Stats for family Callitrichidae
Species in family:
| Stats for total mtDNA (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.5 - 40.6% | 59.4 - 62.5% | 4107 - 4459 | 2124 - 2255 | 4427 - 5046 | 5345 - 5499 | 17.6 - 31.6 |
| Median | 40.3% | 60.3% | 4440 | 2220 | 4502 | 5463 | 22.8 |
| Average ± stdev | 39.4 ± 1.3% | 60.6 ± 1.3% | 4333 ± 143 | 2201 ± 41 | 4608 ± 220 | 5434 ± 56 | 23.2 ± 4.7 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.02 | 0.05 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.52 | 0.52 | -0.54 | 0.29 | 0.73 | 0.16 | - |
| Pearson p-value (two tailed) |
2.86E-01 | 2.86E-01 | 2.70E-01 | 5.71E-01 | 9.85E-02 | 7.62E-01 | - |
| Stats for total protein-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.1 - 40.9% | 59.1 - 62.9% | 2902 - 3247 | 1296 - 1404 | 3105 - 3496 | 3550 - 3676 | 17.6 - 31.6 |
| Median | 40.6% | 60.1% | 3240 | 1362 | 3157 | 3631 | 22.8 |
| Average ± stdev | 39.5 ± 1.7% | 60.5 ± 1.7% | 3136 ± 139 | 1346 ± 38 | 3236 ± 153 | 3625 ± 42 | 23.2 ± 4.7 |
| Coefficient of variation | 0.04 | 0.03 | 0.04 | 0.03 | 0.05 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.53 | 0.53 | -0.61 | -0.17 | 0.67 | -0.28 | - |
| Pearson p-value (two tailed) |
2.84E-01 | 2.84E-01 | 2.02E-01 | 7.52E-01 | 1.44E-01 | 5.86E-01 | - |
| Stats for D-loop (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Stats for total tRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 34.8 - 36.1% | 63.9 - 65.2% | 290 - 316 | 224 - 233 | 425 - 447 | 529 - 538 | 17.6 - 31.6 |
| Median | 35.9% | 64.2% | 309 | 232 | 433 | 532 | 22.8 |
| Average ± stdev | 35.7 ± 0.5% | 64.3 ± 0.5% | 305 ± 8 | 230 ± 3 | 433 ± 6 | 533 ± 3 | 23.2 ± 4.7 |
| Coefficient of variation | 0.01 | 0.01 | 0.03 | 0.01 | 0.02 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.80 | 0.80 | -0.75 | 0.28 | 0.60 | 0.33 | - |
| Pearson p-value (two tailed) |
5.34E-02 | 5.34E-02 | 8.90E-02 | 5.88E-01 | 2.12E-01 | 5.23E-01 | - |
| Stats for total rRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.3 - 41.6% | 58.4 - 60.7% | 545 - 596 | 437 - 446 | 593 - 642 | 869 - 900 | 17.6 - 31.6 |
| Median | 40.9% | 59.7% | 584 | 442 | 603 | 880 | 22.8 |
| Average ± stdev | 40.5 ± 0.8% | 59.5 ± 0.8% | 573 ± 17 | 441 ± 2 | 608 ± 16 | 880 ± 9 | 23.2 ± 4.7 |
| Coefficient of variation | 0.02 | 0.01 | 0.03 | 0.01 | 0.03 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.40 | 0.40 | -0.36 | -0.49 | 0.58 | -0.32 | - |
| Pearson p-value (two tailed) |
4.37E-01 | 4.37E-01 | 4.80E-01 | 3.27E-01 | 2.24E-01 | 5.35E-01 | - |
| Stats for ATP6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.1 - 40.7% | 59.3 - 64.9% | 174 - 205 | 65 - 72 | 190 - 220 | 210 - 222 | 17.6 - 31.6 |
| Median | 39.6% | 60.9% | 201 | 68 | 196 | 219 | 22.8 |
| Average ± stdev | 38.5 ± 2.1% | 61.5 ± 2.1% | 194 ± 11 | 67 ± 2 | 201 ± 11 | 217 ± 3 | 23.2 ± 4.7 |
