Viewing data for Ictidomys tridecemlineatus
| Scientific name | Ictidomys tridecemlineatus |
| Common name | Thirteen-lined ground squirrel |
| Maximum lifespan | 7.90 years (Ictidomys tridecemlineatus@AnAge) |
| Total mtDNA (size: 16458 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5977 | 10481 | 3878 | 2099 | 5201 | 5280 |
| Base content per 1 kb (bases) | 363 | 637 | 236 | 128 | 316 | 321 |
| Base content (%) | 36.3% | 63.7% | ||||
| Total protein-coding genes (size: 11330 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4128 | 7202 | 2817 | 1311 | 3701 | 3501 |
| Base content per 1 kb (bases) | 364 | 636 | 249 | 116 | 327 | 309 |
| Base content (%) | 36.4% | 63.6% | ||||
| D-loop (size: 1016 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 376 | 640 | 250 | 126 | 326 | 314 |
| Base content per 1 kb (bases) | 370 | 630 | 246 | 124 | 321 | 309 |
| Base content (%) | 37.0% | 63.0% | ||||
| Total tRNA-coding genes (size: 1508 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 516 | 992 | 292 | 224 | 465 | 527 |
| Base content per 1 kb (bases) | 342 | 658 | 194 | 149 | 308 | 349 |
| Base content (%) | 34.2% | 65.8% | ||||
| Total rRNA-coding genes (size: 2529 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 927 | 1602 | 501 | 426 | 690 | 912 |
| Base content per 1 kb (bases) | 367 | 633 | 198 | 168 | 273 | 361 |
| Base content (%) | 36.7% | 63.3% | ||||
| 12S rRNA gene (size: 964 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 366 | 598 | 198 | 168 | 257 | 341 |
| Base content per 1 kb (bases) | 380 | 620 | 205 | 174 | 267 | 354 |
| Base content (%) | 38.0% | 62.0% | ||||
| 16S rRNA gene (size: 1565 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 561 | 1004 | 303 | 258 | 433 | 571 |
| Base content per 1 kb (bases) | 358 | 642 | 194 | 165 | 277 | 365 |
| Base content (%) | 35.8% | 64.2% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 239 | 442 | 170 | 69 | 237 | 205 |
| Base content per 1 kb (bases) | 351 | 649 | 250 | 101 | 348 | 301 |
| Base content (%) | 35.1% | 64.9% | ||||
| ATP8 (size: 207 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 66 | 141 | 52 | 14 | 69 | 72 |
| Base content per 1 kb (bases) | 319 | 681 | 251 | 68 | 333 | 348 |
| Base content (%) | 31.9% | 68.1% | ||||
| COX1 (size: 1542 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 577 | 965 | 333 | 244 | 531 | 434 |
| Base content per 1 kb (bases) | 374 | 626 | 216 | 158 | 344 | 281 |
| Base content (%) | 37.4% | 62.6% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 260 | 424 | 169 | 91 | 209 | 215 |
| Base content per 1 kb (bases) | 380 | 620 | 247 | 133 | 306 | 314 |
| Base content (%) | 38.0% | 62.0% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 320 | 464 | 202 | 118 | 248 | 216 |
| Base content per 1 kb (bases) | 408 | 592 | 258 | 151 | 316 | 276 |
| Base content (%) | 40.8% | 59.2% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 454 | 686 | 306 | 148 | 369 | 317 |
| Base content per 1 kb (bases) | 398 | 602 | 268 | 130 | 324 | 278 |
| Base content (%) | 39.8% | 60.2% | ||||
| ND1 (size: 956 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 344 | 612 | 239 | 105 | 314 | 298 |
| Base content per 1 kb (bases) | 360 | 640 | 250 | 110 | 328 | 312 |
| Base content (%) | 36.0% | 64.0% | ||||
| ND2 (size: 1042 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 364 | 678 | 274 | 90 | 316 | 362 |
| Base content per 1 kb (bases) | 349 | 651 | 263 | 86 | 303 | 347 |
| Base content (%) | 34.9% | 65.1% | ||||
| ND3 (size: 347 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 126 | 221 | 83 | 43 | 125 | 96 |
| Base content per 1 kb (bases) | 363 | 637 | 239 | 124 | 360 | 277 |
| Base content (%) | 36.3% | 63.7% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 477 | 901 | 333 | 144 | 468 | 433 |
| Base content per 1 kb (bases) | 346 | 654 | 242 | 104 | 340 | 314 |
| Base content (%) | 34.6% | 65.4% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 96 | 201 | 63 | 33 | 116 | 85 |
| Base content per 1 kb (bases) | 323 | 677 | 212 | 111 | 391 | 286 |
| Base content (%) | 32.3% | 67.7% | ||||
| ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 648 | 1170 | 466 | 182 | 590 | 580 |
| Base content per 1 kb (bases) | 356 | 644 | 256 | 100 | 325 | 319 |
| Base content (%) | 35.6% | 64.4% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 182 | 343 | 145 | 37 | 133 | 210 |
| Base content per 1 kb (bases) | 347 | 653 | 276 | 70 | 253 | 400 |
| Base content (%) | 34.7% | 65.3% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%) 
Alanine (Ala, A)
n = 16 (7.08%) 
Serine (Ser, S)
n = 13 (5.75%) 
Threonine (Thr, T)
n = 21 (9.29%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 10 (4.42%) 
