Stats for family Camelidae
Species in family:
| Stats for total mtDNA (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.5 - 42.1% | 57.9 - 59.5% | 4149 - 4423 | 2370 - 2578 | 4489 - 4562 | 5076 - 5298 | 25.8 - 35.4 |
| Median | 40.9% | 59.2% | 4375 | 2430 | 4546 | 5270 | 31.6 |
| Average ± stdev | 41.2 ± 0.6% | 58.8 ± 0.6% | 4348 ± 91 | 2466 ± 79 | 4530 ± 25 | 5202 ± 85 | 30.6 ± 3.3 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.03 | 0.01 | 0.02 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.17 | -0.17 | -0.10 | 0.20 | -0.15 | -0.33 | - |
| Pearson p-value (two tailed) |
7.50E-01 | 7.50E-01 | 8.44E-01 | 7.10E-01 | 7.81E-01 | 5.26E-01 | - |
| Stats for total protein-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.5 - 42.3% | 57.7 - 59.5% | 3084 - 3181 | 1497 - 1619 | 3192 - 3282 | 3355 - 3487 | 25.8 - 35.4 |
| Median | 40.9% | 59.2% | 3144 | 1509 | 3241 | 3476 | 31.6 |
| Average ± stdev | 41.2 ± 0.8% | 58.8 ± 0.8% | 3134 ± 32 | 1539 ± 53 | 3231 ± 30 | 3436 ± 57 | 30.6 ± 3.3 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.03 | 0.01 | 0.02 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.13 | -0.13 | -0.21 | 0.31 | 0.20 | -0.32 | - |
| Pearson p-value (two tailed) |
8.04E-01 | 8.04E-01 | 6.93E-01 | 5.52E-01 | 7.00E-01 | 5.38E-01 | - |
| Stats for D-loop (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Stats for total tRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.3 - 39.6% | 60.4 - 61.7% | 317 - 331 | 257 - 266 | 404 - 413 | 499 - 513 | 25.8 - 35.4 |
| Median | 39.0% | 61.5% | 325 | 259 | 412 | 512 | 31.6 |
| Average ± stdev | 38.8 ± 0.5% | 61.2 ± 0.5% | 323 ± 5 | 259 ± 2 | 410 ± 2 | 508 ± 5 | 30.6 ± 3.3 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.08 | -0.08 | 0.25 | -0.10 | 0.15 | -0.01 | - |
| Pearson p-value (two tailed) |
8.85E-01 | 8.85E-01 | 6.35E-01 | 8.55E-01 | 7.83E-01 | 9.86E-01 | - |
| Stats for total rRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.1 - 40.5% | 59.5 - 59.9% | 538 - 549 | 472 - 478 | 607 - 615 | 898 - 903 | 25.8 - 35.4 |
| Median | 40.3% | 59.7% | 549 | 475 | 611 | 902 | 31.6 |
| Average ± stdev | 40.3 ± 0.1% | 59.7 ± 0.1% | 545 ± 4 | 474 ± 1 | 610 ± 2 | 900 ± 1 | 30.6 ± 3.3 |
| Coefficient of variation | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.72 | 0.72 | -0.18 | -0.26 | 0.60 | 0.81 | - |
| Pearson p-value (two tailed) |
1.04E-01 | 1.04E-01 | 7.36E-01 | 6.14E-01 | 2.03E-01 | 5.03E-02 | - |
| Stats for ATP6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.9 - 40.5% | 59.5 - 61.1% | 183 - 189 | 81 - 92 | 195 - 208 | 198 - 210 | 25.8 - 35.4 |
| Median | 40.4% | 60.6% | 184 | 87 | 206 | 210 | 31.6 |
| Average ± stdev | 39.8 ± 0.8% | 60.2 ± 0.8% | 184 ± 2 | 86 ± 4 | 204 ± 4 | 205 ± 5 | 30.6 ± 3.3 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.05 | 0.02 | 0.03 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.88 | -0.88 | 0.57 | 0.72 | -0.47 | -0.42 | - |
