Viewing data for Aquila chrysaetos


Scientific name Aquila chrysaetos
Common name Golden eagle
Maximum lifespan 48.00 years (Aquila chrysaetos@AnAge)

Total mtDNA (size: 17332 bases) GC AT G C A T
Base content (bases) 8088 9244 5657 2431 4091 5153
Base content per 1 kb (bases) 467 533 326 140 236 297
Base content (%) 46.7% 53.3%
Total protein-coding genes (size: 11368 bases) GC AT G C A T
Base content (bases) 5417 5951 4020 1397 2645 3306
Base content per 1 kb (bases) 477 523 354 123 233 291
Base content (%) 47.7% 52.3%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1548 bases) GC AT G C A T
Base content (bases) 664 884 398 266 379 505
Base content per 1 kb (bases) 429 571 257 172 245 326
Base content (%) 42.9% 57.1%
Total rRNA-coding genes (size: 2505 bases) GC AT G C A T
Base content (bases) 1194 1311 693 501 518 793
Base content per 1 kb (bases) 477 523 277 200 207 317
Base content (%) 47.7% 52.3%
12S rRNA gene (size: 968 bases) GC AT G C A T
Base content (bases) 492 476 286 206 184 292
Base content per 1 kb (bases) 508 492 295 213 190 302
Base content (%) 50.8% 49.2%
16S rRNA gene (size: 1537 bases) GC AT G C A T
Base content (bases) 702 835 407 295 334 501
Base content per 1 kb (bases) 457 543 265 192 217 326
Base content (%) 45.7% 54.3%

ATP6 (size: 684 bases) GC AT G C A T
Base content (bases) 319 365 248 71 166 199
Base content per 1 kb (bases) 466 534 363 104 243 291
Base content (%) 46.6% 53.4%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 74 94 65 9 40 54
Base content per 1 kb (bases) 440 560 387 54 238 321
Base content (%) 44.0% 56.0%
COX1 (size: 1551 bases) GC AT G C A T
Base content (bases) 759 792 505 254 379 413
Base content per 1 kb (bases) 489 511 326 164 244 266
Base content (%) 48.9% 51.1%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 320 364 223 97 148 216
Base content per 1 kb (bases) 468 532 326 142 216 316
Base content (%) 46.8% 53.2%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 381 403 261 120 201 202
Base content per 1 kb (bases) 486 514 333 153 256 258
Base content (%) 48.6% 51.4%
CYTB (size: 1143 bases) GC AT G C A T
Base content (bases) 555 588 413 142 279 309
Base content per 1 kb (bases) 486 514 361 124 244 270
Base content (%) 48.6% 51.4%
ND1 (size: 973 bases) GC AT G C A T
Base content (bases) 470 503 338 132 248 255
Base content per 1 kb (bases) 483 517 347 136 255 262
Base content (%) 48.3% 51.7%
ND2 (size: 1039 bases) GC AT G C A T
Base content (bases) 481 558 380 101 236 322
Base content per 1 kb (bases) 463 537 366 97 227 310
Base content (%) 46.3% 53.7%
ND3 (size: 349 bases) GC AT G C A T
Base content (bases) 160 189 119 41 91 98
Base content per 1 kb (bases) 458 542 341 117 261 281
Base content (%) 45.8% 54.2%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 663 715 523 140 307 408
Base content per 1 kb (bases) 481 519 380 102 223 296
Base content (%) 48.1% 51.9%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 148 149 109 39 71 78
Base content per 1 kb (bases) 498 502 367 131 239 263
Base content (%) 49.8% 50.2%
ND5 (size: 1817 bases) GC AT G C A T
Base content (bases) 835 982 632 203 423 559
Base content per 1 kb (bases) 460 540 348 112 233 308
Base content (%) 46.0% 54.0%
ND6 (size: 519 bases) GC AT G C A T
Base content (bases) 257 262 207 50 61 201
Base content per 1 kb (bases) 495 505 399 96 118 387
Base content (%) 49.5% 50.5%

ATP6 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%)
Alanine (Ala, A)
n = 16 (7.05%)
Serine (Ser, S)
n = 11 (4.85%)
Threonine (Thr, T)
n = 26 (11.45%)
Cysteine (Cys, C)
n = 1 (0.44%)
Valine (Val, V)
n = 8 (3.52%)
Leucine (Leu, L)
n = 63 (27.75%)
Isoleucine (Ile, I)
n = 20 (8.81%)
Methionine (Met, M)
n = 7 (3.08%)
Proline (Pro, P)
n = 17 (7.49%)
Phenylalanine (Phe, F)
n = 8 (3.52%)
Tyrosine (Tyr, Y)