Leucine (Leu, L)
n = 44 (19.47%) 
Isoleucine (Ile, I)
n = 24 (10.62%) 
Methionine (Met, M)
n = 15 (6.64%) 
Proline (Pro, P)
n = 16 (7.08%) 
Phenylalanine (Phe, F)
n = 13 (5.75%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 10 (4.42%) 
Glutamine (Gln, Q)
n = 8 (3.54%) 
Histidine (His, H)
n = 7 (3.1%) 
Lysine (Lys, K)
n = 4 (1.77%) 
Arginine (Arg, R)
n = 5 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 3 | 11 | 13 | 6 | 10 | 0 | 15 | 8 | 0 | 2 | 2 | 6 | 0 | 9 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 0 | 4 | 5 | 7 | 0 | 2 | 2 | 7 | 0 | 12 | 2 | 2 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 9 | 0 | 3 | 1 | 6 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 4 | 6 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 2 | 1 | 1 | 0 | 3 | 1 | 3 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 65 | 77 | 44 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 22 | 63 | 36 | 106 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 42 | 92 | 87 | ||||||||||||
| ATP8 (size: 207 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITILSMILALFFMFQLKISNHSYPSNPSLKYTKLIEHKTPWEEKWTKIYLPLSLPLHL* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.47%)
Serine (Ser, S)
n = 7 (10.29%)
Threonine (Thr, T)
n = 6 (8.82%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 12 (17.65%)
Isoleucine (Ile, I)
n = 6 (8.82%)
Methionine (Met, M)
n = 3 (4.41%)
Proline (Pro, P)
n = 6 (8.82%)
Phenylalanine (Phe, F)
n = 4 (5.88%)
Tyrosine (Tyr, Y)
n = 3 (4.41%)
Tryptophan (Trp, W)
n = 3 (4.41%)
Aspartic acid (Asp, D)
n = 1 (1.47%)
Glutamic acid (Glu, E)
n = 3 (4.41%)
Asparagine (Asn, N)
n = 2 (2.94%)
Glutamine (Gln, Q)
n = 2 (2.94%)
Histidine (His, H)
n = 3 (4.41%)
Lysine (Lys, K)
n = 6 (8.82%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 3 | 1 | 4 | 0 | 5 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 0 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 3 | 1 | 3 | 1 | 3 | 0 | 0 | 0 | 3 | 0 | 0 | 1 | 2 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 0 | 0 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 20 | 23 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 20 | 21 | 25 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 12 | 28 | 23 | ||||||||||||
| COX1 (size: 1542 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.16%)
Alanine (Ala, A)
n = 42 (8.19%)
Serine (Ser, S)
n = 30 (5.85%)
Threonine (Thr, T)
n = 36 (7.02%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 37 (7.21%)
Leucine (Leu, L)
n = 59 (11.5%)
Isoleucine (Ile, I)
n = 38 (7.41%)
Methionine (Met, M)
n = 32 (6.24%)
Proline (Pro, P)
n = 29 (5.65%)
Phenylalanine (Phe, F)
n = 43 (8.38%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.51%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 29 | 9 | 28 | 16 | 8 | 17 | 2 | 14 | 6 | 0 | 13 | 4 | 19 | 1 | 26 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 1 | 18 | 6 | 16 | 2 | 11 | 4 | 30 | 2 | 15 | 3 | 10 | 1 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 15 | 1 | 9 | 8 | 10 | 0 | 1 | 2 | 12 | 7 | 0 | 2 | 11 | 6 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 8 | 2 | 11 | 4 | 9 | 0 | 4 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 151 | 104 | 135 | 124 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 134 | 95 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 95 | 204 | 198 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 21 (9.25%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 12 (5.29%)
Leucine (Leu, L)
n = 36 (15.86%)
Isoleucine (Ile, I)
n = 18 (7.93%)
Methionine (Met, M)
n = 13 (5.73%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 6 (2.64%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 13 (5.73%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 6 (2.64%)
Glutamine (Gln, Q)
n = 5 (2.2%)
Histidine (His, H)
n = 8 (3.52%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 7 | 12 | 12 | 3 | 6 | 2 | 13 | 5 | 0 | 5 | 3 | 4 | 0 | 4 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 2 | 6 | 2 | 1 | 0 | 0 | 3 | 4 | 1 | 3 | 3 | 7 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 8 | 1 | 6 | 4 | 7 | 0 | 0 | 4 | 6 | 4 | 0 | 0 | 3 | 3 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 11 | 3 | 4 | 9 | 3 | 1 | 1 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 56 | 56 | 62 | 54 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 57 | 61 | 85 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 56 | 92 | 70 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 16 (6.15%)
Serine (Ser, S)
