Viewing data for Trionyx triunguis
| Scientific name | Trionyx triunguis |
| Common name | African softshell turtle |
| Maximum lifespan | 50.60 years (Trionyx triunguis@AnAge) |
| Total mtDNA (size: 16590 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6888 | 9702 | 4864 | 2024 | 3840 | 5862 |
| Base content per 1 kb (bases) | 415 | 585 | 293 | 122 | 231 | 353 |
| Base content (%) | 41.5% | 58.5% | ||||
| Total protein-coding genes (size: 11319 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4841 | 6478 | 3575 | 1266 | 2587 | 3891 |
| Base content per 1 kb (bases) | 428 | 572 | 316 | 112 | 229 | 344 |
| Base content (%) | 42.8% | 57.2% | ||||
| D-loop (size: 1078 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 355 | 723 | 256 | 99 | 337 | 386 |
| Base content per 1 kb (bases) | 329 | 671 | 237 | 92 | 313 | 358 |
| Base content (%) | 32.9% | 67.1% | ||||
| Total tRNA-coding genes (size: 1538 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 608 | 930 | 373 | 235 | 391 | 539 |
| Base content per 1 kb (bases) | 395 | 605 | 243 | 153 | 254 | 350 |
| Base content (%) | 39.5% | 60.5% | ||||
| Total rRNA-coding genes (size: 2585 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1060 | 1525 | 645 | 415 | 511 | 1014 |
| Base content per 1 kb (bases) | 410 | 590 | 250 | 161 | 198 | 392 |
| Base content (%) | 41.0% | 59.0% | ||||
| 12S rRNA gene (size: 977 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 415 | 562 | 254 | 161 | 197 | 365 |
| Base content per 1 kb (bases) | 425 | 575 | 260 | 165 | 202 | 374 |
| Base content (%) | 42.5% | 57.5% | ||||
| 16S rRNA gene (size: 1608 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 645 | 963 | 391 | 254 | 314 | 649 |
| Base content per 1 kb (bases) | 401 | 599 | 243 | 158 | 195 | 404 |
| Base content (%) | 40.1% | 59.9% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 294 | 390 | 237 | 57 | 150 | 240 |
| Base content per 1 kb (bases) | 430 | 570 | 346 | 83 | 219 | 351 |
| Base content (%) | 43.0% | 57.0% | ||||
| ATP8 (size: 165 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 59 | 106 | 52 | 7 | 37 | 69 |
| Base content per 1 kb (bases) | 358 | 642 | 315 | 42 | 224 | 418 |
| Base content (%) | 35.8% | 64.2% | ||||
| COX1 (size: 1539 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 669 | 870 | 422 | 247 | 418 | 452 |
| Base content per 1 kb (bases) | 435 | 565 | 274 | 160 | 272 | 294 |
| Base content (%) | 43.5% | 56.5% | ||||
| COX2 (size: 687 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 286 | 401 | 198 | 88 | 153 | 248 |
| Base content per 1 kb (bases) | 416 | 584 | 288 | 128 | 223 | 361 |
| Base content (%) | 41.6% | 58.4% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 366 | 418 | 240 | 126 | 187 | 231 |
| Base content per 1 kb (bases) | 467 | 533 | 306 | 161 | 239 | 295 |
| Base content (%) | 46.7% | 53.3% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 504 | 636 | 365 | 139 | 266 | 370 |
| Base content per 1 kb (bases) | 442 | 558 | 320 | 122 | 233 | 325 |
| Base content (%) | 44.2% | 55.8% | ||||
| ND1 (size: 972 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 423 | 549 | 317 | 106 | 240 | 309 |
| Base content per 1 kb (bases) | 435 | 565 | 326 | 109 | 247 | 318 |
| Base content (%) | 43.5% | 56.5% | ||||
| ND2 (size: 1039 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 409 | 630 | 323 | 86 | 235 | 395 |
| Base content per 1 kb (bases) | 394 | 606 | 311 | 83 | 226 | 380 |
| Base content (%) | 39.4% | 60.6% | ||||
| ND3 (size: 350 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 146 | 204 | 109 | 37 | 86 | 118 |
| Base content per 1 kb (bases) | 417 | 583 | 311 | 106 | 246 | 337 |
| Base content (%) | 41.7% | 58.3% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 598 | 783 | 463 | 135 | 292 | 491 |
| Base content per 1 kb (bases) | 433 | 567 | 335 | 98 | 211 | 356 |
| Base content (%) | 43.3% | 56.7% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 131 | 166 | 103 | 28 | 72 | 94 |
| Base content per 1 kb (bases) | 441 | 559 | 347 | 94 | 242 | 316 |
| Base content (%) | 44.1% | 55.9% | ||||
| ND5 (size: 1779 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 745 | 1034 | 565 | 180 | 406 | 628 |
| Base content per 1 kb (bases) | 419 | 581 | 318 | 101 | 228 | 353 |
| Base content (%) | 41.9% | 58.1% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 216 | 309 | 184 | 32 | 52 | 257 |
| Base content per 1 kb (bases) | 411 | 589 | 350 | 61 | 99 | 490 |
| Base content (%) | 41.1% | 58.9% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%) 
Alanine (Ala, A)
n = 13 (5.73%) 
Serine (Ser, S)
n = 11 (4.85%) 
Threonine (Thr, T)
n = 32 (14.1%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 5 (2.2%) 
Leucine (Leu, L)
n = 59 (25.99%) 
Isoleucine (Ile, I)
n = 23 (10.13%) 
Methionine (Met, M)
