Stats for order Lamniformes

Browsing families:
Alopiidae (2)
Cetorhinidae (1)
Lamnidae (3)
Odontaspididae (1)
Species in group (7):
Alopias pelagicus
Alopias superciliosus
Carcharias taurus
Carcharodon carcharias
Cetorhinus maximus
Isurus oxyrinchus
Lamna ditropis
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Stats for total mtDNA (group size: 7 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.6 - 43.2% 56.8 - 61.4% 4230 - 4681 2212 - 2539 4668 - 4890 4813 - 5354 12.0 - 50.0
Median 40.6% 59.4% 4415 2326 4801 5158 25.0
Average ± stdev 40.6 ± 1.6% 59.4 ± 1.6% 4437 ± 136 2340 ± 115 4789 ± 66 5146 ± 191 27.0 ± 11.2
Coefficient of variation 0.04 0.03 0.03 0.05 0.01 0.04 0.41
Pearson correlation
coefficient with log10MLS		 0.13 -0.13 0.07 0.17 -0.08 -0.18 -
Pearson p-value
(two tailed)		 7.73E-01 7.73E-01 8.88E-01 7.16E-01 8.64E-01 6.94E-01 -
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Stats for total protein-coding genes (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.1 - 43.0% 57.0 - 60.9% 3102 - 3353 1342 - 1553 3305 - 3409 3191 - 3533 12.0 - 50.0
Median 41.5% 59.8% 3262 1438 3348 3472 29.0
Average ± stdev 40.9 ± 1.4% 59.1 ± 1.4% 3239 ± 87 1426 ± 72 3345 ± 37 3391 ± 115 27.3 ± 12.0
Coefficient of variation 0.03 0.02 0.03 0.05 0.01 0.03 0.44
Pearson correlation
coefficient with log10MLS		 0.19 -0.19 0.13 0.25 -0.08 -0.22 -
Pearson p-value
(two tailed)		 7.12E-01 7.12E-01 8.10E-01 6.28E-01 8.77E-01 6.78E-01 -
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Stats for D-loop (group size: 7 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 33.9 - 38.3% 61.7 - 66.1% 222 - 246 138 - 166 333 - 362 312 - 363 12.0 - 50.0
Median 35.7% 64.3% 232 147 344 344 25.0
Average ± stdev 36.0 ± 1.6% 64.0 ± 1.6% 234 ± 8 150 ± 9 345 ± 9 337 ± 17 27.0 ± 11.2
Coefficient of variation 0.04 0.02 0.04 0.06 0.03 0.05 0.41
Pearson correlation
coefficient with log10MLS		 -0.13 0.13 0.46 -0.17 0.40 0.35 -
Pearson p-value
(two tailed)		 7.80E-01 7.80E-01 3.02E-01 7.13E-01 3.80E-01 4.45E-01 -
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Stats for total tRNA-coding genes (group size: 7 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.5 - 39.9% 60.1 - 61.5% 338 - 352 250 - 275 417 - 433 502 - 529 12.0 - 50.0
Median 39.3% 60.7% 346 262 426 518 25.0
Average ± stdev 39.2 ± 0.5% 60.8 ± 0.5% 344 ± 4 263 ± 7 426 ± 5 514 ± 8 27.0 ± 11.2
Coefficient of variation 0.01 0.01 0.01 0.03 0.01 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.66 -0.66 0.13 0.61 -0.06 -0.54 -
Pearson p-value
(two tailed)		 1.03E-01 1.03E-01 7.86E-01 1.48E-01 9.05E-01 2.09E-01 -
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Stats for total rRNA-coding genes (group size: 7 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 40.4% 59.6 - 61.6% 556 - 583 451 - 478 659 - 679 909 - 938 12.0 - 50.0
Median 38.9% 61.1% 568 464 666 930 25.0