| Coefficient of variation | 0.06 | 0.03 | 0.06 | 0.03 | 0.05 | 0.02 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.51 | 0.51 | -0.55 | -0.10 | 0.57 | 0.12 | - |
| Pearson p-value (two tailed) |
3.03E-01 | 3.03E-01 | 2.60E-01 | 8.45E-01 | 2.42E-01 | 8.16E-01 | - |
| Stats for ATP8 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 26.1 - 33.3% | 66.7 - 73.9% | 40 - 54 | 14 - 16 | 56 - 66 | 81 - 87 | 17.6 - 31.6 |
| Median | 32.4% | 68.7% | 51 | 15 | 58 | 81 | 22.8 |
| Average ± stdev | 31.2 ± 2.6% | 68.8 ± 2.6% | 49 ± 4 | 14 ± 0 | 58 ± 3 | 82 ± 2 | 23.2 ± 4.7 |
| Coefficient of variation | 0.08 | 0.04 | 0.09 | 0.05 | 0.06 | 0.03 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.75 | 0.75 | -0.70 | -0.61 | 0.64 | 0.82 | - |
| Pearson p-value (two tailed) |
8.80E-02 | 8.80E-02 | 1.22E-01 | 2.00E-01 | 1.72E-01 | 4.74E-02 | - |
| Stats for COX1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.2 - 42.5% | 57.5 - 60.8% | 364 - 406 | 246 - 257 | 455 - 502 | 429 - 445 | 17.6 - 31.6 |
| Median | 42.5% | 58.2% | 398 | 255 | 461 | 438 | 22.8 |
| Average ± stdev | 41.3 ± 1.5% | 58.7 ± 1.5% | 388 ± 17 | 252 ± 4 | 471 ± 20 | 436 ± 5 | 23.2 ± 4.7 |
| Coefficient of variation | 0.04 | 0.03 | 0.05 | 0.02 | 0.04 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.52 | 0.52 | -0.50 | -0.56 | 0.55 | -0.07 | - |
| Pearson p-value (two tailed) |
2.94E-01 | 2.94E-01 | 3.09E-01 | 2.50E-01 | 2.58E-01 | 8.93E-01 | - |
| Stats for COX2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.9 - 40.8% | 59.2 - 63.1% | 165 - 194 | 87 - 99 | 185 - 213 | 216 - 222 | 17.6 - 31.6 |
| Median | 40.7% | 59.6% | 184 | 96 | 193 | 221 | 22.8 |
| Average ± stdev | 39.6 ± 1.8% | 60.4 ± 1.8% | 178 ± 10 | 93 ± 4 | 196 ± 11 | 219 ± 2 | 23.2 ± 4.7 |
| Coefficient of variation | 0.05 | 0.03 | 0.06 | 0.05 | 0.06 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.59 | 0.59 | -0.27 | -0.86 | 0.45 | 0.48 | - |
| Pearson p-value (two tailed) |
2.20E-01 | 2.20E-01 | 6.04E-01 | 2.76E-02 | 3.66E-01 | 3.30E-01 | - |
| Stats for COX3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.8 - 45.9% | 54.1 - 58.2% | 211 - 240 | 110 - 120 | 210 - 231 | 212 - 226 | 17.6 - 31.6 |
| Median | 43.1% | 57.3% | 221 | 117 | 223 | 225 | 22.8 |
| Average ± stdev | 43.4 ± 1.6% | 56.6 ± 1.6% | 224 ± 9 | 116 ± 3 | 220 ± 7 | 222 ± 4 | 23.2 ± 4.7 |
| Coefficient of variation | 0.04 | 0.03 | 0.04 | 0.03 | 0.03 | 0.02 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.14 | 0.14 | -0.02 | -0.47 | 0.33 | -0.19 | - |
| Pearson p-value (two tailed) |
7.95E-01 | 7.95E-01 | 9.76E-01 | 3.42E-01 | 5.24E-01 | 7.16E-01 | - |
| Stats for CYTB (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.9 - 45.0% | 55.0 - 60.1% | 320 - 357 | 135 - 158 | 302 - 343 | 324 - 346 | 17.6 - 31.6 |
| Median | 44.4% | 57.4% | 355 | 149 | 308 | 336 | 22.8 |