n = 24 (9.23%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 19 (7.31%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 13 (5.0%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 4 | 7 | 7 | 6 | 13 | 0 | 9 | 7 | 0 | 5 | 3 | 10 | 1 | 13 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 4 | 8 | 4 | 0 | 4 | 7 | 7 | 2 | 2 | 3 | 5 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 11 | 1 | 6 | 3 | 9 | 1 | 2 | 3 | 6 | 4 | 0 | 0 | 5 | 2 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 1 | 1 | 3 | 2 | 0 | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 67 | 64 | 55 | 75 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 65 | 54 | 98 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 73 | 107 | 74 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 23 (6.07%)
Serine (Ser, S)
n = 25 (6.6%)
Threonine (Thr, T)
n = 25 (6.6%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 20 (5.28%)
Leucine (Leu, L)
n = 60 (15.83%)
Isoleucine (Ile, I)
n = 38 (10.03%)
Methionine (Met, M)
n = 14 (3.69%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 16 (4.22%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 14 (3.69%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 20 | 12 | 17 | 7 | 22 | 2 | 12 | 6 | 0 | 5 | 9 | 6 | 0 | 16 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 2 | 5 | 7 | 11 | 0 | 5 | 7 | 9 | 3 | 7 | 6 | 9 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 7 | 1 | 5 | 5 | 10 | 1 | 2 | 2 | 6 | 10 | 1 | 0 | 7 | 7 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 5 | 1 | 4 | 7 | 10 | 0 | 2 | 1 | 5 | 0 | 1 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 84 | 96 | 106 | 94 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 91 | 75 | 161 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 119 | 136 | 114 | ||||||||||||
| ND1 (size: 956 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 28 (8.83%)
Serine (Ser, S)
n = 18 (5.68%)
Threonine (Thr, T)
n = 26 (8.2%)
Cysteine (Cys, C)
n = 2 (0.63%)
Valine (Val, V)
n = 14 (4.42%)
Leucine (Leu, L)
n = 59 (18.61%)
Isoleucine (Ile, I)
n = 25 (7.89%)
Methionine (Met, M)
n = 22 (6.94%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 22 (6.94%)
Tyrosine (Tyr, Y)
n = 9 (2.84%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 10 (3.15%)
Asparagine (Asn, N)
n = 13 (4.1%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 2 (0.63%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 7 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 9 | 20 | 7 | 10 | 18 | 1 | 22 | 7 | 0 | 4 | 2 | 8 | 0 | 19 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 7 | 9 | 12 | 0 | 1 | 2 | 9 | 0 | 5 | 10 | 7 | 0 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 10 | 0 | 4 | 5 | 8 | 0 | 0 | 1 | 6 | 3 | 0 | 1 | 6 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 9 | 1 | 1 | 2 | 6 | 2 | 1 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 67 | 74 | 95 | 82 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 93 | 52 | 142 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 72 | 150 | 89 | ||||||||||||
| ND2 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.91%)
Alanine (Ala, A)
n = 16 (4.62%)
Serine (Ser, S)
n = 32 (9.25%)
Threonine (Thr, T)
n = 33 (9.54%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 58 (16.76%)
Isoleucine (Ile, I)
n = 34 (9.83%)
Methionine (Met, M)
n = 30 (8.67%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 20 (5.78%)
Tyrosine (Tyr, Y)
n = 11 (3.18%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 21 (6.07%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 14 (4.05%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 16 | 28 | 14 | 9 | 28 | 2 | 4 | 9 | 0 | 1 | 3 | 4 | 0 | 11 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 4 | 3 | 9 | 0 | 1 | 2 | 12 | 2 | 5 | 6 | 10 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 15 | 0 | 8 | 6 | 16 | 0 | 0 | 2 | 8 | 3 | 0 | 1 | 8 | 13 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 5 | 0 | 0 | 1 | 11 | 3 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 89 | 134 | 77 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 100 | 64 | 150 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 85 | 164 | 88 | ||||||||||||
| ND3 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.91%)
Alanine (Ala, A)
n = 16 (4.62%)
Serine (Ser, S)
n = 32 (9.25%)
Threonine (Thr, T)
n = 33 (9.54%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 58 (16.76%)
Isoleucine (Ile, I)
n = 34 (9.83%)
Methionine (Met, M)
n = 30 (8.67%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 20 (5.78%)
Tyrosine (Tyr, Y)