| Pearson p-value (two tailed) |
2.16E-02 | 2.16E-02 | 2.36E-01 | 1.04E-01 | 3.51E-01 | 4.06E-01 | - |
| Stats for ATP8 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 34.3 - 37.3% | 62.7 - 65.7% | 53 - 55 | 15 - 23 | 54 - 57 | 71 - 80 | 25.8 - 35.4 |
| Median | 35.3% | 65.2% | 55 | 17 | 56 | 79 | 31.6 |
| Average ± stdev | 35.3 ± 1.1% | 64.7 ± 1.1% | 54 ± 0 | 17 ± 2 | 55 ± 1 | 76 ± 3 | 30.6 ± 3.3 |
| Coefficient of variation | 0.03 | 0.02 | 0.01 | 0.15 | 0.02 | 0.04 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.04 | -0.04 | 0.62 | -0.15 | 0.37 | -0.16 | - |
| Pearson p-value (two tailed) |
9.41E-01 | 9.41E-01 | 1.89E-01 | 7.78E-01 | 4.67E-01 | 7.63E-01 | - |
| Stats for COX1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.8 - 43.9% | 56.1 - 57.2% | 385 - 400 | 269 - 293 | 451 - 472 | 396 - 426 | 25.8 - 35.4 |
| Median | 43.6% | 56.4% | 399 | 276 | 464 | 421 | 31.6 |
| Average ± stdev | 43.5 ± 0.4% | 56.5 ± 0.4% | 392 ± 7 | 279 ± 9 | 459 ± 9 | 413 ± 12 | 30.6 ± 3.3 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.03 | 0.02 | 0.03 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.06 | 0.06 | -0.37 | 0.24 | 0.32 | -0.21 | - |
| Pearson p-value (two tailed) |
9.08E-01 | 9.08E-01 | 4.71E-01 | 6.44E-01 | 5.42E-01 | 6.88E-01 | - |
| Stats for COX2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.0 - 40.5% | 59.5 - 61.0% | 158 - 166 | 105 - 111 | 192 - 202 | 210 - 216 | 25.8 - 35.4 |
| Median | 40.2% | 59.8% | 164 | 111 | 199 | 215 | 31.6 |
| Average ± stdev | 39.9 ± 0.6% | 60.1 ± 0.6% | 163 ± 2 | 110 ± 2 | 196 ± 4 | 214 ± 2 | 30.6 ± 3.3 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | 0.01 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.02 | 0.02 | -0.28 | 0.29 | 0.24 | -0.45 | - |
| Pearson p-value (two tailed) |
9.72E-01 | 9.72E-01 | 5.96E-01 | 5.76E-01 | 6.51E-01 | 3.65E-01 | - |
| Stats for COX3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 47.6% | 52.4 - 56.1% | 219 - 231 | 124 - 142 | 224 - 240 | 187 - 203 | 25.8 - 35.4 |
| Median | 45.4% | 55.0% | 229 | 125 | 229 | 200 | 31.6 |
| Average ± stdev | 45.6 ± 1.3% | 54.4 ± 1.3% | 227 ± 4 | 130 ± 8 | 229 ± 4 | 196 ± 6 | 30.6 ± 3.3 |
| Coefficient of variation | 0.03 | 0.02 | 0.02 | 0.06 | 0.02 | 0.03 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.02 | 0.02 | -0.53 | 0.25 | 0.34 | -0.23 | - |
| Pearson p-value (two tailed) |
9.70E-01 | 9.70E-01 | 2.81E-01 | 6.36E-01 | 5.11E-01 | 6.63E-01 | - |
| Stats for CYTB (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.8 - 43.2% | 56.8 - 58.2% | 314 - 331 | 159 - 171 | 307 - 328 | 331 - 341 | 25.8 - 35.4 |
| Median | 42.4% | 57.9% | 317 | 163 | 325 | 337 | 31.6 |