Average ± stdev 39.2 ± 0.7% 60.8 ± 0.7% 568 ± 11 461 ± 9 668 ± 6 925 ± 10 27.0 ± 11.2
Coefficient of variation 0.02 0.01 0.02 0.02 0.01 0.01 0.41
Pearson correlation
coefficient with log10MLS		 0.16 -0.16 -0.02 0.32 0.13 -0.35 -
Pearson p-value
(two tailed)		 7.36E-01 7.36E-01 9.60E-01 4.87E-01 7.82E-01 4.44E-01 -
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Stats for ATP6 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 36.5 - 43.0% 57.0 - 63.5% 183 - 206 67 - 88 202 - 220 188 - 214 12.0 - 50.0
Median 38.7% 61.3% 194 75 211 211 29.0
Average ± stdev 39.2 ± 2.2% 60.8 ± 2.2% 193 ± 8 74 ± 6 210 ± 5 205 ± 8 27.3 ± 12.0
Coefficient of variation 0.06 0.04 0.04 0.09 0.03 0.04 0.44
Pearson correlation
coefficient with log10MLS		 0.30 -0.30 0.48 0.01 -0.42 -0.19 -
Pearson p-value
(two tailed)		 5.58E-01 5.58E-01 3.32E-01 9.92E-01 4.10E-01 7.25E-01 -
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Stats for ATP8 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 31.0 - 35.1% 64.9 - 69.0% 41 - 44 11 - 15 44 - 51 62 - 66 12.0 - 50.0
Median 32.7% 67.3% 42 14 50 65 29.0
Average ± stdev 32.8 ± 1.5% 67.2 ± 1.5% 42 ± 1 13 ± 1 48 ± 2 64 ± 1 27.3 ± 12.0
Coefficient of variation 0.05 0.02 0.03 0.12 0.05 0.02 0.44
Pearson correlation
coefficient with log10MLS		 0.51 -0.51 0.29 0.54 -0.39 -0.18 -
Pearson p-value
(two tailed)		 3.01E-01 3.01E-01 5.73E-01 2.65E-01 4.47E-01 7.26E-01 -
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Stats for COX1 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.2 - 43.8% 56.2 - 61.8% 350 - 409 244 - 271 475 - 510 399 - 450 12.0 - 50.0
Median 42.2% 59.2% 395 261 491 429 29.0
Average ± stdev 41.3 ± 2.1% 58.7 ± 2.1% 383 ± 20 258 ± 9 488 ± 13 423 ± 17 27.3 ± 12.0
Coefficient of variation 0.05 0.04 0.05 0.04 0.03 0.04 0.44
Pearson correlation
coefficient with log10MLS		 0.34 -0.34 0.31 0.39 -0.40 -0.27 -
Pearson p-value
(two tailed)		 5.13E-01 5.13E-01 5.49E-01 4.50E-01 4.27E-01 6.10E-01 -
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Stats for COX2 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.5 - 43.0% 57.0 - 62.5% 161 - 178 95 - 119 194 - 209 200 - 225 12.0 - 50.0
Median 40.4% 61.6% 167 106 204 222 29.0
Average ± stdev 39.5 ± 2.2% 60.5 ± 2.2% 168 ± 5 105 ± 8 202 ± 4 215 ± 9 27.3 ± 12.0
Coefficient of variation 0.05 0.04 0.03 0.08 0.02 0.04 0.44
Pearson correlation
coefficient with log10MLS		 0.28 -0.28 0.21 0.30 -0.25 -0.29 -
Pearson p-value
(two tailed)		 5.93E-01 5.93E-01 6.85E-01 5.63E-01 6.36E-01 5.77E-01 -
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Stats for COX3 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.8 - 44.4% 55.6 - 59.2% 203 - 220 118 - 129 227 - 238 210 - 227 12.0 - 50.0
Median 43.1% 58.3% 214 124 233 225 29.0
Average ± stdev 42.4 ± 1.3% 57.6 ± 1.3% 210 ± 6 122 ± 3 231 ± 3 220 ± 6 27.3 ± 12.0
Coefficient of variation 0.03 0.02 0.03 0.03 0.02 0.03 0.44
