Stats for family Suidae
| Stats for total mtDNA (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
39.5 |
60.5 |
4214 |
2372 |
4478 |
5629 |
22.0 |
| Sus scrofa |
39.5 |
60.5 |
4353 |
2202 |
4292 |
5766 |
27.0 |
| Sus barbatus |
39.2 |
60.8 |
4296 |
2162 |
4287 |
5735 |
16.2 |
| Phacochoerus africanus |
39.2 |
60.8 |
4340 |
2222 |
4371 |
5786 |
20.9 |
| Sus verrucosus |
39.0 |
61.0 |
4286 |
2144 |
4299 |
5750 |
17.0 |
| Stats for total protein-coding genes (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
39.6 |
60.4 |
3020 |
1472 |
3116 |
3734 |
22.0 |
| Sus scrofa |
39.7 |
60.3 |
3151 |
1353 |
2979 |
3858 |
27.0 |
| Sus barbatus |
39.6 |
60.4 |
3140 |
1355 |
2993 |
3852 |
16.2 |
| Phacochoerus africanus |
39.4 |
60.6 |
3122 |
1352 |
3013 |
3855 |
20.9 |
| Sus verrucosus |
39.5 |
60.5 |
3132 |
1341 |
3004 |
3858 |
17.0 |
| Stats for D-loop (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Sus scrofa |
40.9 |
59.1 |
310 |
170 |
299 |
396 |
27.0 |
| Phacochoerus africanus |
42.2 |
57.8 |
340 |
198 |
325 |
413 |
20.9 |
| Sus verrucosus |
38.5 |
61.5 |
269 |
134 |
275 |
369 |
17.0 |
| Stats for total tRNA-coding genes (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
37.4 |
62.6 |
322 |
239 |
411 |
527 |
22.0 |
| Sus scrofa |
37.2 |
62.8 |
322 |
238 |
415 |
532 |
27.0 |
| Sus barbatus |
37.3 |
62.7 |
323 |
239 |
416 |
529 |
16.2 |
| Phacochoerus africanus |
37.2 |
62.8 |
327 |
234 |
412 |
536 |
20.9 |
| Sus verrucosus |
37.0 |
63.0 |
320 |
238 |
421 |
531 |
17.0 |
| Stats for total rRNA-coding genes (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
38.4 |
61.6 |
535 |
439 |
607 |
954 |
22.0 |
| Sus scrofa |
38.9 |
61.1 |
554 |
430 |
589 |
958 |
27.0 |
| Sus barbatus |
38.4 |
61.6 |
547 |
424 |
591 |
969 |
16.2 |
| Phacochoerus africanus |
38.0 |
62.0 |
536 |
428 |
611 |
960 |
20.9 |
| Sus verrucosus |
38.4 |
61.6 |
548 |
423 |
589 |
969 |
17.0 |
| Stats for ATP6 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
40.7 |
59.3 |
199 |
78 |
186 |
218 |
22.0 |
| Sus scrofa |
38.5 |
61.5 |
192 |
70 |
187 |
232 |
27.0 |
| Sus barbatus |
39.6 |
60.4 |
198 |
72 |
181 |
230 |
16.2 |
| Phacochoerus africanus |
38.2 |
61.8 |
191 |
69 |
190 |
231 |
20.9 |
| Sus verrucosus |
38.9 |
61.1 |
197 |
68 |
180 |
236 |
17.0 |
| Stats for ATP8 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
30.4 |
69.6 |
44 |
18 |
60 |
82 |
22.0 |
| Sus scrofa |
31.9 |
68.1 |
50 |
15 |
56 |
83 |
27.0 |
| Sus barbatus |
32.4 |
67.6 |
50 |
16 |
56 |
82 |
16.2 |
| Phacochoerus africanus |
28.9 |
71.1 |
47 |
12 |
58 |
87 |
20.9 |
| Sus verrucosus |
32.4 |
67.6 |
50 |
16 |
56 |
82 |
17.0 |
| Stats for COX1 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
41.2 |
58.8 |
359 |
278 |
471 |
437 |
22.0 |
| Sus scrofa |
41.4 |
58.6 |
384 |
256 |
452 |
453 |
27.0 |
| Sus barbatus |
41.4 |
58.6 |
381 |
258 |
454 |
452 |
16.2 |
| Phacochoerus africanus |
41.2 |
58.8 |
381 |
255 |
448 |
461 |
20.9 |
| Sus verrucosus |
41.2 |
58.8 |
382 |
255 |
454 |
454 |
17.0 |
| Stats for COX2 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
39.4 |
60.6 |
174 |
97 |
184 |
233 |
22.0 |
| Sus scrofa |
38.8 |
61.2 |
177 |
90 |
183 |
238 |
27.0 |
| Sus barbatus |
38.1 |
61.9 |
169 |
93 |
190 |
236 |
16.2 |
| Phacochoerus africanus |
40.0 |
60.0 |
179 |
96 |
177 |
236 |
20.9 |
| Sus verrucosus |
38.0 |
62.0 |
167 |
92 |
188 |
235 |
17.0 |
| Stats for COX3 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
43.4 |
56.6 |
216 |
124 |
218 |
226 |
22.0 |
| Sus scrofa |
44.0 |
56.0 |
227 |
118 |
209 |
230 |
27.0 |
| Sus barbatus |
42.5 |
57.5 |
219 |
115 |
217 |
234 |
16.2 |
| Phacochoerus africanus |
43.9 |
56.1 |
222 |
122 |
215 |
225 |
20.9 |
| Sus verrucosus |
42.6 |
57.4 |
219 |
115 |
217 |
233 |
17.0 |
| Stats for CYTB (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