n = 10 (4.41%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 5 (2.2%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.32%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 11 (4.85%) 
Glutamine (Gln, Q)
n = 10 (4.41%) 
Histidine (His, H)
n = 4 (1.76%) 
Lysine (Lys, K)
n = 4 (1.76%) 
Arginine (Arg, R)
n = 5 (2.2%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 17 | 9 | 1 | 6 | 42 | 4 | 6 | 10 | 0 | 2 | 0 | 3 | 0 | 1 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 3 | 9 | 1 | 0 | 0 | 2 | 6 | 0 | 1 | 6 | 10 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 14 | 1 | 2 | 2 | 4 | 0 | 0 | 3 | 1 | 1 | 1 | 0 | 1 | 10 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 4 | 0 | 0 | 1 | 4 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 31 | 89 | 83 | 25 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 19 | 70 | 37 | 102 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 78 | 120 | 23 | ||||||||||||
| ATP8 (size: 165 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPNPWLSILLITWLTYITIHQPKIMSFSQTNNITNDPKYQITNPWNWPWT* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 3 (5.56%)
Threonine (Thr, T)
n = 7 (12.96%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 5 (9.26%)
Isoleucine (Ile, I)
n = 7 (12.96%)
Methionine (Met, M)
n = 2 (3.7%)
Proline (Pro, P)
n = 7 (12.96%)
Phenylalanine (Phe, F)
n = 1 (1.85%)
Tyrosine (Tyr, Y)
n = 2 (3.7%)
Tryptophan (Trp, W)
n = 5 (9.26%)
Aspartic acid (Asp, D)
n = 1 (1.85%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 7 (12.96%)
Glutamine (Gln, Q)
n = 4 (7.41%)
Histidine (His, H)
n = 1 (1.85%)
Lysine (Lys, K)
n = 2 (3.7%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 4 | 1 | 0 | 1 | 2 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 4 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 3 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1 | 15 | 25 | 14 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 5 | 17 | 18 | 15 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 1 | 20 | 26 | 8 | ||||||||||||
| COX1 (size: 1539 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 45 (8.79%)
Alanine (Ala, A)
n = 40 (7.81%)
Serine (Ser, S)
n = 34 (6.64%)
Threonine (Thr, T)
n = 41 (8.01%)
Cysteine (Cys, C)
n = 1 (0.2%)
Valine (Val, V)
n = 39 (7.62%)
Leucine (Leu, L)
n = 59 (11.52%)
Isoleucine (Ile, I)
n = 39 (7.62%)
Methionine (Met, M)
n = 30 (5.86%)
Proline (Pro, P)
n = 26 (5.08%)
Phenylalanine (Phe, F)
n = 38 (7.42%)
Tyrosine (Tyr, Y)
n = 19 (3.71%)
Tryptophan (Trp, W)
n = 17 (3.32%)
Aspartic acid (Asp, D)
n = 15 (2.93%)
Glutamic acid (Glu, E)
n = 9 (1.76%)
Asparagine (Asn, N)
n = 15 (2.93%)
Glutamine (Gln, Q)
n = 8 (1.56%)
Histidine (His, H)
n = 20 (3.91%)
Lysine (Lys, K)
n = 9 (1.76%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 23 | 22 | 3 | 6 | 26 | 3 | 21 | 8 | 0 | 5 | 7 | 25 | 2 | 14 | 24 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 8 | 21 | 11 | 0 | 5 | 19 | 14 | 7 | 4 | 6 | 14 | 2 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 18 | 20 | 0 | 5 | 9 | 15 | 0 | 1 | 4 | 4 | 15 | 1 | 0 | 7 | 8 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 15 | 9 | 0 | 5 | 10 | 9 | 0 | 2 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 148 | 100 | 139 | 126 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 136 | 96 | 205 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 186 | 217 | 87 | ||||||||||||
| COX2 (size: 687 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.51%)
Alanine (Ala, A)
n = 11 (4.82%)
Serine (Ser, S)
n = 12 (5.26%)
Threonine (Thr, T)
n = 22 (9.65%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 11 (4.82%)
Leucine (Leu, L)
n = 26 (11.4%)
Isoleucine (Ile, I)
n = 22 (9.65%)
Methionine (Met, M)
n = 17 (7.46%)
Proline (Pro, P)
n = 14 (6.14%)
Phenylalanine (Phe, F)
n = 9 (3.95%)
Tyrosine (Tyr, Y)
n = 9 (3.95%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 9 (3.95%)
Glutamic acid (Glu, E)
n = 14 (6.14%)
Asparagine (Asn, N)
n = 9 (3.95%)
Glutamine (Gln, Q)
n = 7 (3.07%)
Histidine (His, H)
n = 11 (4.82%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.63%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 18 | 13 | 3 | 2 | 13 | 3 | 5 | 5 | 2 | 1 | 2 | 8 | 0 | 2 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 2 | 2 | 6 | 3 | 0 | 1 | 1 | 6 | 0 | 1 | 2 | 11 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 11 | 1 | 0 | 3 | 8 | 0 | 1 | 0 | 2 | 7 | 0 | 0 | 2 | 7 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 13 | 1 | 1 | 8 | 3 | 1 | 0 | 1 | 4 | 1 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 53 | 59 | 75 | 42 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 22 | 58 | 64 | 85 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 81 | 109 | 26 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 20 (7.69%)
Serine (Ser, S)
n = 15 (5.77%)
Threonine (Thr, T)