Pearson correlation
coefficient with log10MLS		 0.41 -0.41 0.42 0.40 -0.66 -0.22 -
Pearson p-value
(two tailed)		 4.18E-01 4.18E-01 4.12E-01 4.32E-01 1.51E-01 6.73E-01 -
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Stats for CYTB (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.2 - 44.2% 55.8 - 58.8% 333 - 363 137 - 150 330 - 348 297 - 331 12.0 - 50.0
Median 43.5% 58.2% 352 143 343 319 29.0
Average ± stdev 42.8 ± 1.3% 57.2 ± 1.3% 347 ± 10 142 ± 4 341 ± 5 314 ± 11 27.3 ± 12.0
Coefficient of variation 0.03 0.02 0.03 0.03 0.02 0.04 0.44
Pearson correlation
coefficient with log10MLS		 0.37 -0.37 0.33 0.40 -0.42 -0.22 -
Pearson p-value
(two tailed)		 4.72E-01 4.72E-01 5.23E-01 4.28E-01 4.08E-01 6.72E-01 -
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Stats for ND1 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.2 - 43.1% 56.9 - 60.8% 271 - 303 110 - 129 274 - 297 265 - 297 12.0 - 50.0
Median 42.2% 58.1% 286 120 296 281 29.0
Average ± stdev 41.4 ± 1.7% 58.6 ± 1.7% 283 ± 10 119 ± 7 290 ± 7 281 ± 11 27.3 ± 12.0
Coefficient of variation 0.04 0.03 0.04 0.06 0.03 0.04 0.44
Pearson correlation
coefficient with log10MLS		 -0.20 0.20 -0.39 0.18 0.55 -0.12 -
Pearson p-value
(two tailed)		 7.01E-01 7.01E-01 4.45E-01 7.39E-01 2.62E-01 8.20E-01 -
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Stats for ND2 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 44.9% 55.1 - 61.6% 300 - 349 95 - 119 286 - 312 289 - 331 12.0 - 50.0
Median 41.8% 58.7% 331 105 305 322 29.0
Average ± stdev 41.3 ± 2.2% 58.7 ± 2.2% 326 ± 14 104 ± 7 297 ± 10 314 ± 14 27.3 ± 12.0
Coefficient of variation 0.05 0.04 0.04 0.07 0.03 0.05 0.44
Pearson correlation
coefficient with log10MLS		 0.05 -0.05 -0.02 0.19 0.16 -0.17 -
Pearson p-value
(two tailed)		 9.31E-01 9.31E-01 9.70E-01 7.24E-01 7.69E-01 7.50E-01 -
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Stats for ND3 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.4 - 45.3% 54.7 - 59.6% 92 - 104 48 - 58 110 - 119 74 - 91 12.0 - 50.0
Median 43.0% 57.3% 100 49 116 89 29.0
Average ± stdev 42.7 ± 1.9% 57.3 ± 1.9% 98 ± 4 50 ± 3 114 ± 3 85 ± 5 27.3 ± 12.0
Coefficient of variation 0.04 0.03 0.04 0.07 0.03 0.07 0.44
Pearson correlation
coefficient with log10MLS		 -0.29 0.29 -0.18 -0.21 0.19 0.25 -
Pearson p-value
(two tailed)		 5.78E-01 5.78E-01 7.36E-01 6.96E-01 7.14E-01 6.26E-01 -
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Stats for ND4 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.6 - 42.3% 57.7 - 61.4% 376 - 409 150 - 175 401 - 420 394 - 437 12.0 - 50.0
Median 41.1% 61.0% 398 164 408 423 29.0
Average ± stdev 40.2 ± 1.6% 59.8 ± 1.6% 392 ± 12 162 ± 8 407 ± 6 418 ± 15 27.3 ± 12.0
Coefficient of variation 0.04 0.03 0.03 0.06 0.02 0.04 0.44
Pearson correlation
coefficient with log10MLS		 0.40 -0.40 0.41 0.33 -0.39 -0.35 -
Pearson p-value
