (6.36%)
Proline (Pro, P)
n = 5 (2.89%)
Phenylalanine (Phe, F)
n = 7 (4.05%)
Tyrosine (Tyr, Y)
n = 7 (4.05%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 2 (1.16%)
Glutamic acid (Glu, E)
n = 5 (2.89%)
Asparagine (Asn, N)
n = 2 (1.16%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 4 (2.31%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 0 5 2 0 3 5 13 0 0 4 3 5 9 4 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 2 1 9 0 4 3 5 2 5 20 2 0 3 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 0 2 2 2 3 1 2 0 3 4 4 7 2 0 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 3 2 0 0 0 0 0 1 3 0 0 0 1 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
76 20 27 51
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
46 34 18 76
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
64 17 45 48
Total protein-coding genes (size: 11465 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 246 (6.44%)
Alanine (Ala, A)
n = 328 (8.59%)
Serine (Ser, S)
n = 257 (6.73%)
Threonine (Thr, T)
n = 296 (7.75%)
Cysteine (Cys, C)
n = 31 (0.81%)
Valine (Val, V)
n = 199 (5.21%)
Leucine (Leu, L)
n = 680 (17.81%)
Isoleucine (Ile, I)
n = 287 (7.52%)
Methionine (Met, M)
n = 149 (3.9%)
Proline (Pro, P)
n = 223 (5.84%)
Phenylalanine (Phe, F)
n = 238 (6.23%)
Tyrosine (Tyr, Y)
n = 116 (3.04%)
Tryptophan (Trp, W)
n = 118 (3.09%)
Aspartic acid (Asp, D)
n = 68 (1.78%)
Glutamic acid (Glu, E)
n = 102 (2.67%)
Asparagine (Asn, N)
n = 110 (2.88%)
Glutamine (Gln, Q)
n = 98 (2.57%)
Histidine (His, H)
n = 104 (2.72%)
Lysine (Lys, K)
n = 81 (2.12%)
Arginine (Arg, R)
n = 82 (2.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
160 127 108 137 190 190 47 98 86 12 45 72 64 18 91 147
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
41 10 21 81 146 92 9 36 75 93 42 64 92 64 3 61
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
127 100 8 44 93 53 8 12 47 44 72 19 18 40 70 33
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
71 88 14 19 49 73 8 14 18 41 9 0 0 5 1 99
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
943 1071 982 823
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
536 1045 685 1553
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
257 1417 1254 891 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​M​u​g​i​l​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ c​e​p​h​a​l​u​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.