n = 28 (10.77%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 13 (5.0%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 21 (8.08%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 6 | 7 | 5 | 6 | 17 | 2 | 5 | 7 | 1 | 0 | 8 | 8 | 0 | 4 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 1 | 11 | 7 | 1 | 3 | 6 | 7 | 5 | 0 | 2 | 10 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 17 | 0 | 1 | 1 | 9 | 0 | 1 | 3 | 3 | 8 | 0 | 0 | 0 | 4 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 7 | 1 | 1 | 3 | 1 | 1 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 69 | 70 | 60 | 62 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 71 | 52 | 94 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 99 | 119 | 30 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.86%)
Alanine (Ala, A)
n = 21 (5.54%)
Serine (Ser, S)
n = 25 (6.6%)
Threonine (Thr, T)
n = 33 (8.71%)
Cysteine (Cys, C)
n = 2 (0.53%)
Valine (Val, V)
n = 18 (4.75%)
Leucine (Leu, L)
n = 56 (14.78%)
Isoleucine (Ile, I)
n = 33 (8.71%)
Methionine (Met, M)
n = 20 (5.28%)
Proline (Pro, P)
n = 24 (6.33%)
Phenylalanine (Phe, F)
n = 25 (6.6%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 11 (2.9%)
Aspartic acid (Asp, D)
n = 7 (1.85%)
Glutamic acid (Glu, E)
n = 4 (1.06%)
Asparagine (Asn, N)
n = 22 (5.8%)
Glutamine (Gln, Q)
n = 9 (2.37%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 28 | 19 | 4 | 4 | 36 | 3 | 8 | 9 | 0 | 0 | 4 | 13 | 1 | 2 | 23 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 0 | 15 | 6 | 0 | 2 | 9 | 12 | 3 | 1 | 5 | 16 | 2 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 18 | 11 | 1 | 2 | 8 | 12 | 1 | 0 | 2 | 4 | 11 | 1 | 1 | 1 | 21 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 4 | 0 | 0 | 7 | 9 | 0 | 0 | 1 | 7 | 0 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 99 | 119 | 86 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 49 | 101 | 78 | 152 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 165 | 173 | 28 | ||||||||||||
| ND1 (size: 972 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.95%)
Alanine (Ala, A)
n = 20 (6.19%)
Serine (Ser, S)
n = 30 (9.29%)
Threonine (Thr, T)
n = 28 (8.67%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 9 (2.79%)
Leucine (Leu, L)
n = 57 (17.65%)
Isoleucine (Ile, I)
n = 23 (7.12%)
Methionine (Met, M)
n = 22 (6.81%)
Proline (Pro, P)
n = 24 (7.43%)
Phenylalanine (Phe, F)
n = 22 (6.81%)
Tyrosine (Tyr, Y)
n = 12 (3.72%)
Tryptophan (Trp, W)
n = 8 (2.48%)
Aspartic acid (Asp, D)
n = 5 (1.55%)
Glutamic acid (Glu, E)
n = 11 (3.41%)
Asparagine (Asn, N)
n = 13 (4.02%)
Glutamine (Gln, Q)
n = 6 (1.86%)
Histidine (His, H)
n = 1 (0.31%)
Lysine (Lys, K)
n = 8 (2.48%)
Arginine (Arg, R)
n = 7 (2.17%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 17 | 19 | 3 | 9 | 38 | 2 | 5 | 5 | 1 | 0 | 0 | 9 | 0 | 0 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 3 | 12 | 5 | 0 | 2 | 9 | 4 | 1 | 1 | 10 | 13 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 15 | 0 | 3 | 12 | 13 | 1 | 0 | 1 | 3 | 9 | 1 | 0 | 4 | 9 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 8 | 3 | 1 | 4 | 8 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 90 | 95 | 78 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 101 | 57 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 126 | 157 | 29 | ||||||||||||
| ND2 (size: 1039 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 22 (6.38%)
Serine (Ser, S)
n = 29 (8.41%)
Threonine (Thr, T)
n = 44 (12.75%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 61 (17.68%)
Isoleucine (Ile, I)
n = 31 (8.99%)
Methionine (Met, M)
n = 30 (8.7%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 10 (2.9%)
Tyrosine (Tyr, Y)
n = 9 (2.61%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 20 (5.8%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 22 | 28 | 5 | 9 | 34 | 6 | 7 | 13 | 0 | 0 | 1 | 3 | 1 | 2 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 0 | 3 | 9 | 10 | 0 | 1 | 4 | 7 | 0 | 2 | 5 | 12 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 24 | 0 | 0 | 8 | 17 | 0 | 0 | 4 | 1 | 8 | 1 | 0 | 2 | 18 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 0 | 1 | 13 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 45 | 97 | 142 | 62 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 110 | 68 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 116 | 185 | 35 | ||||||||||||
| ND3 (size: 1039 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 22 (6.38%)
Serine (Ser, S)
n = 29 (8.41%)
Threonine (Thr, T)
n = 44 (12.75%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 61 (17.68%)
Isoleucine (Ile, I)
n = 31 (8.99%)
Methionine (Met, M)
n = 30 (8.7%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 10 (2.9%)
Tyrosine (Tyr, Y)