n = 11 (3.18%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 21 (6.07%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 14 (4.05%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 16 | 28 | 14 | 9 | 28 | 2 | 4 | 9 | 0 | 1 | 3 | 4 | 0 | 11 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 4 | 3 | 9 | 0 | 1 | 2 | 12 | 2 | 5 | 6 | 10 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 15 | 0 | 8 | 6 | 16 | 0 | 0 | 2 | 8 | 3 | 0 | 1 | 8 | 13 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 5 | 0 | 0 | 1 | 11 | 3 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 89 | 134 | 77 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 100 | 64 | 150 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 85 | 164 | 88 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 30 (6.55%)
Serine (Ser, S)
n = 41 (8.95%)
Threonine (Thr, T)
n = 39 (8.52%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 12 (2.62%)
Leucine (Leu, L)
n = 84 (18.34%)
Isoleucine (Ile, I)
n = 54 (11.79%)
Methionine (Met, M)
n = 32 (6.99%)
Proline (Pro, P)
n = 24 (5.24%)
Phenylalanine (Phe, F)
n = 23 (5.02%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 18 (3.93%)
Glutamine (Gln, Q)
n = 10 (2.18%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 40 | 14 | 29 | 11 | 7 | 29 | 3 | 32 | 8 | 2 | 6 | 1 | 5 | 0 | 15 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 2 | 13 | 5 | 11 | 1 | 6 | 3 | 7 | 1 | 5 | 15 | 4 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 20 | 2 | 5 | 11 | 13 | 3 | 3 | 6 | 9 | 6 | 0 | 2 | 11 | 7 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 5 | 3 | 2 | 2 | 10 | 0 | 1 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 71 | 106 | 162 | 120 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 125 | 76 | 205 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 20 | 102 | 195 | 142 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 10 (10.2%)
Threonine (Thr, T)
n = 3 (3.06%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 7 (7.14%)
Leucine (Leu, L)
n = 20 (20.41%)
Isoleucine (Ile, I)
n = 10 (10.2%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 2 | 7 | 3 | 3 | 8 | 0 | 6 | 2 | 0 | 1 | 2 | 4 | 0 | 4 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 3 | 3 | 1 | 2 | 0 | 2 | 0 | 2 | 0 | 1 | 1 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 1 | 2 | 2 | 5 | 1 | 0 | 0 | 2 | 2 | 0 | 0 | 4 | 1 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 20 | 21 | 27 | 31 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 9 | 21 | 17 | 52 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 21 | 41 | 33 | ||||||||||||
| ND5 (size: 1818 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (4.46%)
Alanine (Ala, A)
n = 33 (5.45%)
Serine (Ser, S)
n = 56 (9.26%)
Threonine (Thr, T)
n = 56 (9.26%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 23 (3.8%)
Leucine (Leu, L)
n = 95 (15.7%)
Isoleucine (Ile, I)
n = 54 (8.93%)
Methionine (Met, M)
n = 36 (5.95%)
Proline (Pro, P)
n = 23 (3.8%)
Phenylalanine (Phe, F)
n = 47 (7.77%)
Tyrosine (Tyr, Y)
n = 22 (3.64%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 11 (1.82%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 33 (5.45%)
Glutamine (Gln, Q)
n = 14 (2.31%)
Histidine (His, H)
n = 14 (2.31%)
Lysine (Lys, K)
n = 22 (3.64%)
Arginine (Arg, R)
n = 10 (1.65%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 37 | 17 | 34 | 21 | 19 | 34 | 1 | 19 | 13 | 1 | 4 | 3 | 15 | 1 | 22 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 3 | 3 | 9 | 11 | 12 | 1 | 3 | 7 | 16 | 1 | 10 | 6 | 6 | 1 | 19 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 19 | 17 | 1 | 11 | 8 | 28 | 2 | 3 | 4 | 12 | 10 | 1 | 1 | 12 | 21 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 11 | 0 | 4 | 7 | 20 | 2 | 1 | 2 | 7 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 105 | 136 | 208 | 157 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 62 | 161 | 128 | 255 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 169 | 244 | 178 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.37%)
Alanine (Ala, A)
n = 6 (3.45%)
Serine (Ser, S)
n = 13 (7.47%)
Threonine (Thr, T)
n = 7 (4.02%)
Cysteine (Cys, C)
n = 2 (1.15%)
Valine (Val, V)
n = 22 (12.64%)
Leucine (Leu, L)
n = 22 (12.64%)
Isoleucine (Ile, I)
n = 12 (6.9%)
Methionine (Met, M)
n = 12 (6.9%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 14 (8.05%)
Tyrosine (Tyr, Y)
n = 9 (5.17%)
Tryptophan (Trp, W)
n = 5 (2.87%)
Aspartic acid (Asp, D)
n = 4 (2.3%)
Glutamic acid (Glu, E)
n = 11 (6.32%)
Asparagine (Asn, N)
n = 3 (1.72%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.15%)
Arginine (Arg, R)
n = 2 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 0 | 9 | 1 | 0 | 0 | 0 | 17 | 0 | 0 | 8 | 0 | 9 | 5 | 13 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 1 | 4 | 0 | 2 | 0 | 3 | 2 | 11 | 9 | 2 | 0 | 0 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 3 | 2 | 3 | 0 | 3 | 2 | 4 | 1 | 7 | 2 | 3 | 4 | 3 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 4 | 7 | 4 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 68 | 6 | 42 | 59 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 24 | 29 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 37 | 7 | 62 | 69 | ||||||||||||