| Average ± stdev | 42.4 ± 0.6% | 57.6 ± 0.6% | 318 ± 5 | 164 ± 4 | 321 ± 7 | 335 ± 3 | 30.6 ± 3.3 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.03 | 0.02 | 0.01 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.20 | 0.20 | -0.56 | 0.44 | 0.58 | -0.85 | - |
| Pearson p-value (two tailed) |
7.10E-01 | 7.10E-01 | 2.53E-01 | 3.86E-01 | 2.26E-01 | 3.13E-02 | - |
| Stats for ND1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.8 - 46.2% | 53.8 - 59.2% | 269 - 309 | 121 - 135 | 245 - 287 | 265 - 279 | 25.8 - 35.4 |
| Median | 41.7% | 58.4% | 278 | 125 | 283 | 279 | 31.6 |
| Average ± stdev | 42.8 ± 2.3% | 57.2 ± 2.3% | 283 ± 15 | 126 ± 5 | 272 ± 15 | 274 ± 5 | 30.6 ± 3.3 |
| Coefficient of variation | 0.05 | 0.04 | 0.05 | 0.04 | 0.06 | 0.02 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.12 | -0.12 | 0.02 | 0.33 | -0.05 | -0.44 | - |
| Pearson p-value (two tailed) |
8.14E-01 | 8.14E-01 | 9.76E-01 | 5.21E-01 | 9.24E-01 | 3.85E-01 | - |
| Stats for ND2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.1 - 37.7% | 62.3 - 63.9% | 275 - 286 | 101 - 108 | 287 - 296 | 362 - 371 | 25.8 - 35.4 |
| Median | 37.2% | 62.9% | 280 | 107 | 292 | 364 | 31.6 |
| Average ± stdev | 37.0 ± 0.6% | 63.0 ± 0.6% | 280 ± 4 | 105 ± 2 | 292 ± 2 | 364 ± 3 | 30.6 ± 3.3 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.01 | 0.01 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.01 | 0.01 | -0.04 | -0.06 | -0.09 | -0.04 | - |
| Pearson p-value (two tailed) |
9.83E-01 | 9.83E-01 | 9.43E-01 | 9.12E-01 | 8.67E-01 | 9.47E-01 | - |
| Stats for ND3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.0 - 44.0% | 56.0 - 62.0% | 92 - 103 | 40 - 51 | 105 - 113 | 91 - 104 | 25.8 - 35.4 |
| Median | 40.3% | 60.9% | 98 | 41 | 110 | 102 | 31.6 |
| Average ± stdev | 40.4 ± 2.2% | 59.6 ± 2.2% | 97 ± 3 | 43 ± 4 | 108 ± 2 | 98 ± 5 | 30.6 ± 3.3 |
| Coefficient of variation | 0.06 | 0.04 | 0.03 | 0.10 | 0.02 | 0.05 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.17 | -0.17 | -0.02 | 0.22 | 0.06 | -0.33 | - |
| Pearson p-value (two tailed) |
7.54E-01 | 7.54E-01 | 9.77E-01 | 6.81E-01 | 9.06E-01 | 5.29E-01 | - |
| Stats for ND4 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.4 - 43.4% | 56.6 - 59.6% | 392 - 402 | 165 - 196 | 377 - 389 | 403 - 432 | 25.8 - 35.4 |
| Median | 41.4% | 58.6% | 398 | 172 | 384 | 425 | 31.6 |
| Average ± stdev | 41.6 ± 1.1% | 58.4 ± 1.1% | 396 ± 3 | 176 ± 11 | 383 ± 3 | 420 ± 10 | 30.6 ± 3.3 |
| Coefficient of variation | 0.03 | 0.02 | 0.01 | 0.07 | 0.01 | 0.03 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.14 | 0.14 | -0.66 | 0.04 | 0.44 | 0.03 | - |
| Pearson p-value (two tailed) |
7.85E-01 | 7.85E-01 | 1.52E-01 | 9.36E-01 | 3.79E-01 | 9.57E-01 | - |
| Stats for ND4L (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.7 - 42.8% | 57.2 - 62.3% | 74 - 84 | 38 - 43 | 90 - 99 | 79 - 88 | 25.8 - 35.4 |