n = 3 (1.32%)
Tryptophan (Trp, W)
n = 4 (1.76%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.76%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 8 (3.52%)
Histidine (His, H)
n = 4 (1.76%)
Lysine (Lys, K)
n = 3 (1.32%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 16 5 5 11 34 5 8 6 2 1 4 3 0 0 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 4 6 6 0 2 4 3 0 1 9 7 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 10 0 1 3 4 0 0 3 0 3 1 0 1 8 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 4 0 0 1 3 0 0 3 1 1 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
38 89 68 33
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 67 33 106
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 92 98 27
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPAPWLLIMLASWLTLTLIVQPKLLFFTSTNILPNKPITTINLSPWNWPWS*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (3.64%)
Serine (Ser, S)
n = 4 (7.27%)
Threonine (Thr, T)
n = 6 (10.91%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.82%)
Leucine (Leu, L)
n = 11 (20.0%)
Isoleucine (Ile, I)
n = 5 (9.09%)
Methionine (Met, M)
n = 2 (3.64%)
Proline (Pro, P)
n = 8 (14.55%)
Phenylalanine (Phe, F)
n = 2 (3.64%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 5 (9.09%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (3.64%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 4 1 1 5 4 0 1 2 0 1 0 0 0 1 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 1 0 0 0 0 0 0 4 4 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 2 0 0 3 1 0 0 0 0 0 0 0 0 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
3 20 20 13
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
5 20 10 21
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
1 25 24 6
COX1 (size: 1551 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 46 (8.91%)
Serine (Ser, S)
n = 26 (5.04%)
Threonine (Thr, T)
n = 41 (7.95%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 34 (6.59%)
Leucine (Leu, L)
n = 62 (12.02%)
Isoleucine (Ile, I)
n = 41 (7.95%)
Methionine (Met, M)
n = 26 (5.04%)
Proline (Pro, P)
n = 32 (6.2%)
Phenylalanine (Phe, F)
n = 41 (7.95%)
Tyrosine (Tyr, Y)
n = 17 (3.29%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 16 (3.1%)
Glutamic acid (Glu, E)
n = 9 (1.74%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 9 (1.74%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 30 23 9 15 28 3 7 8 1 4 14 15 1 6 35
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 1 11 25 9 1 3 24 13 7 2 12 16 2 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 17 1 3 9 10 1 0 3 2 15 2 0 2 13 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 8 1 4 12 9 0 0 2 5 1 0 1 0 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
152 123 136 106
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 142 94 204
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
25 240 183 69
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 16 (7.05%)
Serine (Ser, S)
n = 17 (7.49%)
Threonine (Thr, T)
n = 16 (7.05%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 15 (6.61%)
Leucine (Leu, L)
n = 28 (12.33%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 11 (4.85%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 9 (3.96%)
Tyrosine (Tyr, Y)
n = 8 (3.52%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 12 (5.29%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 6 (2.64%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 10 (4.41%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 18 9 3 8 15 1 1 7 0 2 8 5 0 2 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 1 1 10 5 0 1 2 3 2 1 4 9 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 10 0 1 5 8 1 0 2 0 8 0 0 0 6 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 13 1 6 6 3 1 0 2 2 1 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