| Total protein-coding genes (size: 11401 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 216 (5.69%)
Alanine (Ala, A)
n = 236 (6.22%)
Serine (Ser, S)
n = 297 (7.82%)
Threonine (Thr, T)
n = 293 (7.72%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 190 (5.0%)
Leucine (Leu, L)
n = 611 (16.09%)
Isoleucine (Ile, I)
n = 332 (8.74%)
Methionine (Met, M)
n = 233 (6.14%)
Proline (Pro, P)
n = 198 (5.21%)
Phenylalanine (Phe, F)
n = 259 (6.82%)
Tyrosine (Tyr, Y)
n = 133 (3.5%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 71 (1.87%)
Glutamic acid (Glu, E)
n = 97 (2.55%)
Asparagine (Asn, N)
n = 155 (4.08%)
Glutamine (Gln, Q)
n = 79 (2.08%)
Histidine (His, H)
n = 96 (2.53%)
Lysine (Lys, K)
n = 94 (2.48%)
Arginine (Arg, R)
n = 67 (1.76%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 228 | 104 | 205 | 134 | 83 | 199 | 13 | 170 | 75 | 4 | 56 | 33 | 92 | 9 | 162 | 97 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 28 | 10 | 19 | 81 | 61 | 90 | 4 | 38 | 41 | 116 | 21 | 71 | 61 | 61 | 5 | 89 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 72 | 121 | 11 | 67 | 57 | 119 | 10 | 17 | 27 | 81 | 52 | 5 | 12 | 79 | 76 | 43 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 53 | 77 | 20 | 34 | 37 | 83 | 11 | 16 | 5 | 46 | 0 | 2 | 0 | 5 | 1 | 99 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 810 | 869 | 1153 | 966 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 462 | 980 | 731 | 1625 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 154 | 878 | 1560 | 1206 | ||||||||||||
>NC_027278.1 Ictidomys tridecemlineatus mitochondrion, complete genome GTTAATGTAGCTTAACTCAATAAAGCAAAGCACTGAAAATGCTTAGATGGGTATTTTGTACCCCATAAAC AATAGGTTTGGTCCTGGCCTTTTCATTAGCTTTTAGTTAACTTATACATGCAAGCATCCCCGCCCCAGTG AGAATGCCCTCTATATCTATAACTGATCAAAAGGTGCAGGCATCAAGTTCACTACTCCTAGTAGCTCATA ACGCCTTGCTCCACCACACCCCCACGGGACACAGCAGTAATTAACATTAAGCCTATAAACGAAAGTTTGA CTAAGTTAAGCTAAATTTAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCTAGTT AATGAAATACGGCGTAAAGCGTGATTAAGAGACTAATTAGATAAGATTAAAATTATACTAAACTGTAAAA AGTCTTGGTGTTAATGAAAATCAAATACGAAAGTAATCTTAAATTTTCTGAATTCACGATAGCTAAGACT CAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACATAAATATTCAACAAACAAGAATATTCGCC AGAGTACTACTAGCAATGGCCTAAAACTCAAAGGACTTGGCGGTGCTTTATACCCCTCTAGAGGAGCCTG TTCTATAATCGATAAACCCCGATACACCTCACCACCTTTAGCAAATATCAGCCTATATACCGCCATCTGC AGCAAACCCTAAAAAGGTCCTATAGTAAGCAAGAAAATTCTACATTAGTACGTTAGGTCAAGGTGTAGCC TATAAGGTGGGAAGAAATGGGCTACATTTTCTATTTTCCTAGAACAAATTACAATAGCTTTTATGAAATT CAGAGCATAAGGCGGATTTAGTAGTAAGTTAAGAATAGAGAGCTTAACTGAATAGGGCAATAAAGCACGC ACACACCGCCCGTCACCCTCTTCAAATATATCTTCATAGTTCTATAAGTAATATATTAAACCAAATATAT AAGAAGAGATAAGTCGTAACAAGGTAAACATACTGGAAAGTGTGTTTGGAAGAATCAAAATGTAGCTTAT TAACTAAAGCACCCGGCTTACACCCGAGAGATTTCACTCAATATGAACATTTTGAACTAATACTAGCCCA ACTTTTATCCCCTCCAAATACCATTCACCTAATAAATAAAACATTCATCTAAATAAAGTATAGGAGATAG AAATTTATATTAGGAGCTATAGAAAAAGTACCGTAAGGGAAAGATGAAAGAATAAATTTATAGTACAAAA AAGCAAAGATTAACCCTTTTACCTTTTGCATAATGATTTAACCAGAAAATGTTTGACAAAAAGAATTTAA GCCAAATACCCCGAAACCAGACGAGCTACTTATGAGCAGCCGATAAGAGCCCATCCATCTATGTTGCAAA ATAGTGGAATGACTCATAAGTAGAGGTGAAAAGCCTACCGAGCCTGGTGATAGCTGGTTGTCCAGACTAG AATTTTAGTTCTACTTTAAATTTACCTCAAGCACTTATAAGCCAAATGTAAATTTAAATGCTATTCTAAA GAGGGACAGCTCTTTAGAGTCAAGAAATAAACCTTATTTAGAGAGTAAATTTATTAATTTCCATAGTTGG CCTAAAAGCAGCCATCAATTAAAAAAGCGTTAAAGCTTAACCCAATCACCAAAACTTAATACCTGACTAC TTCCATGACCTCCCAAATCAACACTGGACTAATCTATTTCATAATAGAAGAAATTATGTTAAAATAAGTA ACAAGAAAGTATTCTCCCTGCATAAGCTTATATCAGATCGAATGATTCACTGATAGTTAACAGCTTCATA ATATTAAACAAACAGAACAACCATTATTACTTATACTGTTAACCCAACACTGGTATGCATAAAGGGAAAG ATTAAATAAAGTAAAAGGAACTCGGCAAACACTAACCCCGCCTGTTTACCAAAAACATCACCTCTAGCAT TAATAGTATTAGAGGCACTGCCTGCCCAGTGACACACGTTTAACGGCCGCGGTATCCTGACCGTGCAAAG GTAGCATAATCACTTGTTCTTTAAATAAGGACTAGTATGAATGGCTTGACGAGGGTTTAACTGTCTCTTA CTTTTAATCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATTTTATAATAAGACGAGAAGACCCTATG GAGCTTTAATTTAACAGTCTCACAGCCTTAATTATATCTTAGGAGTTAAAACTATTGTTCATAGACTAGA AATTTTGGTTGGGGTGACCTCGGAGTACAAACTAACCTCCGAATGATAATAATCTAGACATTACATGTCC AAATTACAACTCATTAATTGACCCAAATTATTGATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAA TCCTACTCAAGAGTCCATATCGACAGTTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCAAATGGT GTAACCGCTATTAATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGAAA TCCAGGTCGGTTTCTATCTATTACTACATTTCTCCCAGTACGAAAGGACAAGAGAAATAAGGCCAATTAT ACACTCATGCCTTAAGTTAATGGATGATATAATCTTAATCCAGTAAAATATTTTAAACAATCTGCCCTAG AATAGGGCTTGTTAAGATGGCAGAGCCTGGTAATTGCGTAAGACTTAAAACTTTATTTCAGAGGTTCAAC