n = 9 (2.61%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 20 (5.8%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 22 | 28 | 5 | 9 | 34 | 6 | 7 | 13 | 0 | 0 | 1 | 3 | 1 | 2 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 0 | 3 | 9 | 10 | 0 | 1 | 4 | 7 | 0 | 2 | 5 | 12 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 24 | 0 | 0 | 8 | 17 | 0 | 0 | 4 | 1 | 8 | 1 | 0 | 2 | 18 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 0 | 1 | 13 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 45 | 97 | 142 | 62 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 110 | 68 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 116 | 185 | 35 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (4.14%)
Alanine (Ala, A)
n = 27 (5.88%)
Serine (Ser, S)
n = 28 (6.1%)
Threonine (Thr, T)
n = 63 (13.73%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 7 (1.53%)
Leucine (Leu, L)
n = 89 (19.39%)
Isoleucine (Ile, I)
n = 42 (9.15%)
Methionine (Met, M)
n = 34 (7.41%)
Proline (Pro, P)
n = 30 (6.54%)
Phenylalanine (Phe, F)
n = 14 (3.05%)
Tyrosine (Tyr, Y)
n = 13 (2.83%)
Tryptophan (Trp, W)
n = 13 (2.83%)
Aspartic acid (Asp, D)
n = 3 (0.65%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 19 (4.14%)
Glutamine (Gln, Q)
n = 13 (2.83%)
Histidine (His, H)
n = 13 (2.83%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 9 (1.96%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 34 | 32 | 5 | 10 | 58 | 8 | 7 | 12 | 1 | 1 | 2 | 4 | 0 | 4 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 4 | 1 | 19 | 7 | 0 | 0 | 8 | 9 | 2 | 0 | 12 | 17 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 24 | 37 | 0 | 2 | 5 | 15 | 0 | 1 | 5 | 2 | 11 | 2 | 1 | 2 | 17 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 10 | 0 | 1 | 2 | 10 | 0 | 0 | 1 | 7 | 1 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 66 | 146 | 174 | 74 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 51 | 142 | 81 | 186 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 18 | 175 | 236 | 31 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 2 (2.04%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 14 (14.29%)
Threonine (Thr, T)
n = 7 (7.14%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 1 (1.02%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 5 (5.1%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 4 (4.08%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 3 | 6 | 2 | 2 | 16 | 2 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 2 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 3 | 0 | 2 | 4 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 3 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 2 | 0 | 1 | 3 | 6 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 1 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 11 | 37 | 30 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 11 | 28 | 18 | 42 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 38 | 46 | 9 | ||||||||||||
| ND5 (size: 1779 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (4.05%)
Alanine (Ala, A)
n = 39 (6.59%)
Serine (Ser, S)
n = 52 (8.78%)
Threonine (Thr, T)
n = 80 (13.51%)
Cysteine (Cys, C)
n = 6 (1.01%)
Valine (Val, V)
n = 12 (2.03%)
Leucine (Leu, L)
n = 89 (15.03%)
Isoleucine (Ile, I)
n = 51 (8.61%)
Methionine (Met, M)
n = 40 (6.76%)
Proline (Pro, P)
n = 30 (5.07%)
Phenylalanine (Phe, F)
n = 31 (5.24%)
Tyrosine (Tyr, Y)
n = 11 (1.86%)
Tryptophan (Trp, W)
n = 12 (2.03%)
Aspartic acid (Asp, D)
n = 8 (1.35%)
Glutamic acid (Glu, E)
n = 11 (1.86%)
Asparagine (Asn, N)
n = 30 (5.07%)
Glutamine (Gln, Q)
n = 18 (3.04%)
Histidine (His, H)
n = 17 (2.87%)
Lysine (Lys, K)
n = 22 (3.72%)
Arginine (Arg, R)
n = 9 (1.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 38 | 38 | 7 | 14 | 55 | 3 | 9 | 17 | 1 | 1 | 4 | 4 | 3 | 10 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 3 | 3 | 4 | 18 | 17 | 0 | 1 | 4 | 14 | 5 | 5 | 7 | 17 | 1 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 34 | 33 | 1 | 3 | 12 | 25 | 0 | 1 | 11 | 2 | 9 | 3 | 1 | 6 | 24 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 15 | 10 | 1 | 2 | 6 | 20 | 2 | 0 | 3 | 6 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 94 | 153 | 235 | 111 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 63 | 189 | 118 | 223 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 223 | 275 | 72 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.37%)
Alanine (Ala, A)
n = 7 (4.02%)
Serine (Ser, S)
n = 12 (6.9%)
Threonine (Thr, T)
n = 3 (1.72%)
Cysteine (Cys, C)
n = 7 (4.02%)
Valine (Val, V)
n = 35 (20.11%)
Leucine (Leu, L)
n = 24 (13.79%)
Isoleucine (Ile, I)
n = 6 (3.45%)
Methionine (Met, M)
n = 5 (2.87%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 16 (9.2%)
Tyrosine (Tyr, Y)
n = 12 (6.9%)
Tryptophan (Trp, W)
n = 6 (3.45%)
Aspartic acid (Asp, D)
n = 6 (3.45%)
Glutamic acid (Glu, E)
n = 2 (1.15%)
Asparagine (Asn, N)