65 63 58 42
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 61 62 82
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 99 96 24
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 22 (8.46%)
Serine (Ser, S)
n = 22 (8.46%)
Threonine (Thr, T)
n = 18 (6.92%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 13 (5.0%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 9 (3.46%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 12 9 4 11 12 3 2 6 2 1 7 4 1 4 20
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 3 7 11 1 3 8 8 0 3 5 4 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 8 1 3 11 3 0 0 5 3 6 2 0 2 5 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 6 1 3 2 2 0 0 1 4 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
66 72 58 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
42 69 55 95
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 120 89 40
CYTB (size: 1143 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.32%)
Alanine (Ala, A)
n = 24 (6.32%)
Serine (Ser, S)
n = 25 (6.58%)
Threonine (Thr, T)
n = 29 (7.63%)
Cysteine (Cys, C)
n = 4 (1.05%)
Valine (Val, V)
n = 13 (3.42%)
Leucine (Leu, L)
n = 69 (18.16%)
Isoleucine (Ile, I)
n = 32 (8.42%)
Methionine (Met, M)
n = 9 (2.37%)
Proline (Pro, P)
n = 26 (6.84%)
Phenylalanine (Phe, F)
n = 28 (7.37%)
Tyrosine (Tyr, Y)
n = 13 (3.42%)
Tryptophan (Trp, W)
n = 11 (2.89%)
Aspartic acid (Asp, D)
n = 6 (1.58%)
Glutamic acid (Glu, E)
n = 7 (1.84%)
Asparagine (Asn, N)
n = 21 (5.53%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 13 (3.42%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 26 7 9 21 34 3 2 6 2 1 4 7 1 4 24
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 2 3 14 7 0 1 9 14 0 3 12 10 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
18 8 0 2 12 9 0 0 2 2 11 3 0 4 17 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 4 3 1 5 7 3 1 3 3 1 0 0 1 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 122 103 82
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 102 79 151
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 189 127 46
ND1 (size: 973 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.02%)
Alanine (Ala, A)
n = 30 (9.29%)
Serine (Ser, S)
n = 27 (8.36%)
Threonine (Thr, T)
n = 25 (7.74%)
Cysteine (Cys, C)
n = 3 (0.93%)
Valine (Val, V)
n = 13 (4.02%)
Leucine (Leu, L)
n = 65 (20.12%)
Isoleucine (Ile, I)
n = 23 (7.12%)
Methionine (Met, M)
n = 12 (3.72%)
Proline (Pro, P)
n = 24 (7.43%)
Phenylalanine (Phe, F)
n = 17 (5.26%)
Tyrosine (Tyr, Y)
n = 13 (4.02%)
Tryptophan (Trp, W)
n = 8 (2.48%)
Aspartic acid (Asp, D)
n = 4 (1.24%)
Glutamic acid (Glu, E)
n = 10 (3.1%)
Asparagine (Asn, N)
n = 11 (3.41%)
Glutamine (Gln, Q)
n = 6 (1.86%)
Histidine (His, H)
n = 4 (1.24%)
Lysine (Lys, K)
n = 7 (2.17%)
Arginine (Arg, R)
n = 9 (2.79%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 12 9 7 20 28 5 4 4 2 2 2 8 1 5 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 3 3 15 12 0 1 2 8 2 3 16 5 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 10 3 7 8 7 0 0 5 3 10 2 1 2 9 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 8 2 1 3 6 1 1 4 2 2 0 0 0 0 6
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
70 103 83 68
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
38 101 55 130
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 134 117 49
ND2 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 29 (8.41%)
Serine (Ser, S)
n = 31 (8.99%)
Threonine (Thr, T)
n = 54 (15.65%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.9%)
Leucine (Leu, L)
n = 73 (21.16%)
Isoleucine (Ile, I)
n = 23 (6.67%)
Methionine (Met, M)
n = 13 (3.77%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 14 (4.06%)
Tyrosine (Tyr, Y)
n = 6 (1.74%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.74%)