| Average ± stdev | 42.9 ± 2.2% | 57.1 ± 2.2% | 343 ± 15 | 146 ± 9 | 317 ± 17 | 333 ± 8 | 23.2 ± 4.7 |
| Coefficient of variation | 0.05 | 0.04 | 0.05 | 0.07 | 0.06 | 0.03 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.39 | 0.39 | -0.47 | -0.18 | 0.54 | -0.05 | - |
| Pearson p-value (two tailed) |
4.45E-01 | 4.45E-01 | 3.47E-01 | 7.39E-01 | 2.69E-01 | 9.22E-01 | - |
| Stats for ND1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.0 - 42.3% | 57.7 - 61.0% | 270 - 299 | 99 - 111 | 250 - 285 | 296 - 309 | 17.6 - 31.6 |
| Median | 41.2% | 59.7% | 283 | 106 | 267 | 302 | 22.8 |
| Average ± stdev | 40.6 ± 1.4% | 59.4 ± 1.4% | 282 ± 10 | 105 ± 3 | 266 ± 11 | 301 ± 4 | 23.2 ± 4.7 |
| Coefficient of variation | 0.03 | 0.02 | 0.04 | 0.03 | 0.04 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.50 | 0.50 | -0.58 | -0.01 | 0.74 | -0.55 | - |
| Pearson p-value (two tailed) |
3.10E-01 | 3.10E-01 | 2.23E-01 | 9.79E-01 | 9.06E-02 | 2.57E-01 | - |
| Stats for ND2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 34.0 - 39.2% | 60.8 - 66.0% | 270 - 323 | 73 - 86 | 251 - 320 | 366 - 389 | 17.6 - 31.6 |
| Median | 37.8% | 62.5% | 308 | 83 | 282 | 382 | 22.8 |
| Average ± stdev | 36.8 ± 2.3% | 63.2 ± 2.3% | 301 ± 19 | 81 ± 4 | 278 ± 24 | 377 ± 8 | 23.2 ± 4.7 |
| Coefficient of variation | 0.06 | 0.04 | 0.06 | 0.05 | 0.09 | 0.02 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.64 | 0.64 | -0.67 | -0.21 | 0.82 | -0.73 | - |
| Pearson p-value (two tailed) |
1.75E-01 | 1.75E-01 | 1.43E-01 | 6.87E-01 | 4.69E-02 | 1.01E-01 | - |
| Stats for ND3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.5 - 41.9% | 58.1 - 64.5% | 85 - 102 | 35 - 44 | 95 - 114 | 106 - 114 | 17.6 - 31.6 |
| Median | 40.5% | 59.8% | 102 | 38 | 98 | 109 | 22.8 |
| Average ± stdev | 39.1 ± 2.6% | 60.9 ± 2.6% | 97 ± 6 | 38 ± 2 | 101 ± 6 | 109 ± 2 | 23.2 ± 4.7 |
| Coefficient of variation | 0.07 | 0.04 | 0.07 | 0.07 | 0.07 | 0.02 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.44 | 0.44 | -0.67 | 0.36 | 0.59 | -0.12 | - |
| Pearson p-value (two tailed) |
3.84E-01 | 3.84E-01 | 1.44E-01 | 4.81E-01 | 2.18E-01 | 8.22E-01 | - |
| Stats for ND4 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.0 - 40.8% | 59.2 - 65.0% | 344 - 397 | 131 - 168 | 385 - 439 | 429 - 459 | 17.6 - 31.6 |
| Median | 38.9% | 62.5% | 388 | 146 | 401 | 455 | 22.8 |
| Average ± stdev | 38.1 ± 2.1% | 61.9 ± 2.1% | 377 ± 19 | 145 ± 11 | 402 ± 19 | 449 ± 10 | 23.2 ± 4.7 |
| Coefficient of variation | 0.05 | 0.03 | 0.05 | 0.08 | 0.05 | 0.02 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.30 | 0.30 | -0.54 | 0.21 | 0.55 | -0.26 | - |
| Pearson p-value (two tailed) |
5.58E-01 | 5.58E-01 | 2.65E-01 | 6.84E-01 | 2.54E-01 | 6.23E-01 | - |
| Stats for ND4L (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 30.6 - 36.0% | 64.0 - 69.4% | 56 - 75 | 31 - 39 | 96 - 115 | 87 - 95 | 17.6 - 31.6 |