n = 2 (1.15%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (1.72%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 0 | 2 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 19 | 0 | 3 | 13 | 16 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 7 | 0 | 4 | 0 | 0 | 3 | 9 | 1 | 0 | 15 | 3 | 0 | 0 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 1 | 7 | 0 | 0 | 3 | 2 | 0 | 12 | 0 | 4 | 21 | 2 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 2 | 6 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 7 | 19 | 74 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 23 | 22 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 65 | 2 | 11 | 97 | ||||||||||||
| Total protein-coding genes (size: 11341 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 210 (5.56%)
Alanine (Ala, A)
n = 231 (6.11%)
Serine (Ser, S)
n = 270 (7.15%)
Threonine (Thr, T)
n = 402 (10.64%)
Cysteine (Cys, C)
n = 30 (0.79%)
Valine (Val, V)
n = 160 (4.24%)
Leucine (Leu, L)
n = 608 (16.09%)
Isoleucine (Ile, I)
n = 304 (8.05%)
Methionine (Met, M)
n = 233 (6.17%)
Proline (Pro, P)
n = 218 (5.77%)
Phenylalanine (Phe, F)
n = 207 (5.48%)
Tyrosine (Tyr, Y)
n = 118 (3.12%)
Tryptophan (Trp, W)
n = 106 (2.81%)
Aspartic acid (Asp, D)
n = 62 (1.64%)
Glutamic acid (Glu, E)
n = 86 (2.28%)
Asparagine (Asn, N)
n = 162 (4.29%)
Glutamine (Gln, Q)
n = 103 (2.73%)
Histidine (His, H)
n = 105 (2.78%)
Lysine (Lys, K)
n = 87 (2.3%)
Arginine (Arg, R)
n = 68 (1.8%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 86 | 218 | 200 | 40 | 76 | 349 | 39 | 80 | 97 | 6 | 30 | 28 | 82 | 20 | 60 | 147 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 33 | 12 | 18 | 29 | 123 | 75 | 4 | 24 | 66 | 82 | 38 | 20 | 57 | 133 | 8 | 40 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 164 | 193 | 5 | 27 | 65 | 129 | 5 | 7 | 37 | 35 | 83 | 15 | 24 | 30 | 132 | 22 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 83 | 78 | 8 | 17 | 45 | 83 | 4 | 5 | 9 | 51 | 3 | 1 | 0 | 8 | 0 | 91 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 749 | 998 | 1233 | 799 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 459 | 1077 | 731 | 1512 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 212 | 1351 | 1732 | 484 | ||||||||||||
>NC_012833.1 Trionyx triunguis mitochondrion, complete genome GTCACCGTAGCTTAACACAAAGCATGGCACTGAAGATGCCAAGATGGACATTAACCCGCCCGAGCGACAC AAAGATTTGGTCCTAATCTTAATGTTACTTCTTACTAAACCTACACATGTAAGTATCAGCAAACCAGTGA AAATGCCCCAAAAGTCACACCAGACAATAGGAGCCGGTATCAGGCACGCCATGACAGCCCAAAACGCCTT GCTTCGCCACACCCCCAAGGGTACTACAACAGTGATTAACCTTAAGCAATAAGCCCAAGCTTGACTTAGT TATAGTAAATCTAAACCACAGGGCTGGTAAATCTCGTGCCAGCCACCGCGGTTATACAAGAAGCCCAAAG CAACAACAACACGGCGTAAAATGTGGTTAAACCATAATACCTAATAAACCTAAAGCCAACCCAACACCAA ACTGTCATACGTAAAGTATTAGTCAACCCAATACCAAAAATAGCTTTAGTACAACAGACAACTTGAACCC ACGATCGTTAAGACACAAACTGGGATTAGATACCCCACTATGCTTAACCCTAAACCTAGATACTTCAAAT ACAAAAACATCCGCCAGAAAACTACGAGCAAAACGCTTAAAACTCCAAGGACTTGGCGGTATCTCAAATC CCCCTAGAGGAGCCTGTTCTATAATCGATAATCCCCGCTAAACCTCACCATCTTTTGCCAACACAGCCTA TATACCACCGTCACAGCCTACCTTATGAGAGCCATAAAAGTAAGCCCAACAGCTCAAACAGCTAACAAGT CAGGTCAAGGTGTAGCTAACTAAGGTGGAAGAAATGGGCTACATTTTCTACAATAGAAATCACCACAGAA TAGACTCATGAAATACGATCTAAATTAAAGCAGGATTTAGTAGTAAACTGAGAATAGAGAGCTCAATTTA AAACGGACCTGAGATACGCACACACCGCCCGTCACCCCCATCAATATATGCCCGACCAGCTAAATAAACA CCCAACAAACAAACAGATGGGGTAAGTCGTAACAAGGTAAGTGTACCGGAAGGTGTACTTGGATTACAAA ACATAGCTTAAATACAAAGCATTCAGCTTACACCTGAAACATACCCAATCACAAGGGTTGTTTTGAGCAA ACCATTAGCTCAACTAACCAACCCCAAACCAACAAAACAAATAACCTACACAAACCAAACTAAAACATTA TCCAAAATTCAAGTATAGGCGATAGAAAAATAATTTGAAGCAATAAAAACAGTACCGCAAGGGAAAAATG AAAAAAATGAAATATAACCAAGCAAAAAAAAGCAAAGATTAACCCTTGTACCTCTTGCATTATGATTTAG TCAGAAATACCTGGGCAAAGAGAACTGAAGTCCAAATCCCCGAAACTAAGTGAGCTACTTAAAGGCGGCC AACATTAACCATAAAGCTATCGTCATCTCTGTGGCAAAAGAGTGACAAGACCATTAAGTAGAGGTGAAAA GCCTAACGAACCTAGTGATAGCTGGTTGCTCAATAAAAGAGTATAAGCTCAACCCTAAATATTCCCCCAA ACAACTAAAAGTTACAAGAAATATCTAGGAGCCATTCAATTAGGGCACAGCCAAATTGAAACAGGACACA ACCTAAAATGAAGGACAAAACACCCATCACCAACCTCACGTAGGCCTTAAAGCAGCCACCAATAAAGACC GCGTCAAAGCCCCACCACCACAAATATAAACAACTAATCCACTCCTCAAATAACACTGAGCCATTCTACC CAAATAGAAGAACTAATGCTAAAATGAGTAACAAGAAGACAAACTTCTCTTCTACGCTAGCTTAAACCAG AACAGACAAACTACTGGTTATTAACAGCCAACATAAAAACAACAACACTAAACACAACATATAACACAAA CTGTTAACCCAACACAGGAGCGTAAAACAGAAAGATTAAAACCTGTAAAAGGAACTAGGCAAACAAAGGA CCCGACTGTTTACCAAAAACATAGCCCCCAGCAACTAACCAATATTGGGGGTGATGCCTGCCCACTGACA CTGTTTAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCGTAATCACTTGTCTTTTAAATAAAGACTAG TATGAAAGGCTAAACGAGGCCCTACCTGTCTCTTACAGACAATCAGTGAAATTGATCTCCTCGTGCAAAA GCGAGAATACAAATATAAGACGAGAAGACCCTGTGGAACTTCAAAAAACCATCAATTAACACCATACCCA CCCCAAACTCGGGACCCCAAACTAAAATTAACACCTGAGACATATTTTTGGTTGGGGCGACCTCGGAGTA AAATAAAACCTCCGAAAAAAGAACATAATTCCTTACCTAGAAAAACAACCCAAAGTGCTAACAGCAAAAT GATCCAACCTGTTTGATCAACGAACCAAGCTACCCCAGGGATAACAGCGCAATCCCGTCACAGAGTCCCT ATCGACGACGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAACAGCTATTAAGGGTT CGTTTGTTCAACGATTAAAGTCCCACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTATCT ATAACTAAATCTTTTCCAGTACGAAAGGACCGAAAAGATAAGGCCCACATTAACACCAAGCCTTAAACTT ACATTAGTGACTACAACTGAACTAATAATAAAAATATTACCCACAACCCAAAATACAGGGTTACATTGGG GTGGCAGAGCCAGGTAATAATGCAAAAGACCTAAACCCTTTACCCAGGGGTTCAACTCCCCTTCCCAATT ATGTCCAAACTATTACCAAACCTACTATCCCCCCTAATGTACACAGTACCCATTCTAATCGCCGTAGCCT TCTTCACCCTAATCGAACGAAAAATCCTAGGATACATACAACTACGAAAAGGCCCCAACATCATCGGCCC ATACGGCCTACTACAGCCCGTAGCCGATGGTATAAAACTATTCACAAAAGAGCCCATTTACCCCACAAAC TCATCCCCCACACTATTCATACTCGCCCCAACACTAGCCCTACTACTAGCCCTATCAATCTGACTACCAC TACCAATACCATTCTCACTTGCCGACCTTAACCTGGGCCTACTATTCTTAATCTCAATCTCTAGCTTCAC AGTATACTCAATCATTTGATCAGGCTGATCCTCAAATTCAAAATATGCTTTAATCGGCGCCCTCCGAGCA GTAGCACAAACCATCTCCTACGAAGTAACCCTCGGTATCATCCTCATTTCAATGATCCTGTTCTCCGGAG ACTTCAATACACAAACCTTCACAACTACACAAGAACCAATATTCCTAGCTTTCTCCTCATGACCCCTAAT AATAATATGATATATCTCCACCCTAGCAGAAACAAATCGATCACCATTCGACCTCACAGAGGGCGAATCA GAGCTAGTATCAGGGTTCAACGTAGAATACGCTGCCGGCCCATTCGCATTACTATTCCTAGCAGAATACG CCAACATTCTAATAATAAACACAATAACCTCCATCATATTCCTAGGCTCCTCCCCCATAAACAACCCACC AGAACTACTCACCATAACTACAATTATAAAAACCATACTACTATCTACAGGATTCCTATGGGTACGAGCC TCGTACCCTCGATTCCGATATGACCAACTAATATTCTTACTCTGAAAAAATTTCCTCCCAATCACACTAT CTCTATGCCTATGACACACCTCCATACTCACCACTTTCGCCGGACTACCACCCATACTTTAAGGACACGT GCCTGAATAATAGGATTACCTTGATAGGGTGAACAATAGAGGTTCAAACCCTCTCGTCTCCTTAGAAAAA TAGGACTCGAACCTACACCTAAGAGATCAAAACTCCTTATACTTCCATTATACTACATCCTAGTAAAGTC AGCTAATTAAGCTTTTGGGCCCATACCCCAAAAATGTTGGTTTAAACCCCTCCTCTACTAATGAACCCAC ATGCAAACATAATCATTATTTCAAGCCTGATCCTAGGCCCAGTAATCACAATCACAAGCAACCATTGAAT TATAGCATGAGTAGGCCTAGAAATCAATATACTAGCAATCATCCCACTTATCGCCAAACAACACCACCCA CGAGCAATCGAAGCCCCTATCAAATACTTCCTAACACAAGCATCCGCTTCATCACTGCTCTTATTCTCAG TCATCAACAACGCTTGAGACTCAGGACAATTCAACACCTCACAACTATCCAACACCACATCATGTGTAAT AATTACCACTGCCCTAGCAATAAAACTAGGACTAGCCCCATTTCACTACTGACTGCCAGAAACCCTACAA GGAACTACAACAATAATAACCCTAATCCTCACAACATGACAAAAACTAGCCCCACTATCACTTCTAATAA TAATCAACCAATCCCTAAACACACTACTTCTGACCACACTTAGCCTACTGTCCATCCTAATCGGAGGCTG AGGTGGACTAAACCAAACCCAACTCCGAAAAATTATAGCCTTCTCCTCAATCGCTCACCTGGGATGAATA TCCCTAATTCTAACCCTATCAACTAAACTCACAATATTAACATTTTACACATACGTGTCCATAACTGCAA CAATACTCTTAATAATTAAACTACTAGAAACTAACAAAATATCAACAATAATAACATCATGGACAAAACT ACCCATACTCAACTCCATAATAATACTAAACTTAATATCATTAGCAGGCCTACCCCCCTTAACAGGATTC ATACCAAAATGACTAATCCTACAAGAACTAACCAAAAACAATATAACAACTATCGCAACCCTAACAGCCA TTTTCTCACTACTCAGCTTATTCTTCTACCTACGAATCGCATATTACTCAACCATCACACTACCACCAAA CACAAACAACTACTCACAACAATGACGCCACAAAACTAACCAAAAACCTTACCTACCCCCAATAATCACC ATATCAGCCCTCCTCGCCCCAATCATGCCCACCCTTACAACAATTATATAGAAACTTAGGATAATGCTAC AAACCAGGGGCCTTCAACCCCCCAAATAAGAGAAAAACAACTCTTAGTTTCTGTGATAAATATTTAAGAC CTGTAAGACTCTACCTTACATCTCCTGAATGCAACTCAGACACTCTAATTAAGCCAAGGCCTCACTAGAC AAATGGGTCTCGATCCCATAAATAATTTAGTTAACAGCTAAACACCCAATCCAGCGGGCTTTTGCCTAAA AATTTTTCCCGCTATAAAATAAAGCGGGAAAACCAAGACACCACTTACAGTGTATCTCCAAATTTGCAAT TTAGCGTGAATTTCACTACAAGGCTTGATAAGAAGGGGAGTTAAACCCCTGTAAAAAGGTTTACAGCCTA ACGCCTATCTCAGCCATCTTACCAGTGATTTTAACCCGTTGACTATTCTCCACCAACCATAAAGACATCG GCACCCTCTACTTAATTTTTGGGGCCTGAGCAGGTATGGTCGGCACAGCCCTAAGCCTATTAATCCGAGC AGAATTAAGCCAACCTGGCACCCTCCTAGGAGATGACCAAATTTACAATGTAATTGTCACAGCACATGCC TTTGTCATAATTTTCTTCATGGTCATGCCTGTAATAATCGGCGGCTTTGGTAACTGACTAGTACCACTAA TAATTGGGGCCCCCGACATGGCATTCCCACGAATAAACAATATAAGTTTCTGATTACTACCACCATCCTT ACTGCTACTCCTAGCATCATCAGGCATTGAAACAGGTGCAGGCACTGGTTGAACCGTATACCCCCCATTA GCCAGCAACCTAGCCCATGCTGGCGCATCAGTAGACTTAACCATCTTCTCCTTACACCTAGCTGGAGTAT CCTCAATCCTAGGGGCTATCAACTTCATCACCACAGCAATCAATATAAAATCCCCCACAATATCACAATA CCAAACCCCATTATTTGTTTGATCAGTCGTAATTACAGCTGTATTACTACTCTTATCTCTACCAGTATTA GCTGCTGGAATCACAATACTACTTACCGACCGAAACTTAAATACAACCTTCTTCGACCCCTCAGGCGGAG GAGACCCAGTATTATACCAACACCTGTTTTGATTCTTTGGCCACCCAGAAGTATACATCCTCATCCTACC AGGGTTTGGCATAATCTCCCATGTAGTAACATATTACGCCAACAAAAAAGAACCGTTTGGCTACATAGGC ATAGTCTGAGCAATGATATCCATTGGATTCTTAGGATTCATCGTCTGAGCCCACCACATATTCACCGTTG GAATGGACGTAGATACACGAGCCTATTTCACATCAGCCACAATAATTATCGCCATTCCAACAGGGGTAAA AGTATTCAGCTGACTAGCCACACTACACGGAGGCCTTATCAAATGAGACGCTGCCATACTATGGGCCTTA GGCTTCATCTTTTTATTCACAATCGGAGGATTAACAGGCATCGTACTGGCCAACTCATCACTAGATATTG TATTACACGATACATACTATGTTGTAGCCCACTTCCACTATGTGTTATCAATGGGGGCCGTATTTGCCAT TATAGCCGGATTTACCCACTGATTCCCGCTCTTCTCCGGCTACTCACTACACCAAACCTGAACTAAAGTA CACTTCGGAGTTATATTTGCAGGGGTAAATATAACTTTTTTCCCACAACACTTCCTAGGTCTTGCCGGCA TACCACGACGTTACTCTGACTACCCTGATGCTTACACCCTATGAAATTCTGTTTCATCTATCGGATCTAT GATCTCCCTAATTGCAGTAATCATAATAATATTTATTATTTGAGAAGCCTTCTCATCAAAACGAAAAATC ACAACAATCGAACTAACAACCACCAATGTAGAATGACTACATGGCTGCCCCCCTCCATACCACACCTACG AAGAACCCACCCACGTACAATAACACAAGAAAGGAAGGATTTGAACCCCCTAAAGTTAGTTTCAAGCCAA CCACATGACCTACATGTTTCTCTCTCAAGACGTTAGTAAACACATTACATAGCTTCGTCATAGCTAAATT ATAGGTTTAACCCCTTTACGACTTAATGGCCCATCCCCTCCAACTAGGATTTCAAGACGCAATATCACCA ATCATAGAAGAACTACTACACTTCCATGACCATACATTAATAATTGTATTCTTAATCAATACTATAGTAC