Asparagine (Asn, N)
n = 10 (2.9%)
Glutamine (Gln, Q)
n = 8 (2.32%)
Histidine (His, H)
n = 11 (3.19%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 17 10 3 23 39 3 5 8 0 1 1 8 0 3 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 4 17 8 0 0 5 6 1 5 7 5 2 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 23 0 3 12 12 0 1 3 1 5 2 0 1 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 6 0 1 0 10 3 1 0 2 0 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 109 117 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 129 55 133
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 142 150 40
ND3 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 29 (8.41%)
Serine (Ser, S)
n = 31 (8.99%)
Threonine (Thr, T)
n = 54 (15.65%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.9%)
Leucine (Leu, L)
n = 73 (21.16%)
Isoleucine (Ile, I)
n = 23 (6.67%)
Methionine (Met, M)
n = 13 (3.77%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 14 (4.06%)
Tyrosine (Tyr, Y)
n = 6 (1.74%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.74%)
Asparagine (Asn, N)
n = 10 (2.9%)
Glutamine (Gln, Q)
n = 8 (2.32%)
Histidine (His, H)
n = 11 (3.19%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 17 10 3 23 39 3 5 8 0 1 1 8 0 3 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 4 17 8 0 0 5 6 1 5 7 5 2 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 23 0 3 12 12 0 1 3 1 5 2 0 1 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 6 0 1 0 10 3 1 0 2 0 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 109 117 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 129 55 133
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 142 150 40
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 16 (3.49%)
Alanine (Ala, A)
n = 29 (6.33%)
Serine (Ser, S)
n = 41 (8.95%)
Threonine (Thr, T)
n = 58 (12.66%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 8 (1.75%)
Leucine (Leu, L)
n = 112 (24.45%)
Isoleucine (Ile, I)
n = 35 (7.64%)
Methionine (Met, M)
n = 22 (4.8%)
Proline (Pro, P)
n = 27 (5.9%)
Phenylalanine (Phe, F)
n = 10 (2.18%)
Tyrosine (Tyr, Y)
n = 12 (2.62%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 9 (1.97%)
Glutamine (Gln, Q)
n = 12 (2.62%)
Histidine (His, H)
n = 20 (4.37%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 30 18 10 34 52 7 7 12 0 0 4 4 0 2 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 3 3 11 14 1 1 9 6 0 5 12 10 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
31 19 1 2 14 11 0 1 13 4 8 1 2 1 8 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
16 8 1 0 3 8 2 1 5 5 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
65 173 148 73
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
56 141 75 187
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 209 185 46
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 13 (13.27%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 1 (1.02%)
Leucine (Leu, L)
n = 21 (21.43%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 6 (6.12%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 6 (6.12%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 3 4 0 4 11 3 3 2 0 0 1 0 0 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 4 0 7 2 0 1 1 1 1 1 1 0 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 3 0 3 4 3 0 0 3 1 1 0 0 0 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 2 1 0 1 0 0 0 0 2 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
18 30 26 25
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
14 31 17 37
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 48 35 9
ND5 (size: 1817 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.13%)
Alanine (Ala, A)
n = 50 (8.28%)
Serine (Ser, S)
n = 48 (7.95%)
Threonine (Thr, T)