TCCTCTTCTTAACATTAATGTTTTTAGTTAACCTTCTACTTTTAATTATCCCAATCTTAGTAGCCATAGC CTTTCTTACCCTAATTGAACGAAAAATATTAGGATATATACAACTTCGCAAAGGCCCTAATGTTGTTGGA CCTTATGGCCTACTCCAACCATTTGCTGACGCAATAAAGCTATTCATTAAAGAACCCCTAAAACCCTTAA CATCATCTATTATACTATTTATTATTGCTCCAACCCTCGCCCTAACACTGGCATTTACCATATGAATTCC CTTACCCATACCCATACCCCTTATTAACATAAATATAGGAGTCCTATTTATCTTAGCCACTTCAAGCTTA GCCGTATATGCAATTTTATGATCTGGATGAGCTTCCAATTCTAAGTATGCTTTAATTGGAGCTCTACGAG CCGTAGCACAAACTATCTCATACGAAGTAACATTAGCAATTATCCTTCTCTCAGTACTTCTAATAAATGG ATCCTTTACTTTGTCCACACTCATTACTACTCAACAATTTTCATGACTCTTATTTCCAACATGACCTCTA GCAATAATATGATTTATTTCAACATTAGCAGAAACTAATCGAGCTCCATTTGATTTAACAGAAGGAGAGT CAGAACTCGTATCAGGATTTAATGTTGAATACGCAGCCGGTCCCTTTGCCTTATTTTTCATAGCTGAATA TACTAACATTATCATAATAAACGCATTAACAGTAACCTTATTTATAGGAGCACTACTAAACCCTATCTTA CCCGAAACTTTTACATTAAACTTTGTCCTAAAAACACTCATTTTAACTTCCACTTTTCTATGAATCCGAG CATCCTATCCTCGATTCCGTTACGACCAACTCATGCACCTCCTATGAAAAAACTTTTTACCCCTAACTCT AGCCTTATGCATATGACATATCTCTCTCCCAATTATAACCGCATGCGTACCACCCCAAATATAAGAAATA TGTCTGATAAAAGAGTTACTTTGATAGAGTAAATTATAGAGGTTTAAATCCTCTTATTTCTAGAACTATA GGGATTGAACCTAATCCTAAGAATTCAAAATTCTTCGTGCTACCTCTTACACCATGTCCTAAATAGTAAG GTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATATCCTTCCCGTACTAATTAACC CCTTGACTTCCTCCGCAATCTACTTTACTCTATTTTCTGGGACTATAATTACACTTTTCAGCTCACATTG ACTTCTAACTTGAGTAGGCCTTGAAATAAGCATACTAGCTATTATCCCCATTCTAATTAACAAAGGAAAC CCTCGATCCACAGAAGCTGCATGCAAATATTTTCTCATTCAAGCCACCGCATCAATAATCCTAATAATAG GCACAATAATTAACTTCATAGACTCAGGTCAATGAACTCTGTCCAATCCATATAATCAAATCTCATCATT CATATTTACAATTGCACTTTCAATAAAAATAGGACTCGCTCCATTTCACCTATGAGTTCCAGAAGTAACC CAAGGAATTCCACTCAAATCAGGACTAATCATGCTAACATGACAAAAAATTGCCCCAATCTCTATCGTAT ATCAAATCGCACCCTCTATAAACCCAACCCTCATACTACTTATAGGGACCCTATCAGTCATACTAGGAGG ATGAGGAGGACTTAACCAAACCCAACTACGAAAGATCATAGCATACTCATCAATCGCCCATATAGGATGA ATAATAGCAATCGTCACATATAATCCAACCTTAACAATATTTAACCTAGTCATTTATATTATACTTACCA TCAATATATTTATACTTCTCCTATTTTATAAAAAAACTTCCACCCTTTCCCTGTCTAACATATGAAATAA GTTCCCTCTTCTAACACCCACAATTTTAATTGTACTAATATCACTAGGAGGATTACCTCCTCTAACAGGA TTTACACCAAAATGAATTATCCTTAAAGAACTTATTTCAAATAACAACATCATCTTCTCTTCACTAATAG CAACTCTAGCACTACTAAACCTATACTTCTATACACGACTTATCTATTCAACATCTCTAACCTTATTCCC ATCATTTAATAACACTAAGATAAAATGACAATTCGAAAATATGAAACTCACACCTTTTCTACCCACACTA ATTATTACCTCTGCTCTTTCTCTCCCACTAATACCCCTCTTCTCACTCCTAAACTAGGAATTTAGGTTAA TATAGACCAAGGACCTTCAAAGTCCTAAGTAAGTATCCAATACTTAATTCCTGTGCTAAGGACTGCAAGA CTTTATCCTACATCAATTGAATGCAAACCAATCACTTTAATTAAGCTAAGCCCTTAATCTCTAGACTGAT GGGATTTAAACCCATAAGACCTTAGTTAACAGCTAAACGCCCTACTCAACTGGCTTCAATCTACTTCTCC CGCCGTAAGGGAAAAAAGGCGGGAGAAGCCCCGGCAGAGTTGAAGCTGCTCCTTTGAATTTGCAATTCAA TATGAATATTCACCTCGGGACTTGGCAAAAAGAGGACTCAACCTCTGTCTTTAGATTTACAGTCTAATGC TTACTCAGCCATTTTACCACCTACCTATGTTCATCAACCGTTGATTCTTCTCAACTAATCACAAAGATAT TGGAACACTTTACCTTCTATTTGGCGCTTGAGCTGGAATAGTAGGAACTGCACTTAGTCTACTAATCCGT GCTGAGCTAGGTCAACCTGGAGCTCTATTGGGTGACGACCAAATTTACAATGTTATTGTTACTGCTCATG CATTCGTTATAATTTTCTTTATAGTTATACCAATTATAATTGGTGGATTTGGAAACTGATTAGTACCCCT AATAATTGGAGCTCCTGATATAGCATTCCCACGAATAAATAATATAAGCTTCTGACTTCTTCCCCCTTCT TTTCTCCTCTTACTCGCTTCTTCTATGGTTGAGGCAGGAGCAGGAACTGGCTGAACCGTTTATCCTCCAT TAGCTGGAAATCTTGCCCATGCAGGAGCTTCAGTAGACCTAACCATCTTCTCCCTTCACTTAGCAGGAGT TTCATCCATCCTAGGAGCAATTAACTTTATTACAACAATTATTAACATAAAACCACCTGCCATATCTCAA TATCAAACTCCTTTATTTGTATGATCCGTGTTAATTACAGCAGTACTTCTACTCTTGTCCCTTCCGGTTC TTGCGGCAGGAATCACTATATTACTTACAGATCGTAATCTTAATACCACATTTTTTGACCCTGCTGGAGG TGGAGATCCTATCCTCTATCAACATCTATTTTGATTCTTTGGACACCCTGAAGTCTATATTCTTATCCTT CCAGGATTTGGTATAATTTCTCATATCGTAACATATTACTCAGGAAAAAAAGAACCATTCGGTTATATAG GAATAGTATGAGCTATAATATCTATTGGTTTCCTTGGATTTATTGTATGAGCCCATCACATATTTACCGT TGGAATAGATGTAGATACTCGAGCTTATTTTACATCCGCAACTATAATTATTGCTATTCCTACAGGAGTA AAAGTTTTTAGCTGATTAGCGACCCTGCACGGAGGAAATATTAAATGATCACCTGCAATACTATGAGCAC TCGGCTTTATTTTCTTATTCACTGTAGGAGGCCTAACAGGTATTGTCTTAGCCAACTCCTCATTAGATAT TGTCCTACACGATACATATTATGTAGTAGCCCACTTTCACTATGTATTATCAATGGGAGCTGTATTTGCC ATTATGGGAGGATTCGTTCACTGATTCCCTCTTTTTTCTGGTTACACACTAAATGATATATGAGCTAAAA TTCATTTTACTGTAATATTTGTTGGAGTAAATTTAACTTTCTTTCCTCAACATTTCCTAGGGTTATCAGG TATACCACGTCGATATTCTGATTACCCAGATGCTTACACAGCATGAAATACTGTATCCTCAATAGGTTCC TTTATTTCTCTCACAGCTGTTATAATCATAATTTTTATAATTTGAGAAGCATTTGCATCAAAACGAGAAG TCCTCACCGTAGAACTAACGCCAACTAACCTAGAATGACTGCATGGGTGCCCTCCACCCTATCACACATT TGAAGAACCTACTTACATTAAAGCTTAAATCAAGAAAGGAAAGAATCGAACTTCCTAAGACTAGTTTCAA GCCAGCCTCATAACCATTATGACTTTCTTCATGAGATATTAGTAAAATAATTACATAACTTTGTCAAAGT TAACTTATAGGTTAAATTCCTATATATCTCTATGGCTTACCCGCTCGAATTAGGATTTCAAGACGCTACA TCTCCCATTATAGAAGAGCTTTTACACTTTCATGACCATACCCTTATAATTGTTTTCTTAATTAGCTCCT TAGTCCTCTATATCATCTCATTAATATTAACCACAAAATTAACTCATACAAGCACTATAGATGCTCAAGA AGTAGAAACTATCTGAACCATCCTTCCTGCTATTATCCTTATTCTGATTGCTCTCCCCTCTCTACGTATT CTATACATAATAGACGAAATTAACGACCCATCCTTAACAGTAAAGACAATAGGCCACCAATGATATTGAA