TTTACATCATCACCACAATAATAACAACAAAACTAACACACACTAATACTATAAACGCTCAAGAGGTAGA AATCATTTGAACAATTCTCCCAGCCATCGTCCTAATCACCATCGCACTTCCTTCCCTACGCGTCCTGTAC CTAATAGACGAAATCAACAACCCATACCTAACCATCAAGGCCATGGGCCACCAGTGATACTGAACATATG AATACACCGACTACGAAAACCTAGAATTCGACTCATACATAATCCCAACCCAAGACCTAACAAAAGGACA CTTCCGACTATTAGAAGTAGACCACCGAATAGTAATCCCAATAGAATCCCCAATCCGAATGCTAATTTCA GCCGAAGACGTTCTGCACTCATGAGCAATGCCATCATTAGGTGTAAAAACAGATGCCATCCCAGGACGGC TGAACCAAACAACCTTTACCACGACACGACCAGGAATCTTCTATGGACAGTGCTCAGAAATCTGCGGAGC TAACCACAGTTTCATACCAATCGTAGTAGAATCAATCCCCCTTAACCACTTCGAAGCCTGATCCTCACTA ATATTACCATAAACACTACAGAAGCTAAACTGGACAGCACTAGCCTTTTAAGCTAGAGAAGAGAAATGAC CAACTCTCCTTAGTGACATGCCACAACTCAACCCCAACCCTTGATTATCCATCCTACTAATTACATGATT AACCTACATCACAATTCACCAACCAAAAATCATATCATTCTCACAAACAAACAACATTACCAATGACCCT AAATACCAAATCACCAACCCATGAAATTGACCATGAACTTAACAATTTTCGACCAATTCCTGAGCCCACA AATCCTAGGACTATCATTAATAACACTAGCTATCATCACACCACCAATAATCTTCCCAACCCAAAACAAC CGATGACTAACCAACCGCTTATCTGCCCTACAACTACTAATAATTAACACAATCACAAAACAATTAATAC TACCAATCAATAAACCAGGACATAAATGGGCCATCACCCTAACATCACTAACAACCCTACTACTAACCAC CAACCTACTCGGACTCCTACCTCACACATTCACTCCAACCACCCAACTATCTATAAACATAGCCCTAGCC GTACCCCTCTGATTAGCTACCATCCTTACAGGCCTACGAAACCAACCAACAAAATCACTAGGACATCTAC TACCAGAAGGCACACCCATCCCCCTAATTCCAACCCTCATTATCATTGAAACCATCAGCCTACTAATTCG ACCCTTAGCCCTGGGAGTTCGACTAACAGCCAACCTCACAGCCGGACATCTACTAATCCAACTAATCTCC ACCGCCACTATCACCCTAATACCCACATCACCCATACTATCCCTACTAACCCTGACCATCCTCCTGCTAC TAACGCTACTAGAACTAGCTGTTGCCATAATCCAAGCATATGTATTTGTACTACTACTAAGCCTATACCT ACAAGAAAACATCTAATGGCCCACCAAACACACGCCTACCACATAGTAGACCCAAGCCCATGACCACTCA CCGGAGCGACAGCAGCACTACTACTAACTTCAGGACTTGCCATATGATTCCATTATGGTTCAACAACACT AATAGTCCTTGGCCTACTAACTACACTCCTAACAATACTGCAATGATGACGAGACATTGTACGAGAAAGT ACATTCCAAGGACACCACACCATGCCAGTCCAAAAGGGGCTACGATATGGGATAATCCTATTCATCACAT CAGAAGTATTCTTCTTCATTGGCTTCTTCTGAGCATTTTACCACTCAAGCCTTGCCCCAACCCCCGAACT AGGGGGTTGCTGACCACCAACCGGGGTCCAACCCCTCAACCCATTTGAAGTCCCACTATTAAACACAGCA GTCTTATTAGCCTCAGGAGTAACAATCACCTGAGCCCACCACAGCCTAATAGAAGCCAACCGAAACCAAT CAACACAAGCCCTCACCCTTACCGTCATCCTAGGGTTATACTTCACAGGCCTCCAGGCTATAGAATACTA CGAAGCACCATTCACAATTGCCGATGGAATTTATGGCTCAACATTCTTCGTAGCAACAGGCTTCCACGGT CTCCATGTAATTATTGGCTCAACATTCCTACTAGTCTGCCTACTGCGACTAATTAAATCTCACTTCACAA CCACCCACCACTTCGGATTTGAGGCCGCCGCATGATACTGACACTTTGTAGACGTAGTCTGATTATTCCT TTACATCTCCATCTACTGATGAGGATCATACTTTTCTAATACAACCAGTATAAATGACTTCCAATCATTC AATTTCAGCTAAAACCTGAAGAAAAGTAATGAACACAACAACCTCACTCTTCACCTTATCACTAATCATT TCAATCCTCTTAGTTATACTTAACAACCAATTAGCAATGATAAAACCAAACAAAGAAAAACTATCTCCAT ACGAATGCGGATTTGACCCGATAAAAACTATCCGCCTGCCATTCTCCATCCGATTTTTCCTCAGTAGCAA TCCTATTCCTACTATTCGACCTAGAAATCGCACTGCTCCTACCACTCCCATGAGCCACCCAACTAACCAC ACCAATACACACCCTAACATGAACCTTTACCATCCTACTCCTCCTGACACTAGGCTTCATCTATGAATGA ACCCAAGGAGGACTAGAATGGGCAGAATGAGCGGCTAATTTAATTTAAAATAACTAATTTCGACTTAGTC AACCATGATTATAAACCATGGCCACTCTATGACCCCACTACACTTTAGCTACTCCACAGCATTTATAATC AGCATAACAGGCTTCATGCTCCACCGGACTTCCCTTATCTCAACCCTACTATGCCTAGAAAGCATAATAC TATCACTATTCATTGCCCTAGCACTACACCCAATCCAACTACAAACCCCGTCATTCATACTAAACCCCAT ACTAATTCTATCATTCTCTGCATGCGAAGCCAGCCTGGGCCTATCCCTACTAGTAGCATCATCACGAACC CACAACCCAAACAACCTGCAAAACCTTAATCTCCTACAATGCTAAAAATCCTAATACCAACAATCGCATT AATCCCCACCATCACACTATGCAAACCAACACAACTATGATACACCACATTAACCCACAGCATACTAATT TCACTCCTAAGTCTACAACTATTAAACCCGCCACTATACCCAACCATAAACCTCTCAAACCCAAACCTAG CAACAGACCAAGTATCTACACCCCTAATCATCCTATCATGCTGACTCACCCCCCTAATAATTCTGGCCAG CCAGAACCACCTGTCAACAGAACCCCTACCACGAAAACGAACATTTATCACTACCGTAATCCTACTTCAA ACACTACTTATCATAACATTCTCAGCCACAGACCTAATAATATTTTTCGTATTATTTGAAGCCACACTAA TCCCCACACTAATGATAATCACACGGTGAGGAAATCAAATAGAACGACTAAACGCCGGAACCTACTTCTT ATTCTACACACTTATTGGATCCCTACCCCTACTCATTGCCCTACTATCACTGTACTCTAACACAAACTCA CTCTCAATACCAACAATACAACTAAACCCACCAACAATAACAAACACATGAACAAACTCAATATGACTAC TAGCCGCACTAACCGCATTCATAATCAAAATACCACTATATGGCCTACACCTATGACTACCAAAAGCACA TGTCGAAGCCCCCATCGCAGGATCAATAATCCTAGCCGCCATCCTACTAAAACTAGGGGGCTACGGAATT ATCCGAATCATAATAACCACCGCCCTAACATTTAAAACACCCTACTACCCATTCATAATCCTAGCACTCT GAGGCATTATCATAACAGGCCTAATCTGCTTACGCCAAACTGATCTAAAATCACTAATCGCTTACTCATC CGTTAGCCACATAGGCCTCGTAATCGCCGCCACACTTACACAAACAGAATGGGCCTACACAGGGGCCATC ACCATCATAATCGCCCACGGCCTTACATCATCCATACTATTCTGCCTAGCCAACACAAACTACGAACGAA TCCATAGCCGAACACTACTACTAACCCAAAACATACAACTACTACTACCACTAATAGGCACATGGTGACT AATCGCCAGCCTGACCAACATAGCCTTGCCCCCAACCATTAACCTCATAGGAGAACTGACCATCATTACC TCACTATTCAATTGATCCCACCCCACAATCATCCTCACAGGACTGGGAACCCTAATCACCGCCACCTATA CCCTACACATATTCTCCTCAACCCAATGAGGAGAACTGCCACAACACATAAAAACCATCACACCAACCCA CACACGAGAACACCTAATCATAACCCTACACGTCCTGCCCATAATATTACTCACACTAAAACCAGAACTA ATCTGAGGCCCCTTCAACTGTTCATATAGTTTTAAACCAAACATTAGACTGTGGCTCTAAAAATAGGGGT TTAAACCCCCTTATAAACCGAGAAAGTAATAATAGAAACTGCTAATTACTATTACCTGAGATTAAATTCA CAGCTTCCTCACTTTTAAAGGATAACAGCAATCCGCTGGCCTTAGGAGCCACACCCCCTTGGTGCAACTC CAAGTGAAAGTAATGACAACACTTTTCAACTCAATACTACTACTATCACTTCTAACTCTTACCCTACCAC TCATAACACCACCACTAAATATAAAACCAAAGACCGCTGTAAAAATAACATTCTTCATCAGCCTAATCCC