n = 76 (12.58%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 11 (1.82%)
Leucine (Leu, L)
n = 105 (17.38%)
Isoleucine (Ile, I)
n = 56 (9.27%)
Methionine (Met, M)
n = 29 (4.8%)
Proline (Pro, P)
n = 33 (5.46%)
Phenylalanine (Phe, F)
n = 34 (5.63%)
Tyrosine (Tyr, Y)
n = 13 (2.15%)
Tryptophan (Trp, W)
n = 11 (1.82%)
Aspartic acid (Asp, D)
n = 7 (1.16%)
Glutamic acid (Glu, E)
n = 13 (2.15%)
Asparagine (Asn, N)
n = 21 (3.48%)
Glutamine (Gln, Q)
n = 19 (3.15%)
Histidine (His, H)
n = 15 (2.48%)
Lysine (Lys, K)
n = 20 (3.31%)
Arginine (Arg, R)
n = 8 (1.32%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 35 23 6 38 47 8 6 17 2 1 5 5 0 9 25
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 3 2 6 27 14 3 3 8 19 1 1 18 13 1 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
34 32 1 6 16 14 0 2 10 3 10 1 0 6 15 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 13 0 2 5 20 0 0 4 3 1 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
112 174 214 105
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
67 195 108 235
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 263 236 82
ND6 (size: 519 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (16.28%)
Alanine (Ala, A)
n = 15 (8.72%)
Serine (Ser, S)
n = 9 (5.23%)
Threonine (Thr, T)
n = 2 (1.16%)
Cysteine (Cys, C)
n = 4 (2.33%)
Valine (Val, V)
n = 37 (21.51%)
Leucine (Leu, L)
n = 26 (15.12%)
Isoleucine (Ile, I)
n = 2 (1.16%)
Methionine (Met, M)
n = 6 (3.49%)
Proline (Pro, P)
n = 5 (2.91%)
Phenylalanine (Phe, F)
n = 11 (6.4%)
Tyrosine (Tyr, Y)
n = 7 (4.07%)
Tryptophan (Trp, W)
n = 6 (3.49%)
Aspartic acid (Asp, D)
n = 4 (2.33%)
Glutamic acid (Glu, E)
n = 4 (2.33%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 4 (2.33%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 0 0 5 0 1 0 5 0 0 16 4 8 9 11 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 4 0 4 0 5 6 3 0 5 20 2 0 0 3 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 0 1 3 0 1 2 2 1 5 2 4 15 1 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 3 4 0 0 1 1 0 0 3 0 0 0 1 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
88 15 15 55
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
45 28 18 82
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
74 7 28 64
Total protein-coding genes (size: 11386 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 216 (5.7%)
Alanine (Ala, A)
n = 295 (7.78%)
Serine (Ser, S)
n = 282 (7.44%)
Threonine (Thr, T)
n = 372 (9.81%)
Cysteine (Cys, C)
n = 30 (0.79%)
Valine (Val, V)
n = 165 (4.35%)
Leucine (Leu, L)
n = 696 (18.35%)
Isoleucine (Ile, I)
n = 288 (7.59%)
Methionine (Met, M)
n = 156 (4.11%)
Proline (Pro, P)
n = 226 (5.96%)
Phenylalanine (Phe, F)
n = 209 (5.51%)
Tyrosine (Tyr, Y)
n = 105 (2.77%)
Tryptophan (Trp, W)
n = 107 (2.82%)
Aspartic acid (Asp, D)
n = 63 (1.66%)
Glutamic acid (Glu, E)
n = 92 (2.43%)
Asparagine (Asn, N)
n = 120 (3.16%)
Glutamine (Gln, Q)
n = 93 (2.45%)
Histidine (His, H)
n = 119 (3.14%)
Lysine (Lys, K)
n = 82 (2.16%)
Arginine (Arg, R)
n = 70 (1.85%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
76 212 120 64 198 318 43 55 82 11 30 54 68 13 49 160
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
36 12 18 42 146 95 12 19 74 88 35 28 102 87 9 56
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
163 145 8 35 101 85 4 6 51 26 79 19 18 20 100 24
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
95 79 13 23 40 71 11 5 24 31 10 0 1 5 1 88
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
831 1131 1076 755
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
481 1118 680 1514
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
244 1617 1417 515 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​A​q​u​i​l​a​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ c​h​r​y​s​a​e​t​o​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.