42.1 |
57.9 |
319 |
161 |
310 |
350 |
22.0 |
| Sus scrofa |
41.8 |
58.2 |
329 |
148 |
303 |
360 |
27.0 |
| Sus barbatus |
42.5 |
57.5 |
335 |
149 |
297 |
359 |
16.2 |
| Phacochoerus africanus |
41.1 |
58.9 |
328 |
141 |
302 |
369 |
20.9 |
| Sus verrucosus |
42.3 |
57.7 |
334 |
148 |
298 |
360 |
17.0 |
| Stats for ND1 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
40.2 |
59.8 |
265 |
119 |
258 |
313 |
22.0 |
| Sus scrofa |
42.3 |
57.7 |
282 |
122 |
236 |
315 |
27.0 |
| Sus barbatus |
42.5 |
57.5 |
285 |
119 |
236 |
311 |
16.2 |
| Phacochoerus africanus |
42.3 |
57.7 |
289 |
115 |
237 |
314 |
20.9 |
| Sus verrucosus |
42.3 |
57.7 |
286 |
118 |
239 |
312 |
17.0 |
| Stats for ND2 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
36.2 |
63.8 |
273 |
104 |
268 |
397 |
22.0 |
| Sus scrofa |
37.0 |
63.0 |
286 |
100 |
250 |
406 |
27.0 |
| Sus barbatus |
36.6 |
63.4 |
286 |
96 |
249 |
413 |
16.2 |
| Phacochoerus africanus |
36.1 |
63.9 |
284 |
92 |
256 |
410 |
20.9 |
| Sus verrucosus |
36.2 |
63.8 |
282 |
95 |
253 |
412 |
17.0 |
| Stats for ND3 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
40.3 |
59.7 |
93 |
47 |
93 |
114 |
22.0 |
| Sus scrofa |
39.6 |
60.4 |
100 |
37 |
89 |
120 |
27.0 |
| Sus barbatus |
39.8 |
60.2 |
100 |
38 |
89 |
120 |
16.2 |
| Phacochoerus africanus |
38.9 |
61.1 |
95 |
40 |
90 |
122 |
20.9 |
| Sus verrucosus |
39.6 |
60.4 |
100 |
37 |
89 |
120 |
17.0 |
| Stats for ND4 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
39.6 |
60.4 |
391 |
155 |
379 |
453 |
22.0 |
| Sus scrofa |
39.9 |
60.1 |
410 |
140 |
357 |
471 |
27.0 |
| Sus barbatus |
39.3 |
60.7 |
405 |
139 |
365 |
474 |
16.2 |
| Phacochoerus africanus |
39.0 |
61.0 |
394 |
143 |
376 |
465 |
20.9 |
| Sus verrucosus |
39.4 |
60.6 |
405 |
138 |
364 |
471 |
17.0 |
| Stats for ND4L (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
38.0 |
62.0 |
74 |
39 |
96 |
88 |
22.0 |
| Sus scrofa |
37.4 |
62.6 |
74 |
37 |
92 |
94 |
27.0 |
| Sus barbatus |
36.4 |
63.6 |
74 |
34 |
92 |
97 |
16.2 |
| Phacochoerus africanus |
34.7 |
65.3 |
67 |
36 |
101 |
93 |
20.9 |
| Sus verrucosus |
36.4 |
63.6 |
74 |
34 |
92 |
97 |
17.0 |
| Stats for ND5 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
37.9 |
62.1 |
480 |
211 |
509 |
621 |
22.0 |
| Sus scrofa |
38.6 |
61.4 |
512 |
190 |
476 |
643 |
27.0 |
| Sus barbatus |
38.9 |
61.1 |
509 |
192 |
476 |
627 |
16.2 |
| Phacochoerus africanus |
39.2 |
60.8 |
513 |
200 |
478 |
630 |
20.9 |
| Sus verrucosus |
38.5 |
61.5 |
510 |
191 |
483 |
637 |
17.0 |
| Stats for ND6 (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
36.9 |
63.1 |
148 |
47 |
106 |
227 |
22.0 |
| Sus scrofa |
34.3 |
65.7 |
143 |
38 |
110 |
237 |
27.0 |
| Sus barbatus |
34.7 |
65.3 |
141 |
40 |
107 |
234 |
16.2 |
| Phacochoerus africanus |
35.0 |
65.0 |
147 |
38 |
106 |
237 |
20.9 |
| Sus verrucosus |
34.7 |
65.3 |
141 |
42 |
112 |
233 |
17.0 |
| Stats for 12S rRNA gene (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
41.4 |
58.6 |
217 |
181 |
222 |
342 |
22.0 |
| Sus scrofa |
40.8 |
59.2 |
223 |
169 |
217 |
351 |
27.0 |
| Sus barbatus |
40.3 |
59.7 |
221 |
165 |
217 |
356 |
16.2 |
| Phacochoerus africanus |
40.1 |
59.9 |
219 |
167 |
224 |
353 |
20.9 |
| Sus verrucosus |
40.0 |
60.0 |
219 |
165 |
218 |
357 |
17.0 |
| Stats for 16S rRNA gene (group size: 5 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Potamochoerus porcus |
36.6 |
63.4 |
318 |
258 |
385 |
612 |
22.0 |
| Sus scrofa |
37.7 |
62.3 |
331 |
261 |
372 |
607 |
27.0 |
| Sus barbatus |
37.2 |
62.8 |
326 |
259 |
374 |
613 |
16.2 |
| Phacochoerus africanus |
36.8 |
63.2 |
317 |
261 |
387 |
607 |
20.9 |
| Sus verrucosus |
37.4 |
62.6 |
329 |
258 |
371 |
612 |
17.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email: 
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.
