Stats for family Lamnidae

Species in family:
Carcharodon carcharias
Isurus oxyrinchus
Lamna ditropis
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Stats for total mtDNA (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Isurus oxyrinchus 43.2 56.8 4681 2539 4668 4813 25.0
Lamna ditropis 41.8 58.2 4518 2466 4771 4944 20.0
Carcharodon carcharias 40.8 59.2 4498 2326 4801 5119 50.0
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Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 43.0 57.0 3353 1553 3305 3191 20.0
Carcharodon carcharias 41.7 58.3 3320 1438 3331 3317 50.0
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Stats for D-loop (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Isurus oxyrinchus 38.3 61.7 246 161 344 313 25.0
Lamna ditropis 37.7 62.3 235 166 352 312 20.0
Carcharodon carcharias 35.0 65.0 246 144 362 363 50.0
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Stats for total tRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Isurus oxyrinchus 39.9 60.1 343 275 430 502 25.0
Lamna ditropis 39.3 60.7 340 269 433 508 20.0
Carcharodon carcharias 39.8 60.2 346 270 426 507 50.0
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Stats for total rRNA-coding genes (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Isurus oxyrinchus 40.4 59.6 583 478 659 909 25.0
Lamna ditropis 40.0 60.0 582 470 665 914 20.0
Carcharodon carcharias 39.6 60.4 575 465 669 918 50.0
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Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 43.0 57.0 206 88 202 188 20.0
Carcharodon carcharias 39.9 60.1 202 71 207 204 50.0
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Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 32.7 67.3 41 14 50 63 20.0
Carcharodon carcharias 35.1 64.9 44 15 44 65 50.0
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Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 43.8 56.2 409 271 475 399 20.0
Carcharodon carcharias 43.1 56.9 402 268 479 405 50.0
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Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 43.0 57.0 178 119 194 200 20.0
Carcharodon carcharias 40.4 59.6 173 106 202 210 50.0
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Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 44.4 55.6 220 129 227 210 20.0
Carcharodon carcharias 43.1 56.9 214 125 227 220 50.0
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Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 44.2 55.8 356 150 342 297 20.0
Carcharodon carcharias 43.5 56.5 352 146 344 304 50.0
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Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 42.5 57.5 286 128 296 265 20.0
Carcharodon carcharias 41.9 58.1 289 120 292 274 50.0
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Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 44.9 55.1 349 119 286 289 20.0
Carcharodon carcharias 41.8 58.2 331 105 306 302 50.0
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Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 45.3 54.7 100 58 117 74 20.0
Carcharodon carcharias 42.7 57.3 102 48 112 89 50.0
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Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 42.3 57.7 409 175 403 394 20.0
Carcharodon carcharias 41.3 58.7 407 164 401 409 50.0
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Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 40.7 59.3 85 36 100 76 20.0
Carcharodon carcharias 38.4 61.6 81 33 105 78 50.0
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Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 41.9 58.1 552 215 526 537 20.0
Carcharodon carcharias 41.0 59.0 557 194 528 551 50.0
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Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Lamna ditropis 42.0 58.0 166 53 94 209 20.0
Carcharodon carcharias 41.4 58.6 171 45 90 216 50.0
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Stats for 12S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Isurus oxyrinchus 43.3 56.7 229 185 224 319 25.0
Lamna ditropis 43.0 57.0 230 182 225 321 20.0
Carcharodon carcharias 42.3 57.7 225 179 230 322 50.0
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Stats for 16S rRNA gene (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Isurus oxyrinchus 38.7 61.3 354 293 435 590 25.0
Lamna ditropis 38.3 61.7 352 288 440 593 20.0
Carcharodon carcharias 38.1 61.9 350 286 439 596 50.0
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.