| Median | 35.7% | 65.3% | 71 | 33 | 104 | 94 | 22.8 |
| Average ± stdev | 34.2 ± 2.3% | 65.8 ± 2.3% | 67 ± 6 | 33 ± 2 | 103 ± 7 | 92 ± 2 | 23.2 ± 4.7 |
| Coefficient of variation | 0.07 | 0.04 | 0.10 | 0.08 | 0.07 | 0.03 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.59 | 0.59 | -0.79 | 0.55 | 0.78 | -0.68 | - |
| Pearson p-value (two tailed) |
2.22E-01 | 2.22E-01 | 6.12E-02 | 2.57E-01 | 6.49E-02 | 1.37E-01 | - |
| Stats for ND5 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.3 - 39.6% | 60.4 - 63.7% | 461 - 513 | 187 - 212 | 498 - 554 | 576 - 602 | 17.6 - 31.6 |
| Median | 39.3% | 60.9% | 507 | 203 | 517 | 590 | 22.8 |
| Average ± stdev | 38.6 ± 1.3% | 61.4 ± 1.3% | 497 ± 17 | 199 ± 8 | 519 ± 20 | 589 ± 8 | 23.2 ± 4.7 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.04 | 0.04 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.68 | 0.68 | -0.84 | -0.00 | 0.78 | -0.16 | - |
| Pearson p-value (two tailed) |
1.41E-01 | 1.41E-01 | 3.74E-02 | 9.98E-01 | 6.65E-02 | 7.61E-01 | - |
| Stats for ND6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.3 - 40.1% | 59.9 - 63.7% | 140 - 154 | 53 - 60 | 112 - 124 | 207 - 221 | 17.6 - 31.6 |
| Median | 38.6% | 61.6% | 149 | 57 | 114 | 215 | 22.8 |
| Average ± stdev | 38.2 ± 1.5% | 61.8 ± 1.5% | 147 ± 5 | 56 ± 2 | 115 ± 4 | 214 ± 4 | 23.2 ± 4.7 |
| Coefficient of variation | 0.04 | 0.02 | 0.04 | 0.04 | 0.04 | 0.02 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.62 | 0.62 | -0.63 | -0.56 | 0.62 | 0.44 | - |
| Pearson p-value (two tailed) |
1.87E-01 | 1.87E-01 | 1.79E-01 | 2.48E-01 | 1.91E-01 | 3.84E-01 | - |
| Stats for 12S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.8 - 44.1% | 55.9 - 58.2% | 221 - 237 | 174 - 183 | 210 - 226 | 319 - 333 | 17.6 - 31.6 |
| Median | 43.5% | 57.3% | 233 | 180 | 217 | 321 | 22.8 |
| Average ± stdev | 43.0 ± 0.9% | 57.0 ± 0.9% | 228 ± 6 | 179 ± 2 | 217 ± 5 | 323 ± 4 | 23.2 ± 4.7 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.02 | 0.02 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.35 | 0.35 | -0.16 | -0.70 | 0.28 | 0.11 | - |
| Pearson p-value (two tailed) |
4.95E-01 | 4.95E-01 | 7.64E-01 | 1.24E-01 | 5.96E-01 | 8.32E-01 | - |
| Stats for 16S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.7 - 40.0% | 60.0 - 62.3% | 324 - 359 | 260 - 264 | 380 - 416 | 550 - 567 | 17.6 - 31.6 |
| Median | 39.3% | 61.1% | 351 | 263 | 388 | 560 | 22.8 |
| Average ± stdev | 39.0 ± 0.8% | 61.0 ± 0.8% | 345 ± 11 | 262 ± 1 | 390 ± 11 | 557 ± 5 | 23.2 ± 4.7 |
| Coefficient of variation | 0.02 | 0.01 | 0.03 | 0.01 | 0.03 | 0.01 | 0.20 |
| Pearson correlation coefficient with log10MLS |
-0.42 | 0.42 | -0.47 | 0.42 | 0.69 | -0.64 | - |
| Pearson p-value (two tailed) |
4.08E-01 | 4.08E-01 | 3.49E-01 | 4.01E-01 | 1.26E-01 | 1.74E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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