TCTAACCATGTACATTTACTCCAACACCGAATCCATTGTCACCAACTGGTCCTGAACTATAACCTCAACA TTCACAATATCAATAAGCTTTAAGTTTGATCAATACTCTATCATATTCATCCCAGTGGCCCTATACGTAA CATGGTCCATCCTAGAATTTACCCACTGGTACATAGCACCTGACCCCCACATCACAAAATTCTTCAAATA CCTACTAACCTTTCTTATAGCCATAATAACATTAGTCACTGCCAACAATATATTTCAATTCTTTATTGGG TGAGAAGGCGTGGGAATCATATCCTTCCTTCTAATCGGCTGATGATTCAGCCGATTAGAAGCATGCTCAT CAGCCCTACAGGCCATCATCTATAACCGCACCGGAGACATCGGACTAATCCTAAGCATAGCCTGATTATC AACAAACCTAAACTCATGAGAACTACAACAAATCTTCTCTAGCACCAACCCTACTCCACTACTACCCCTC ATCAGCCTCATCATCGCAGCCACTGGAAAATCAGCCCAATTCAGCCTCCACCCGTGATTGCCAGCAGCAA TAGAGGGCCCCACCCCAGTCTCAGCCCTACTACACTCCAGCACTATAGTTGTAGCAGGGATTTTTTTATT AATCCGAATACATCCAATACTCTCAACAAACGATACAGCCGCCTCAATTTGCCTATGTCTGGGAGCCCTC ACCACACTATTTACAGCTATCTGTGCAACCACTCAAAATGACATCAAAAAAATCATTGCTTTCTCCACCT CAAGTCAACTAGGACTAATAATAGTAACCATCGGACTTAATCAACCCCAACTAGCCTTCCTACACATCAC AATACACGCCTTTTTTAAAGCAATACTCTTCCTCTGCTCCGGTTCAATCATCCACAACCTAAATAACGAA CAAGACATTCGAAAAATAGGGGGACTACACAAATCCCTCCCAATCACCTCATCATGTATAACTATCGGAA ACCTATCCCTTTCAGGGATTCCATTCCTAACCGGATTCTACTCTAAAGACACCATCATCGAAACCATAAC CACATCCCACACAAACGCCTGAGCCCTACTCCTAACATTAACTGCAACATCCCTAACTGCAGCCTACAGC CTACGAATCACAATTCTAGTGCAAGCAGGACAACCACGCTTCCAACCCATACACCCCATTAACGAAAACC GCCCAACCAACACCAATCCTATCATCCGACTAGCAGCAGGAAGCATTATCGCAGGACTATTAATCTCATC AAACACAGTCACAACAAACCCCACACAAATAACCATACCACACCATATAAAAACATCAGCACTAACCATA ACAATCCTGGGGTTAATCCTAGCCGCAGAACTAATTACAATAACCAACAAAACCACAAAACCATCAAAAA CCCACACCCTATCAAACCTACTAATACACTTCAACACCCTACTACACCGATCACTGCCAATATTAAACCT AAAATTCAGCCAAAACACCGCAACTCACCTAACAGACCTAACCTGATATGAAAACACAGGACCAAAACTA ATAACAAAACTACAAACTGCTCCTATTACAATAACCTCAACACAAAAAGGCCTAATCAAAATATACCTCA CGTCATTCCTACTAACCATCACCATACTCCTCCTCATCTAATAGAACGAATCACCCCTCAGGTCAAACCA CGAACCAAATCCAACACAACAAACAACGTCAACAACAAACCCCAACCAGCAACCAAAAACACCACACAAC CATAATAATAAAACCACGACACCCCAACACAATCTACACGAACATTAAACAAACCACCAGCATCAACCAC AACATCCCCATACCCCTCTAAACTTCATATACCATAACAAACTACAACCCCACCAAAAACCAACAAAAGA TACCCAACCATACAAGACAAATTCGAATAATCACACCAAGCAACAGGATACGAATCCCCTGTCAACGCCA CAGAATACGCAAAAACCACCAACATCCCCCCCAAATAAACCAAAAACAACACCAAAGAAATAAAAGACCC CCCCAACCCAATCAACACTAAACACCCAAACACCGCCCCAAACACCAAACCAACAACCCCATAATAAGGA GAAGGGCCAGAAGCTACACTAACAACCCAAAAAACAAAACAAATCTCAAATATAAAAATAAAAAACACCA TTATTCTTGCCTGGACTTCAACCAAGACTAATGATTTGAAAAACCACTGTTGTATTCAACTACAAAAACC CAATGGCCATCAACTTACGAAAATCTCACCCAATAATCAAAATCATTAACAACTCACTAATTGACCTCCC TAGCCCACCCAACATCTCCATTTGATGAAACTTCGGATCCCTATTAGGCACCTGTCTAACCCTGCAAATC ATCACAGGATTATTCCTAGCCATACACTACTCACCAAACATCTCCACAGCATTCTCATCAGTAGCCCACA TCACCCGAGACGTACAATACGGCTGACTAATCCGCAACACCCATGCCAACGGAGCCTCACTATTCTTCGC ATGCATCTACCTACACATCGGACGAGGCATATACTATGGTTCATACCTATACAAACAAACCTGAAACACT GGCGTAATCCTACTAATACTAACCATAGCCACCGCATTCATAGGATACGTACTACCATGAGGGCAAATAT CCTTCTGAGGGGCCACCGTAATCACAAACCTACTATCAGCCGTCCCCTATATCGGCACCACAATAGTACA ATGGGTCTGAGGAGGCTTCTCCGTAGACAATGCCACCCTAACACGATTCTTCACCATACACTTCCTACTT CCATTCATAATCGCAGGAATAACCATAGTACATCTACTATTCCTACACGAAACTGGATCAAACAACCCAA TAGGACTTAACTCAAACACAGACAAAATCCCGTTCCATCCCTACTTCTCATACAAAGACCTACTGGGCCT AACTGTAATACTAACCACACTACTATCTATCGCCATATTTTACCCAAACCTATTGGGGGACCCAGACAAC TTCACGCCAGCCAACCCACTATCCACCCCGCCCCACATCAAACCAGAATGATACTTTCTATTCGCATATG CCATCTTACGATCAATCCCAAACAAATTAGGCGGAGTCCTAGCCTTACTACTATCCATCCTAGTGCTATT CACCCTCCCCATAGTCCACACATCAAAACAACGAACACTTACCTTCCGACCAATCACCCAAACCTTATTC TGACTATTCGTAGCCAACCTAATAGTACTGACATGAATTGGAGGTCAACCAGTAGAAAACCCATTCATTC TTATCGGACAAACAGCCTCCATCCTCTATTTCCTAATCTTACTCGTACTAATACCAATCTCGGGCATAAT CGAAAACAAAGCAATCAGCTAAAACACTTCAGTAGCTTAAACAACAAAGCATTGGTCTTGTAAACCAAAG AATGAAGAACCCCAATCCTCCTGAAGTACAATACGCCCAAAAGTCAAAAGAAAAGGACTACAACCTTCTT CCCCGATCCCCAAAACCGGAATTTTAATTAAACTATCTTTTGCTCTCTCCCGCGCACAAGAGAAAACTTC CCCCCCCCCCCCCATGTACTATTGTACATTCACCTATCTACCACAAGCATATCACCAGTAATATTTATGT AATCCGTACTGAATACATTAAATGATTAATTTTACATAACTGTACTAGAACATGCATATAAGCAAGGAAA TAAATCCATGACATCGGACACACTTATTCAAAATTATTCTACACCATGAATATCGTCACAGTCCTTGACA TCTATTGGTCTAGCAACTCACGAGAAATAAGCAATACTTGTTAGTAAGATACTCCATTACCAGTTTCAAG CCCATTTAAAGTTGGCGTACATAACTGATCTATCCTGGCATTTGGCTGTTTTTTCAAGCACATGCACTGT TGAAGTTCATATCATTATCTTTAAAAGGCCAACGGTTGATGTGTTCTATACATTAATCTGGCCATCAGAC ATACCTGGTTTAGTACATATAGTAGTTCTCTTTTCTCTCTGTGTTCTCAGGCCCACAATACTGATACCTG CCAAATAACTGAAACTGGACTTACGTTCAATATTAATTACCTTACATAATTACTAAACAGGTGTTATTAA TTAATGCTCGAAAGACATATAAATTCCAAAACACATTACCAACCAAAAACCACTCAACAAACCACTTTAA GTTAAACCCCCCTACCCCCATTAAGCTAGCACTAACCCGCATAATCACCTATTCTCGTCAAACCCCAAAA TCCGAGAATGATTATACTGATATAACACTAACCCTGTGAGCAACAAATAAATTAAAAACTCACATTATAT ACATATATATTTTAAACAACTAAACACACTACCCCATAATACAGTACACCAAACACACCTAACTATTGCG CAGTCCAATACATACACCAAAAAACTACACCCATCTATATATCTATATATCTATATATCTATATATCTAT ATATCTATATATCTATATATCTATATATCTATATATCTATATATCTATATATCTATATATCTATATATCT ATATATCTATATATCTATATATCTATATATCTATATATCTATATATCTATATATCTATACCCACTGCTAC
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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