GCTATGAATACACTGACTACGAAGACCTTAACTTTGACTCTTATATAATTCCAACTTCAGACTTAGCCCC CGGAGATCTACGACTTCTGGAAGTCGACAATCGAGTTGTTCTTCCAATAGAGTTACCTGTACGAATATTA ATCTCATCTGAAGATGTACTTCACTCTTGAGCAGTCCCATCCCTTGGCTTAAAAACAGATGCCATCCCAG GCCGACTTAATCAAGCTACGCTAACATCAACACGACCAGGACTTTATTATGGGCAATGCTCTGAGATTTG CGGATCAAATCATAGCTTCATACCTATTGTTCTTGAATTAGTTCCACTAAAACACTTTGAAAACTGATCC TCATCAATACTATAAATTCATTATGAAGCTGAATAGCGTCAACCTTTTAAGTTGAAGATTAGGAGTTGAA CCTCCTCATAATGAAATGCCCCAACTAGACACATCCACATGATTTATCACAATTCTATCAATGATTCTAG CCCTTTTCTTTATATTTCAACTTAAAATCTCAAATCACTCTTATCCGTCTAATCCCTCTCTTAAATATAC TAAACTAATTGAACATAAAACTCCTTGAGAAGAAAAATGAACGAAAATCTATTTGCCTCTTTCATTACCC CTACACTTATAGGTCTCCCTATTGTCCTTCTTATTATTATATTTCCCAATTTACTCTTTCCTTCACCTAC TCGACTAATAAACAACCGTTTAGTATCATTCCAACAATGACTAATTCAACTTGTACTAAAACAAATAATG GCAATGCACAACCCTAAAGGACGTACCTGATCCTTAATACTAATTTCATTAATTATATTTATTGGCTCAA CTAACCTTCTAGGCCTTCTACCTCATTCTTTCACACCTACAACCCAATTATCAATAAACTTAGGAATGGC CATCCCTCTATGAGCAGGAGCCGTAATCACCGGATTCCGTCATAAGACTAAAGCATCATTAGCCCACTTT CTCCCACAAGGAACCCCAATTCCTCTAATCCCTATACTTATTATTATTGAGACAATTAGCCTTTTTATTC AACCTATAGCATTAGCTGTACGATTAACAGCTAATATTACAGCTGGTCATCTTCTTATACATTTAATTGG AGGAGCAACTCTTGTATTAACATCTATTAGCCCTCCCACAGCTATTCTTACTTTTATTATTCTCGTCCTA TTAACAATACTCGAATTTGCAGTTGCATTAATTCAAGCCTATGTTTTTACCCTCTTAGTAAGTCTTTATT TACACGATAATACTTAATGACCCACCAAACCCACGCCTATCATATAGTTAATCCTAGTCCCTGACCATTA ACAGGGGCCCTCTCCGCCTTACTCCTAACGTCTGGCCTAGTAATATGATTTCACTTCAACTCCTCCTTCC TTCTTACACTAGGCCTAACAGCTAATATCCTAACAATATACCAATGATGACGAGACGTCGTGCGAGAAGG TACATTTCAAGGTCACCACACATCAATTGTTCAAAAAGGTTTACGATATGGCATAGTACTATTTATTATT TCAGAAGTATTCTTCTTTGCCGGATTTTTCTGAGCATTCTACCATTCTAGCTTAGCCCCAACCCCCGAAT TAGGCAGTTGCTGACCTCCAGTAGGAATCAACCCACTTAATCCCTTAGAAGTTCCACTATTAAATACCTC TGTTCTTTTAGCTTCGGGAGTTTCAATTACTTGAGCTCACCACAGCCTAATAGAAGGAGACCGAAAACAT ATAGTCCAAGCACTATCAATTACAATTGCTCTAGGACTTTATTTTACTCTTCTCCAAGCCTCTGAATATT TAGAGACTTCTTTTACAATCTCAGATGGAGTATATGGCTCAACATTTTTCATAGCCACAGGCTTCCACGG CCTTCACGTCATTATTGGGTCAACCTTTCTCCTAGTATGTCTCATTCGTCAACTAAATTTTCACTTTACA TCAAGCCATCATTTCGGATTTGAAGCAGCCGCATGATACTGACACTTTGTAGACGTAGTATGACTCTTCC TATACGTATCTATCTATTGATGAGGTTCATATTCTCTTAGTATTAATTAGTACAATTGACTTCCAATCAA TTAGTTCTGGAACTAACCCAGAAGAGAATAATAAACCTTATAGTATCCCTCTTTATAAATTCTTTCATTG CTCTACTATTAATTTCCGTAGCATTTTGACTACCCCAGCTAAACGTGTATGCTGAAAAAGCAAGTCCTTA CGAATGCGGCTTTGATCCTATAGGATCTGCTCGCCTACCATTCTCAATAAAATTTTTTCTTGTTGCAATT ACATTTCTTCTATTTGATCTAGAGATTGCTCTTCTTCTCCCCCTCCCCTGAGCCTCCCAAACAAACAATC TTAATCTTATATTAACTATAGCCTTACTTTTAGTCTTAATTCTCACTCTCGGACTAGCCTATGAATGAGT TCAAAAGGGCCTAGAATGAATTGAATATGATAATTAGTTTAAAATAAAACAAGTGATTTCGACTCACTAA ATTATGGGTTACCATAATTATCAAAATGCCTATTATTGTTCTTAATACTATCATAGCTTATTCTACGTCC CTATTAGGAATATTCATCTACCGATCCCACCTAATATCGTCACTCCTATGCCTAGAAGGAATAATATTAT CAATATTTGTCTTATGCTCACTCTTAATTATTAATTTCCATTTTTCTTTATCATTTATGATTCCCATTAT TTTACTAGTATTTGCTGCATGTGAAGCAGCTGTAGGTCTAGCCCTTCTCGTAATAGTATCAAATACATAC GGTCTAGACTATGTCCAAAACCTAAATATTCTTCAATGCTAAAAATTGTTATTCCCACAATACTACTTGC CCCCCTTATATGATTCTCAAAACCCTCCATAATCTGAATCAACCCCTCAGTTCACAGTCTGTTAATTAGC CTAATTGTTCTTTTCACATTAAATCGTCCCACAAATACAGATCTAATTTTTTCGCTAGCTTTCTTTACCG ATCCTCTATCCTCCCCCCTATTAATTCTTACAGCATGACTCTTACCCCTTATAATTATAGCAAGTCAGAG CCATCTAACCCATGAACCATTAATTCGAAAAAAACTGTACATTCTTATATTAATCTCGCTACAATCCTTT TTGATTATAACCTTCTCTGCTACTGAATTAATTATATTTTATATTCTATTTGAGGCTACCTTAATCCCCA CACTAATTATTATCACTCGATGAGGGAACCAAGCTGAGCGATTAAATGCAGGATTATATTTCCTATTTTA TACCCTAGTAGGTTCATTACCCTTACTAGTAGCATTAATCTATATTCAAAAATCTACAGGATCCTTAAAC TTTATCATCTCATTATACCAGTCACCTAACCTCTCCATATCCTGAACAAATGACATTTTATGATTAGCAT GTATAATAGCTTTTATAGTTAAAATACCCTTATATGGTCTTCACCTTTGATTGCCAAAAGCTCACGTTGA AGCCCCCATTGCTGGTTCCATAGTCCTAGCTGCTATCCTACTAAAACTTGGCGGATATGGTATAATCCGA ATTTCAACTTTTCTACATCCTATTACATGTAATATAGCGTACCCCTTTATTATGTTATCGTTATGAGGTA TAATTATAACAAGCTCAATTTGCTTACGACAAACAGACCTAAAATCCCTCATTGCTTATTCATCAGTAAG CCACATAGCACTAGTAATTGTAGCAATCATAATTCAAACTCCTTGAAGCTTTATAGGAGCCACAGCACTA ATAATTGCCCACGGACTAACATCTTCCATATTATTCTGCCTAGCAAACACTAATTATGAACGAATCCACA GCCGAACTATAACTTTAGCTCGAGGCTTACAATCTATTCTCCCCTTAATAGCAACATGATGAGTTTTAGC TACCTTAACCAATTTAGCTCTCCCACCTTCTATTAATCTAATTGGCGAGCTATTCATTATTATAGCATCA TTTACTTGATCAAATATTACAATTATCTTAACCGGACTAAATATACTAATTACAGCCCTCTACTCACTAT ATATGCTAATCATAACACAACGAGGAAAATTTACATACCATACATTAAATATTAGTCCCTCCTTTACGCG AGAAAACACGCTCATATTTCTTCACATTTTCCCACTTATTATTTTATCAACAAACCCCACTATTATTCTG GGTCAATTATACTGTAAATATAGTTTAAGCAAAACTTTAGATTGTGAATCTAACAATAGAGAATCGTAAT CTCTTATTTACCAAGAAAGCATGCAAGAACTGCTAATTCATGCTCCCCGTGTTTACATCCACGGCTTTCT TAACTTTTATAGGATAGTAGTAATCCATTGGTCTTAGGAACCAAAAAATTGGTGCAACTCCAAATAAAAG TAATAAATATATTCTCTTCACTTATACTCACATCACTCGTAACCCTCTCATTTCCTATTTTTCTCACCAT GACTAATTATTATAAACATATCAACTACCCAAACTACGTAAAAATCTCTATTATTTGTGCATTATCACTC TGCATAGTACCAACACTAATATTTATTAACTCAAACTATGAACTTATTATCTCAAACTGACACTGAATAA