(two tailed)		 4.28E-01 4.28E-01 4.24E-01 5.27E-01 4.43E-01 4.94E-01 -
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Stats for ND4L (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.4 - 43.8% 56.2 - 61.6% 81 - 96 29 - 36 90 - 105 75 - 84 12.0 - 50.0
Median 40.7% 59.6% 89 34 100 78 29.0
Average ± stdev 40.8 ± 1.7% 59.2 ± 1.7% 87 ± 4 33 ± 2 97 ± 5 78 ± 2 27.3 ± 12.0
Coefficient of variation 0.04 0.03 0.06 0.07 0.05 0.04 0.44
Pearson correlation
coefficient with log10MLS		 -0.46 0.46 -0.65 0.44 0.71 -0.53 -
Pearson p-value
(two tailed)		 3.57E-01 3.57E-01 1.63E-01 3.81E-01 1.11E-01 2.79E-01 -
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Stats for ND5 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.8 - 41.9% 58.1 - 61.2% 522 - 566 185 - 215 510 - 538 537 - 585 12.0 - 50.0
Median 41.0% 59.8% 552 194 529 569 29.0
Average ± stdev 40.3 ± 1.2% 59.7 ± 1.2% 543 ± 15 194 ± 10 526 ± 8 564 ± 16 27.3 ± 12.0
Coefficient of variation 0.03 0.02 0.03 0.05 0.02 0.03 0.44
Pearson correlation
coefficient with log10MLS		 -0.11 0.11 -0.23 0.13 0.55 -0.14 -
Pearson p-value
(two tailed)		 8.35E-01 8.35E-01 6.66E-01 8.12E-01 2.54E-01 7.87E-01 -
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Stats for ND6 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.1 - 42.0% 58.0 - 60.9% 160 - 171 42 - 53 85 - 100 209 - 221 12.0 - 50.0
Median 41.4% 59.4% 167 45 94 218 29.0
Average ± stdev 40.7 ± 1.2% 59.3 ± 1.2% 165 ± 4 46 ± 3 92 ± 5 216 ± 3 27.3 ± 12.0
Coefficient of variation 0.03 0.02 0.02 0.08 0.06 0.02 0.44
Pearson correlation
coefficient with log10MLS		 0.17 -0.17 0.07 0.17 -0.09 -0.14 -
Pearson p-value
(two tailed)		 7.51E-01 7.51E-01 8.98E-01 7.43E-01 8.72E-01 7.96E-01 -
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Stats for 12S rRNA gene (group size: 7 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.2 - 43.3% 56.7 - 58.8% 215 - 230 171 - 185 224 - 233 319 - 334 12.0 - 50.0
Median 42.3% 57.7% 222 180 228 322 25.0
Average ± stdev 42.1 ± 0.8% 57.9 ± 0.8% 223 ± 4 179 ± 4 228 ± 3 324 ± 5 27.0 ± 11.2
Coefficient of variation 0.02 0.01 0.02 0.02 0.01 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.25 -0.25 -0.07 0.52 0.48 -0.61 -
Pearson p-value
(two tailed)		 5.84E-01 5.84E-01 8.75E-01 2.29E-01 2.79E-01 1.46E-01 -
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Stats for 16S rRNA gene (group size: 7 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 36.3 - 38.7% 61.3 - 63.7% 335 - 354 271 - 293 433 - 451 590 - 611 12.0 - 50.0
Median 37.5% 62.5% 346 284 440 604 25.0
Average ± stdev 37.6 ± 0.8% 62.4 ± 0.8% 344 ± 7 282 ± 6 440 ± 5 601 ± 7 27.0 ± 11.2
Coefficient of variation 0.02 0.01 0.02 0.02 0.01 0.01 0.41
Pearson correlation
coefficient with log10MLS		 0.07 -0.07 0.01 0.11 -0.11 -0.07 -
Pearson p-value
(two tailed)		 8.74E-01 8.74E-01 9.78E-01 8.20E-01 8.15E-01 8.79E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.