| Median | 38.4% | 61.6% | 75 | 39 | 96 | 87 | 31.6 |
| Average ± stdev | 39.2 ± 1.9% | 60.8 ± 1.9% | 76 ± 3 | 40 ± 2 | 95 ± 2 | 84 ± 3 | 30.6 ± 3.3 |
| Coefficient of variation | 0.05 | 0.03 | 0.04 | 0.05 | 0.03 | 0.04 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.12 | 0.12 | -0.26 | 0.13 | 0.55 | -0.23 | - |
| Pearson p-value (two tailed) |
8.23E-01 | 8.23E-01 | 6.13E-01 | 8.03E-01 | 2.60E-01 | 6.55E-01 | - |
| Stats for ND5 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.9 - 41.7% | 58.3 - 60.1% | 513 - 529 | 212 - 231 | 508 - 520 | 553 - 576 | 25.8 - 35.4 |
| Median | 40.9% | 59.7% | 522 | 223 | 515 | 571 | 31.6 |
| Average ± stdev | 40.7 ± 0.7% | 59.3 ± 0.7% | 521 ± 5 | 220 ± 6 | 514 ± 3 | 565 ± 9 | 30.6 ± 3.3 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.03 | 0.01 | 0.02 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.39 | -0.39 | 0.20 | 0.57 | -0.28 | -0.37 | - |
| Pearson p-value (two tailed) |
4.46E-01 | 4.46E-01 | 7.07E-01 | 2.41E-01 | 5.97E-01 | 4.65E-01 | - |
| Stats for ND6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.8 - 39.8% | 60.2 - 64.2% | 145 - 160 | 42 - 54 | 108 - 127 | 207 - 213 | 25.8 - 35.4 |
| Median | 36.6% | 63.4% | 150 | 45 | 123 | 212 | 31.6 |
| Average ± stdev | 37.4 ± 1.8% | 62.6 ± 1.8% | 151 ± 5 | 46 ± 4 | 119 ± 7 | 210 ± 1 | 30.6 ± 3.3 |
| Coefficient of variation | 0.05 | 0.03 | 0.03 | 0.09 | 0.06 | 0.01 | 0.11 |
| Pearson correlation coefficient with log10MLS |
0.34 | -0.34 | 0.58 | -0.03 | -0.47 | 0.27 | - |
| Pearson p-value (two tailed) |
5.14E-01 | 5.14E-01 | 2.23E-01 | 9.58E-01 | 3.50E-01 | 6.03E-01 | - |
| Stats for 12S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.5 - 43.3% | 56.7 - 57.5% | 225 - 231 | 185 - 193 | 212 - 218 | 332 - 339 | 25.8 - 35.4 |
| Median | 43.2% | 57.1% | 229 | 187 | 216 | 338 | 31.6 |
| Average ± stdev | 43.0 ± 0.3% | 57.0 ± 0.3% | 228 ± 2 | 187 ± 2 | 215 ± 2 | 336 ± 2 | 30.6 ± 3.3 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.60 | 0.60 | -0.45 | -0.17 | 0.56 | 0.10 | - |
| Pearson p-value (two tailed) |
2.09E-01 | 2.09E-01 | 3.65E-01 | 7.41E-01 | 2.43E-01 | 8.52E-01 | - |
| Stats for 16S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.4 - 39.0% | 61.0 - 61.6% | 313 - 323 | 285 - 289 | 392 - 399 | 561 - 567 | 25.8 - 35.4 |
| Median | 38.7% | 61.4% | 318 | 287 | 396 | 564 | 31.6 |
| Average ± stdev | 38.6 ± 0.2% | 61.4 ± 0.2% | 317 ± 2 | 286 ± 1 | 395 ± 2 | 564 ± 1 | 30.6 ± 3.3 |
| Coefficient of variation | 0.01 | 0.00 | 0.01 | 0.01 | 0.01 | 0.00 | 0.11 |
| Pearson correlation coefficient with log10MLS |
-0.11 | 0.11 | 0.12 | -0.01 | 0.06 | 0.68 | - |
| Pearson p-value (two tailed) |
8.37E-01 | 8.37E-01 | 8.19E-01 | 9.82E-01 | 9.11E-01 | 1.34E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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