CTATCCAAACATTCACTCTCTCCATAAGCTTCAAGTTAGACTATTTTTCTATACTTTTTATACCTGTAGC ATTATTTGTGACATGGTCAATTATAGAATTTTCAATATGATATATACACTCAGACCCTTTCATTAACCGC TTCTTCAAATACCTACTCCTATTCCTTATCACTATAATAATTCTAGTTACATCCAACAATCTATTCCAAC TATTCATTGGCTGAGAAGGAGTAGGCATCATATCCTTTTTATTAATTGGCTGATGATACGGTCGAACAGA TGCTAATACAGCAGACCTTCAAGCTATCCTATATAACCGAATTGGAGATATTGGATTTGTACTAGCTATA GCATGATTCTTACTCAACTCAAACTCATGAGAATTTCAACAACTTTTCATGATAGATGTATCTTTATTCC CCCTACTAGGCCTACTCTTGGCCGCCACAGGGAAATCTGCCCAATTCGGTCTTCATCCCTGATTACCCTC TGCTATAGAAGGTCCAACCCCTGTATCAGCTCTACTTCACTCCAGTACTATAGTAGTAGCAGGAGTTTTT CTCCTCATCCGCTTCTACCCGCTAATAGAACATAATAAAATCATCCAAACACTTACCCTCTGCTTAGGAG CTATTACTACTCTATTTACTGCCATCTGTGCTCTTACCCAAAATGACATTAAAAAGATTATTGCATTTTC CACTTCAAGCCAACTAGGATTAATAATAGTAACCATTGGAATTAATCAGCCTCACTTAGCCTTTCTCCAC ATTTGTACACATGCATTCTTTAAAGCCATATTATTTATATGCTCAGGATCAATTATTCATAACCTAAACG ATGAACAAGACATTCGAAAAATAGGAGGACTATTCAAAGCCCTTCCATTTACCTCATCTTCACTCATTAT TGGCAGTCTAGCACTTACAGGAACCCCTTTCCTAACTGGATTCTACTCTAAAGACCTAATCATTGAATCC GCAAACACGTCGTATACCAACGCCTGAGCCCTAACTATTACTCTCCTCGCCACCTCCCTAACTGCTGTCT ACAGCACACGAATTATTTTCTATGTTCTAATAGGACGACCTCGATTTTCTACACTAACTTCAATTAATGA AAATAACCCCCAACTACTTAACTCAATTAAACGTCTTCTCATTGGAAGTATTATTGCAGGATTTATCCTT TCGTATAATATTCCACCTATAAATATCCCAGTCCTAACTATACCCACCTACCTGAAACTTACTGCACTAT TAGTAACCATTCTAGGATTCGTCATTGCTATAGAACTAAACTCAATAACTCTTTATCTAAAAACCAAAAT ATACTCAAACACATCAAAATTTTCAACCTTACTAGGCTATTTTCCTACCATCGTTCATCGATTCAACCCT CATCTTAACCTTGTAATAAGCCAAAAATTCTCATCAACCCTATTAGACTTAGTATGACTAGAAAAATCTA TTCCCAAACTTACAACTAACCTTCACTCAACAGCCTCCACCATAACCTCTAATCAAAAAGGCCTCATCAA ATTATACTTTTTATCATTCTTAACTTCAACACTCCTAGCAACCATAATCGTATTCTATTTCCACGCGTAA TCTCAATTACAATAAAAATACTAACAAACAACGATCAGCCAGCTACAACTATTAATCAACTTCCACAATT ATATATAGCTGCCACCCCTATTGAATCCTCACGAATTAATCCCAACTCATCCCCCTCAAACACTATCCAA TTTCCCGAATCCTTAAACTCAATTACAACTTCTACTTCATCATATAAAACTATAAACATAACAATTAAAA ATTCCACTAAAAACCCTAATAACAAAGCCCCCCAAATAACTACACTTGATCCCCATGTCTCCGGATATTC CTCTGTTGCTATAGCCGTAGTGTAGCCAAACACTACCAATATCCCCCCTAAATAAATTAAAAACACCATT AAACCTAAGAAAGACCCTCCAAAATATAATACTACTCCGCATCCAATCCCCCCACTAACAATTAATCCTA AACCTCCGTAAATAGGAGAAGGTTTTGAAGAAAATCCTACAAAACCTAAAACAAAAAGTATGCTTAATAA ATATGTTATATAAGTCATTATTTTTACATGGAATCTAACCATGACTAATGACATGAAAAATCATCGTTGT TATTCAACTATAAAAACACTAATGACAAACATTCGTAAAACTCACCCTTTAATCAAAATTGTTAATCACT CCTTTATTGACTTACCTGCACCTTCCAACATCTCCGCATGATGAAACTTTGGATCCCTACTAGGTCTCTG CCTAGCCATCCAAATCCTCACTGGGTTATTCCTAGCAATACATTATACGTCTGATACTATAACAGCCTTT TCATCAGTCACCCACATCTGTCGAGATGTTAATTACGGCTGACTTATCCGCTATATACATGCTAATGGTG CATCCATATTTTTTATCTGCCTTTTCCTTCATGTAGGCCGAGGATTATACTATGGCTCATACACTTACTT TGAAACATGAAACATTGGAGTTATCCTCCTATTTGCAGTAATAGCCACAGCTTTTATAGGCTATGTCCTT CCCTGAGGCCAAATATCATTCTGAGGGGCAACCGTAATTACCAATCTTTTATCTGCCATCCCATACATCG GTACAACCCTAGTAGAGTGAATTTGAGGTGGTTTCTCAGTAGACAAAGCTACCCTAACTCGATTCTTCGC ATTCCATTTTGTTCTTCCATTTATCATCGCAGCTCTAGTCATAGTCCACCTTCTTTTCCTTCATGAAACT GGGTCAAACAACCCCTCAGGACTTATTTCTGACTCAGACAAAATCCCCTTTCACCCATATTACACTATTA AAGACATCCTCGGAGTCCTCCTTCTTATTCTAGCTCTGATAACCCTAGTCCTATTTTCACCTGACCTTCT AGGAGATCCTGATAATTACACACCCGCAAATCCTTTAAGTACCCCACCTCATATTAAACCAGAATGGTAC TTCTTATTTGCCTACGCCATTCTACGATCTATTCCCAACAAACTAGGAGGCGTCCTAGCCTTAGTCTTCT CAATCCTTATTCTAATACTCTTTCCACTGCTTCACTTATCTAAACAACGTAGCATGATATTCCGACCATT AAGTCAATGTATATTCTGAATCCTAGTAGCAGACCTATTTACATTAACCTGAATCGGAGGACAACCCGTT GAATATCCATTTATCATTATTGGCCAACTAGCATCGGTCCTATACTTCACCATCATTCTCTTAATTCTAC CAACCATCAGCCTAATTGAAAATAAACTTCTTAAATGAAGAGCCCTAATAGTATAAACATTACTTTGGTC TTGTAAACCAAAAATGAAGTTATAAACTTCTTAGAGCATTCCATCAGGGAAGAAAATACACTTTCCACCT TCAACTCCCAAAGCTGATATTTCTTACTTAAACTATTCCCTGCACTCGACCAGTTACTCAATTCTTGACT TTTATGTCACTATTAACTTTCACCCAACAGCTCATCCCTATGTATGTCGTGCATTTAATGCTTTACCCCA TTAGACCATCACTAATCCATGTACATAGGACATTACATGTTTAATCAACATTAATATCGCTCCCATCATG CATATAAGCACGTCCATAATACTCACATAGTACATAATACAATAGCCTATCCCTTCACATTAAATGCTTG TCAACACGACCGTGATCCACCCATAAACACCGTTCAAAGTACATAGCACATTAATATCACTGGCGGTACA TACCACATTAAGTCATAAATCTTTCTCGATCCAAATGACTATCCCCTACCAATTTTGGTCTCATAATCTA CCACCCTCCGTGAAACCATCTACTCGCCCACTCCGTGTCCCTCTTCTTGCTCTGATCCCATTTTAACTTG GGGGTAGCTAATAGTGATCTTTATCTGGCATCTGGTTCCTACCTCAGGGCCATAAACTGCATAATCGCCC ACACGTTCCCCTTAAATAAGACATCACGATGGATTAGTTCCATTCTAGCCCGTGACCCAACATAACTGCA CTGTCATGCCTTTAGTGGTTTTTATTTTTGGGGGATGCGGGGACTCACCATTGGCCGTCAGAGGCCTCGT TCCATTCAATTCAATTGTAGCTGGACTTATTAGTCAATATTCTCGCTTTACATAGTTACTATCTGCCATA GTCGGGCTTAATGCTCGATAGACAAAAAAAATGTTAAAACAGAAATTCCATAGAAGACCTAAATCAAAAA TAAATGTTTTATCATTTACTTTTTTAAATCTATATTCCTATTCTTATCTGCTTAAAATTTTATTAACTTC TTTCCCAGTAGTTTAGAATCAATAAATTAATCCTAAAACTCTAATGAGCCAAACTATAGTAATTAACTAT TAAACTAATAGACACTAATAATACTTACATATAACTCTGTTTGACAAATCCTATATAAGCATGCTCATAA ACTTACAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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